EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001019 (Gene tree)
Gene ID: 107093344
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 22161 bases
Position: chrKL652920.1:646287-668447
Accession: 107093344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000149	THUMP	PF02926.17	1.2e-10	1	1
ENSCVAP00000000150	THUMP	PF02926.17	1.2e-10	1	1
ENSCVAP00000000151	THUMP	PF02926.17	1.2e-10	1	1
ENSCVAP00000000149	UPF0020	PF01170.18	4.3e-40	1	1
ENSCVAP00000000150	UPF0020	PF01170.18	4.3e-40	1	1
ENSCVAP00000000151	UPF0020	PF01170.18	4.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015571	-	2515	XM_015388346	ENSCVAP00000000149	502 (aa)	XP_015243832	UPI0007429E86
ENSCVAT00000015572	-	2515	-	ENSCVAP00000000150	502 (aa)	-	UPI0007429E86
ENSCVAT00000015573	-	2515	-	ENSCVAP00000000151	502 (aa)	-	UPI0007429E86

Gene Model

Click here to download ENSCVAG00000001019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001019	thumpd3	92	57.380	ENSG00000134077	THUMPD3	90	59.912	Homo_sapiens
ENSCVAG00000001019	thumpd3	96	81.687	ENSAPOG00000015836	thumpd3	99	81.687	Acanthochromis_polyacanthus
ENSCVAG00000001019	thumpd3	91	58.351	ENSAMEG00000011321	THUMPD3	90	60.793	Ailuropoda_melanoleuca
ENSCVAG00000001019	thumpd3	98	79.596	ENSACIG00000020096	thumpd3	94	82.366	Amphilophus_citrinellus
ENSCVAG00000001019	thumpd3	99	80.723	ENSAOCG00000004399	thumpd3	100	81.124	Amphiprion_ocellaris
ENSCVAG00000001019	thumpd3	99	81.325	ENSAPEG00000016740	thumpd3	100	81.325	Amphiprion_percula
ENSCVAG00000001019	thumpd3	99	77.666	ENSATEG00000005345	thumpd3	94	80.430	Anabas_testudineus
ENSCVAG00000001019	thumpd3	75	64.541	ENSAPLG00000003598	THUMPD3	99	64.541	Anas_platyrhynchos
ENSCVAG00000001019	thumpd3	92	60.241	ENSACAG00000014974	THUMPD3	91	62.288	Anolis_carolinensis
ENSCVAG00000001019	thumpd3	92	55.717	ENSANAG00000002365	THUMPD3	90	59.471	Aotus_nancymaae
ENSCVAG00000001019	thumpd3	99	79.518	ENSACLG00000023333	thumpd3	100	79.317	Astatotilapia_calliptera
ENSCVAG00000001019	thumpd3	81	55.637	ENSACLG00000013504	-	86	55.637	Astatotilapia_calliptera
ENSCVAG00000001019	thumpd3	92	69.677	ENSAMXG00000015683	thumpd3	98	69.677	Astyanax_mexicanus
ENSCVAG00000001019	thumpd3	93	59.343	ENSBTAG00000003112	THUMPD3	91	61.771	Bos_taurus
ENSCVAG00000001019	thumpd3	84	36.471	WBGene00010846	M04B2.2	96	36.706	Caenorhabditis_elegans
ENSCVAG00000001019	thumpd3	93	54.938	ENSCJAG00000015949	THUMPD3	91	58.606	Callithrix_jacchus
ENSCVAG00000001019	thumpd3	73	59.055	ENSCAFG00000008060	-	93	59.055	Canis_familiaris
