EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001053 (Gene tree)
Gene ID: 107093289
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11531 bases
Position: chrKL652918.1:701780-713310
Accession: 107093289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000168	SBDS	PF01172.18	1.5e-33	1	1
ENSCVAP00000000168	SBDS_C	PF09377.10	3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015520	-	4422	XM_015388264	ENSCVAP00000000168	249 (aa)	XP_015243750	UPI0007429923

Gene Model

Click here to download ENSCVAG00000001053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001053	sbds	100	81.526	ENSG00000126524	SBDS	97	90.361	Homo_sapiens
ENSCVAG00000001053	sbds	100	94.378	ENSAPOG00000014285	sbds	100	94.378	Acanthochromis_polyacanthus
ENSCVAG00000001053	sbds	100	81.526	ENSAMEG00000018167	SBDS	99	81.526	Ailuropoda_melanoleuca
ENSCVAG00000001053	sbds	100	94.444	ENSACIG00000007308	sbds	100	94.444	Amphilophus_citrinellus
ENSCVAG00000001053	sbds	100	94.779	ENSAOCG00000016770	sbds	100	94.779	Amphiprion_ocellaris
ENSCVAG00000001053	sbds	100	95.181	ENSAPEG00000015897	sbds	100	95.181	Amphiprion_percula
ENSCVAG00000001053	sbds	100	93.574	ENSATEG00000006901	sbds	100	93.574	Anabas_testudineus
ENSCVAG00000001053	sbds	83	79.612	ENSANAG00000037501	-	99	79.612	Aotus_nancymaae
ENSCVAG00000001053	sbds	93	75.325	ENSANAG00000024342	-	95	80.723	Aotus_nancymaae
ENSCVAG00000001053	sbds	100	95.582	ENSACLG00000018750	sbds	100	95.582	Astatotilapia_calliptera
ENSCVAG00000001053	sbds	100	87.149	ENSAMXG00000005361	sbds	99	87.149	Astyanax_mexicanus
ENSCVAG00000001053	sbds	100	81.928	ENSBTAG00000004051	SBDS	99	81.928	Bos_taurus
ENSCVAG00000001053	sbds	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSCVAG00000001053	sbds	100	81.526	ENSCJAG00000041007	SBDS	99	81.526	Callithrix_jacchus
ENSCVAG00000001053	sbds	100	79.681	ENSCAFG00000010797	SBDS	99	79.681	Canis_familiaris
ENSCVAG00000001053	sbds	100	81.526	ENSCAFG00020005357	SBDS	99	81.526	Canis_lupus_dingo
ENSCVAG00000001053	sbds	100	81.928	ENSCHIG00000026854	SBDS	99	81.928	Capra_hircus
ENSCVAG00000001053	sbds	100	81.526	ENSTSYG00000033822	SBDS	99	81.526	Carlito_syrichta
ENSCVAG00000001053	sbds	65	79.141	ENSCAPG00000006634	SBDS	99	79.141	Cavia_aperea
ENSCVAG00000001053	sbds	100	82.731	ENSCPOG00000036143	SBDS	99	82.731	Cavia_porcellus
ENSCVAG00000001053	sbds	100	81.526	ENSCCAG00000020671	SBDS	93	90.361	Cebus_capucinus
ENSCVAG00000001053	sbds	100	81.526	ENSCATG00000039026	SBDS	99	81.526	Cercocebus_atys
ENSCVAG00000001053	sbds	100	83.133	ENSCLAG00000005721	-	99	83.133	Chinchilla_lanigera
ENSCVAG00000001053	sbds	99	58.871	ENSCLAG00000002113	-	99	58.871	Chinchilla_lanigera
ENSCVAG00000001053	sbds	100	81.526	ENSCSAG00000018275	SBDS	99	81.526	Chlorocebus_sabaeus
ENSCVAG00000001053	sbds	100	76.707	ENSCHOG00000003795	SBDS	99	76.707	Choloepus_hoffmanni