ENSCVAG00000001019	thumpd3	87	61.013	ENSCAFG00000005499	THUMPD3	90	61.013	Canis_familiaris
ENSCVAG00000001019	thumpd3	77	60.099	ENSCAFG00020025887	-	94	60.099	Canis_lupus_dingo
ENSCVAG00000001019	thumpd3	87	61.013	ENSCAFG00020008895	-	90	61.013	Canis_lupus_dingo
ENSCVAG00000001019	thumpd3	91	60.168	ENSCHIG00000024037	THUMPD3	90	61.978	Capra_hircus
ENSCVAG00000001019	thumpd3	89	56.681	ENSTSYG00000000159	THUMPD3	90	58.811	Carlito_syrichta
ENSCVAG00000001019	thumpd3	84	40.471	ENSCAPG00000017486	THUMPD3	84	40.706	Cavia_aperea
ENSCVAG00000001019	thumpd3	89	59.448	ENSCPOG00000033287	THUMPD3	92	59.448	Cavia_porcellus
ENSCVAG00000001019	thumpd3	89	50.759	ENSCCAG00000021429	-	92	53.153	Cebus_capucinus
ENSCVAG00000001019	thumpd3	93	55.350	ENSCCAG00000027067	-	91	59.041	Cebus_capucinus
ENSCVAG00000001019	thumpd3	93	56.996	ENSCATG00000040999	THUMPD3	91	59.477	Cercocebus_atys
ENSCVAG00000001019	thumpd3	88	59.914	ENSCLAG00000000690	THUMPD3	91	59.914	Chinchilla_lanigera
ENSCVAG00000001019	thumpd3	92	57.173	ENSCSAG00000010753	THUMPD3	91	59.259	Chlorocebus_sabaeus
ENSCVAG00000001019	thumpd3	74	50.584	ENSCHOG00000012851	THUMPD3	74	50.584	Choloepus_hoffmanni
ENSCVAG00000001019	thumpd3	91	60.905	ENSCPBG00000014771	THUMPD3	92	62.607	Chrysemys_picta_bellii
ENSCVAG00000001019	thumpd3	87	40.590	ENSCSAVG00000008668	-	97	40.590	Ciona_savignyi
ENSCVAG00000001019	thumpd3	92	56.965	ENSCANG00000031901	THUMPD3	91	59.041	Colobus_angolensis_palliatus
ENSCVAG00000001019	thumpd3	87	60.394	ENSCGRG00001024117	Thumpd3	90	61.538	Cricetulus_griseus_chok1gshd
ENSCVAG00000001019	thumpd3	87	60.394	ENSCGRG00000018116	Thumpd3	90	61.538	Cricetulus_griseus_crigri
ENSCVAG00000001019	thumpd3	94	76.471	ENSCSEG00000002546	thumpd3	96	77.802	Cynoglossus_semilaevis
ENSCVAG00000001019	thumpd3	91	66.311	ENSDARG00000059634	thumpd3	98	66.311	Danio_rerio
ENSCVAG00000001019	thumpd3	88	59.130	ENSDNOG00000047668	THUMPD3	88	61.099	Dasypus_novemcinctus
ENSCVAG00000001019	thumpd3	87	61.589	ENSDORG00000003257	Thumpd3	90	61.589	Dipodomys_ordii
ENSCVAG00000001019	thumpd3	57	57.096	ENSETEG00000020239	-	60	57.096	Echinops_telfairi
ENSCVAG00000001019	thumpd3	85	52.164	ENSEBUG00000004221	thumpd3	99	50.820	Eptatretus_burgeri
ENSCVAG00000001019	thumpd3	91	57.113	ENSEASG00005013327	THUMPD3	90	60.619	Equus_asinus_asinus
ENSCVAG00000001019	thumpd3	91	59.205	ENSECAG00000002016	THUMPD3	90	62.832	Equus_caballus
ENSCVAG00000001019	thumpd3	93	53.527	ENSEEUG00000014696	THUMPD3	91	55.120	Erinaceus_europaeus
ENSCVAG00000001019	thumpd3	84	83.893	ENSELUG00000018246	thumpd3	81	85.714	Esox_lucius
ENSCVAG00000001019	thumpd3	91	59.579	ENSFCAG00000006171	THUMPD3	90	61.589	Felis_catus
ENSCVAG00000001019	thumpd3	82	58.447	ENSFALG00000013631	THUMPD3	90	58.986	Ficedula_albicollis
ENSCVAG00000001019	thumpd3	87	59.607	ENSFDAG00000014825	THUMPD3	90	61.978	Fukomys_damarensis
ENSCVAG00000001019	thumpd3	98	85.081	ENSFHEG00000006006	thumpd3	99	85.081	Fundulus_heteroclitus
ENSCVAG00000001019	thumpd3	96	68.313	ENSGMOG00000007923	thumpd3	95	70.021	Gadus_morhua
ENSCVAG00000001019	thumpd3	90	57.320	ENSGALG00000044813	THUMPD3	93	61.255	Gallus_gallus
ENSCVAG00000001019	thumpd3	98	86.318	ENSGAFG00000021645	thumpd3	99	86.318	Gambusia_affinis
ENSCVAG00000001019	thumpd3	93	79.355	ENSGACG00000000930	thumpd3	99	79.355	Gasterosteus_aculeatus
ENSCVAG00000001019	thumpd3	91	60.494	ENSGAGG00000022750	THUMPD3	92	61.311	Gopherus_agassizii
ENSCVAG00000001019	thumpd3	92	57.173	ENSGGOG00000000604	THUMPD3	90	59.692	Gorilla_gorilla
ENSCVAG00000001019	thumpd3	99	79.518	ENSHBUG00000013405	thumpd3	100	79.317	Haplochromis_burtoni
ENSCVAG00000001019	thumpd3	88	59.091	ENSHGLG00000016200	THUMPD3	91	59.957	Heterocephalus_glaber_female
ENSCVAG00000001019	thumpd3	88	59.307	ENSHGLG00100017321	-	91	60.173	Heterocephalus_glaber_male
ENSCVAG00000001019	thumpd3	86	53.691	ENSHGLG00100000505	-	92	53.691	Heterocephalus_glaber_male
ENSCVAG00000001019	thumpd3	92	76.660	ENSHCOG00000004871	thumpd3	97	76.660	Hippocampus_comes
ENSCVAG00000001019	thumpd3	89	71.556	ENSIPUG00000019415	THUMPD3	92	71.556	Ictalurus_punctatus
ENSCVAG00000001019	thumpd3	87	61.810	ENSSTOG00000003973	THUMPD3	90	61.810	Ictidomys_tridecemlineatus
ENSCVAG00000001019	thumpd3	90	55.128	ENSJJAG00000017751	Thumpd3	88	56.071	Jaculus_jaculus
ENSCVAG00000001019	thumpd3	99	78.226	ENSKMAG00000021025	thumpd3	89	81.545	Kryptolebias_marmoratus
ENSCVAG00000001019	thumpd3	98	80.000	ENSLBEG00000012252	thumpd3	99	80.000	Labrus_bergylta
ENSCVAG00000001019	thumpd3	87	62.092	ENSLACG00000018604	THUMPD3	90	62.092	Latimeria_chalumnae
ENSCVAG00000001019	thumpd3	91	61.323	ENSLOCG00000009800	thumpd3	94	64.147	Lepisosteus_oculatus
ENSCVAG00000001019	thumpd3	88	60.087	ENSLAFG00000005103	THUMPD3	91	61.388	Loxodonta_africana
ENSCVAG00000001019	thumpd3	92	57.173	ENSMFAG00000044884	THUMPD3	90	59.692	Macaca_fascicularis
ENSCVAG00000001019	thumpd3	92	57.173	ENSMMUG00000017307	THUMPD3	90	59.692	Macaca_mulatta
ENSCVAG00000001019	thumpd3	92	57.173	ENSMNEG00000030529	THUMPD3	90	59.692	Macaca_nemestrina
ENSCVAG00000001019	thumpd3	93	56.996	ENSMLEG00000032943	THUMPD3	91	59.477	Mandrillus_leucophaeus
ENSCVAG00000001019	thumpd3	93	79.570	ENSMAMG00000023934	thumpd3	95	79.744	Mastacembelus_armatus
ENSCVAG00000001019	thumpd3	99	79.518	ENSMZEG00005010623	thumpd3	100	79.317	Maylandia_zebra
ENSCVAG00000001019	thumpd3	77	62.155	ENSMGAG00000010182	THUMPD3	100	62.155	Meleagris_gallopavo
ENSCVAG00000001019	thumpd3	92	59.298	ENSMAUG00000012250	Thumpd3	90	61.623	Mesocricetus_auratus
ENSCVAG00000001019	thumpd3	93	55.000	ENSMICG00000010095	THUMPD3	89	57.112	Microcebus_murinus
ENSCVAG00000001019	thumpd3	87	61.369	ENSMOCG00000020148	Thumpd3	90	61.369	Microtus_ochrogaster
ENSCVAG00000001019	thumpd3	92	79.393	ENSMMOG00000021791	thumpd3	94	81.292	Mola_mola
ENSCVAG00000001019	thumpd3	91	56.198	ENSMODG00000004715	-	91	59.483	Monodelphis_domestica
ENSCVAG00000001019	thumpd3	93	78.723	ENSMALG00000017316	thumpd3	93	81.591	Monopterus_albus
ENSCVAG00000001019	thumpd3	52	57.500	MGP_CAROLIEiJ_G0028714	-	58	57.500	Mus_caroli
ENSCVAG00000001019	thumpd3	89	61.242	ENSMUSG00000030264	Thumpd3	92	61.242	Mus_musculus
ENSCVAG00000001019	thumpd3	89	61.456	MGP_PahariEiJ_G0022465	Thumpd3	92	61.456	Mus_pahari
ENSCVAG00000001019	thumpd3	89	61.670	MGP_SPRETEiJ_G0029742	Thumpd3	92	61.670	Mus_spretus
ENSCVAG00000001019	thumpd3	90	55.292	ENSMPUG00000005219	-	90	56.347	Mustela_putorius_furo
ENSCVAG00000001019	thumpd3	87	60.398	ENSMPUG00000017066	-	90	61.726	Mustela_putorius_furo
ENSCVAG00000001019	thumpd3	94	55.804	ENSMLUG00000008538	THUMPD3	92	58.635	Myotis_lucifugus
ENSCVAG00000001019	thumpd3	87	61.454	ENSNGAG00000021014	-	90	61.454	Nannospalax_galili
ENSCVAG00000001019	thumpd3	87	51.126	ENSNGAG00000001549	-	89	51.802	Nannospalax_galili
ENSCVAG00000001019	thumpd3	99	79.317	ENSNBRG00000004886	thumpd3	100	79.317	Neolamprologus_brichardi
ENSCVAG00000001019	thumpd3	93	56.996	ENSNLEG00000003863	THUMPD3	91	59.477	Nomascus_leucogenys
ENSCVAG00000001019	thumpd3	77	60.000	ENSMEUG00000009819	THUMPD3	96	60.247	Notamacropus_eugenii
ENSCVAG00000001019	thumpd3	78	60.827	ENSOPRG00000002020	THUMPD3	98	60.827	Ochotona_princeps
ENSCVAG00000001019	thumpd3	67	56.145	ENSODEG00000018242	THUMPD3	100	58.217	Octodon_degus
ENSCVAG00000001019	thumpd3	93	81.585	ENSONIG00000018977	thumpd3	94	81.585	Oreochromis_niloticus
ENSCVAG00000001019	thumpd3	78	56.459	ENSOANG00000014481	THUMPD3	97	57.177	Ornithorhynchus_anatinus
ENSCVAG00000001019	thumpd3	88	60.784	ENSOCUG00000010921	THUMPD3	90	62.092	Oryctolagus_cuniculus
ENSCVAG00000001019	thumpd3	98	76.518	ENSORLG00000000676	thumpd3	94	80.217	Oryzias_latipes
ENSCVAG00000001019	thumpd3	98	76.923	ENSORLG00020007509	thumpd3	94	80.652	Oryzias_latipes_hni
ENSCVAG00000001019	thumpd3	98	77.126	ENSORLG00015003615	thumpd3	94	80.870	Oryzias_latipes_hsok
ENSCVAG00000001019	thumpd3	98	75.304	ENSOMEG00000014115	thumpd3	94	79.565	Oryzias_melastigma
ENSCVAG00000001019	thumpd3	77	58.621	ENSOGAG00000017111	THUMPD3	99	58.621	Otolemur_garnettii
ENSCVAG00000001019	thumpd3	96	57.853	ENSOARG00000007139	THUMPD3	93	59.459	Ovis_aries
ENSCVAG00000001019	thumpd3	92	57.588	ENSPPAG00000025852	THUMPD3	90	60.132	Pan_paniscus
ENSCVAG00000001019	thumpd3	91	59.789	ENSPPRG00000008071	THUMPD3	90	61.810	Panthera_pardus
ENSCVAG00000001019	thumpd3	91	59.579	ENSPTIG00000017923	THUMPD3	90	61.589	Panthera_tigris_altaica
ENSCVAG00000001019	thumpd3	92	57.380	ENSPTRG00000014585	THUMPD3	90	59.912	Pan_troglodytes
ENSCVAG00000001019	thumpd3	92	56.965	ENSPANG00000016253	THUMPD3	91	59.041	Papio_anubis
ENSCVAG00000001019	thumpd3	89	69.214	ENSPKIG00000014009	thumpd3	93	69.214	Paramormyrops_kingsleyae
ENSCVAG00000001019	thumpd3	92	57.992	ENSPSIG00000007370	THUMPD3	91	60.000	Pelodiscus_sinensis
ENSCVAG00000001019	thumpd3	95	74.486	ENSPMGG00000017563	thumpd3	97	76.110	Periophthalmus_magnuspinnatus
ENSCVAG00000001019	thumpd3	87	61.148	ENSPEMG00000022411	Thumpd3	90	61.148	Peromyscus_maniculatus_bairdii
ENSCVAG00000001019	thumpd3	86	53.986	ENSPMAG00000001291	thumpd3	98	54.214	Petromyzon_marinus
ENSCVAG00000001019	thumpd3	87	58.824	ENSPCIG00000002049	THUMPD3	90	59.041	Phascolarctos_cinereus
ENSCVAG00000001019	thumpd3	98	85.685	ENSPFOG00000002318	thumpd3	99	85.685	Poecilia_formosa
ENSCVAG00000001019	thumpd3	98	85.685	ENSPLAG00000014804	thumpd3	99	85.685	Poecilia_latipinna
ENSCVAG00000001019	thumpd3	98	85.685	ENSPMEG00000000582	thumpd3	99	85.685	Poecilia_mexicana
ENSCVAG00000001019	thumpd3	98	85.571	ENSPREG00000009176	thumpd3	99	85.571	Poecilia_reticulata
ENSCVAG00000001019	thumpd3	86	45.413	ENSPPYG00000017616	-	89	45.413	Pongo_abelii
ENSCVAG00000001019	thumpd3	93	56.996	ENSPPYG00000029461	THUMPD3	91	59.477	Pongo_abelii
ENSCVAG00000001019	thumpd3	80	58.852	ENSPCAG00000015398	THUMPD3	99	60.432	Procavia_capensis
ENSCVAG00000001019	thumpd3	82	51.981	ENSPCOG00000023618	-	92	54.094	Propithecus_coquereli
ENSCVAG00000001019	thumpd3	92	49.064	ENSPCOG00000018095	-	90	52.643	Propithecus_coquereli
ENSCVAG00000001019	thumpd3	92	58.628	ENSPVAG00000008721	THUMPD3	91	60.566	Pteropus_vampyrus
ENSCVAG00000001019	thumpd3	99	79.518	ENSPNYG00000006918	thumpd3	100	79.317	Pundamilia_nyererei
ENSCVAG00000001019	thumpd3	92	69.247	ENSPNAG00000014936	thumpd3	96	69.247	Pygocentrus_nattereri
ENSCVAG00000001019	thumpd3	87	62.198	ENSRNOG00000006941	Thumpd3	90	62.198	Rattus_norvegicus
ENSCVAG00000001019	thumpd3	94	56.879	ENSRBIG00000035954	THUMPD3	92	59.348	Rhinopithecus_bieti
ENSCVAG00000001019	thumpd3	94	56.674	ENSRROG00000035734	THUMPD3	92	59.130	Rhinopithecus_roxellana
ENSCVAG00000001019	thumpd3	93	55.464	ENSSBOG00000023567	THUMPD3	92	59.865	Saimiri_boliviensis_boliviensis
ENSCVAG00000001019	thumpd3	90	57.415	ENSSHAG00000014467	THUMPD3	93	58.051	Sarcophilus_harrisii
ENSCVAG00000001019	thumpd3	93	67.983	ENSSFOG00015019210	thumpd3	95	67.983	Scleropages_formosus
ENSCVAG00000001019	thumpd3	98	77.485	ENSSMAG00000000609	thumpd3	97	80.258	Scophthalmus_maximus
ENSCVAG00000001019	thumpd3	99	78.831	ENSSDUG00000012179	thumpd3	98	82.013	Seriola_dumerili
ENSCVAG00000001019	thumpd3	99	79.032	ENSSLDG00000022028	thumpd3	95	82.013	Seriola_lalandi_dorsalis
ENSCVAG00000001019	thumpd3	77	66.883	ENSSARG00000002239	THUMPD3	77	66.883	Sorex_araneus
ENSCVAG00000001019	thumpd3	87	60.341	ENSSPUG00000017461	THUMPD3	92	60.554	Sphenodon_punctatus
ENSCVAG00000001019	thumpd3	100	79.167	ENSSPAG00000008345	thumpd3	100	79.167	Stegastes_partitus
ENSCVAG00000001019	thumpd3	94	57.959	ENSSSCG00000011542	THUMPD3	92	61.325	Sus_scrofa
ENSCVAG00000001019	thumpd3	86	61.778	ENSTGUG00000010440	THUMPD3	100	61.778	Taeniopygia_guttata
ENSCVAG00000001019	thumpd3	94	68.499	ENSTRUG00000004420	thumpd3	96	69.783	Takifugu_rubripes
ENSCVAG00000001019	thumpd3	92	78.448	ENSTNIG00000014627	thumpd3	98	80.659	Tetraodon_nigroviridis
ENSCVAG00000001019	thumpd3	96	52.485	ENSTBEG00000003450	THUMPD3	91	55.675	Tupaia_belangeri
ENSCVAG00000001019	thumpd3	87	61.233	ENSTTRG00000009694	THUMPD3	90	61.454	Tursiops_truncatus
ENSCVAG00000001019	thumpd3	87	60.132	ENSUAMG00000009412	THUMPD3	90	61.233	Ursus_americanus
ENSCVAG00000001019	thumpd3	87	63.781	ENSUMAG00000019241	THUMPD3	90	63.781	Ursus_maritimus
ENSCVAG00000001019	thumpd3	73	57.403	ENSVPAG00000002855	THUMPD3	91	58.530	Vicugna_pacos
ENSCVAG00000001019	thumpd3	87	61.233	ENSVVUG00000025278	THUMPD3	90	61.233	Vulpes_vulpes
ENSCVAG00000001019	thumpd3	94	56.740	ENSXETG00000001447	thumpd3	91	58.511	Xenopus_tropicalis
ENSCVAG00000001019	thumpd3	96	86.885	ENSXCOG00000000159	thumpd3	98	88.437	Xiphophorus_couchianus
ENSCVAG00000001019	thumpd3	98	85.944	ENSXMAG00000001423	thumpd3	99	85.944	Xiphophorus_maculatus