ENSCVAG00000001053	sbds	100	83.534	ENSCPBG00000014893	SBDS	99	83.534	Chrysemys_picta_bellii
ENSCVAG00000001053	sbds	99	68.952	ENSCSAVG00000011811	-	99	68.952	Ciona_savignyi
ENSCVAG00000001053	sbds	100	81.124	ENSCANG00000032368	SBDS	99	81.124	Colobus_angolensis_palliatus
ENSCVAG00000001053	sbds	65	79.141	ENSCGRG00001019886	Sbds	99	79.141	Cricetulus_griseus_chok1gshd
ENSCVAG00000001053	sbds	83	81.068	ENSCGRG00000009211	Sbds	99	81.068	Cricetulus_griseus_crigri
ENSCVAG00000001053	sbds	100	91.968	ENSCSEG00000005798	sbds	100	91.968	Cynoglossus_semilaevis
ENSCVAG00000001053	sbds	100	85.944	ENSDARG00000027803	sbds	99	85.944	Danio_rerio
ENSCVAG00000001053	sbds	100	81.928	ENSDNOG00000041174	SBDS	99	81.928	Dasypus_novemcinctus
ENSCVAG00000001053	sbds	100	83.936	ENSDORG00000026218	Sbds	99	83.936	Dipodomys_ordii
ENSCVAG00000001053	sbds	91	62.719	FBgn0035714	CG8549	98	61.134	Drosophila_melanogaster
ENSCVAG00000001053	sbds	93	59.052	ENSEBUG00000015780	sbds	99	59.052	Eptatretus_burgeri
ENSCVAG00000001053	sbds	100	81.526	ENSEASG00005008821	SBDS	99	81.526	Equus_asinus_asinus
ENSCVAG00000001053	sbds	100	81.526	ENSECAG00000008202	SBDS	99	81.526	Equus_caballus
ENSCVAG00000001053	sbds	84	61.538	ENSEEUG00000004768	SBDS	95	62.944	Erinaceus_europaeus
ENSCVAG00000001053	sbds	100	89.157	ENSELUG00000008382	sbds	99	89.157	Esox_lucius
ENSCVAG00000001053	sbds	100	81.526	ENSFCAG00000022142	SBDS	99	81.526	Felis_catus
ENSCVAG00000001053	sbds	100	85.542	ENSFALG00000013808	SBDS	99	85.542	Ficedula_albicollis
ENSCVAG00000001053	sbds	100	82.731	ENSFDAG00000018947	-	99	82.731	Fukomys_damarensis
ENSCVAG00000001053	sbds	100	92.369	ENSFHEG00000000708	sbds	100	92.369	Fundulus_heteroclitus
ENSCVAG00000001053	sbds	100	89.157	ENSGMOG00000018356	sbds	99	89.157	Gadus_morhua
ENSCVAG00000001053	sbds	100	82.329	ENSGALG00000027989	SBDS	99	82.329	Gallus_gallus
ENSCVAG00000001053	sbds	92	93.043	ENSGAFG00000014204	sbds	100	93.043	Gambusia_affinis
ENSCVAG00000001053	sbds	100	90.763	ENSGACG00000012697	sbds	100	90.763	Gasterosteus_aculeatus
ENSCVAG00000001053	sbds	86	84.038	ENSGAGG00000022402	SBDS	99	84.038	Gopherus_agassizii
ENSCVAG00000001053	sbds	96	63.333	ENSGGOG00000040023	-	92	63.333	Gorilla_gorilla
ENSCVAG00000001053	sbds	100	95.582	ENSHBUG00000002660	sbds	100	95.582	Haplochromis_burtoni
ENSCVAG00000001053	sbds	100	81.124	ENSHGLG00000009671	SBDS	99	81.124	Heterocephalus_glaber_female
ENSCVAG00000001053	sbds	100	81.124	ENSHGLG00100011332	SBDS	99	81.124	Heterocephalus_glaber_male
ENSCVAG00000001053	sbds	100	88.755	ENSHCOG00000018606	sbds	100	88.755	Hippocampus_comes
ENSCVAG00000001053	sbds	100	86.747	ENSIPUG00000006536	sbds	99	86.747	Ictalurus_punctatus
ENSCVAG00000001053	sbds	100	59.127	ENSJJAG00000003934	-	99	59.600	Jaculus_jaculus
ENSCVAG00000001053	sbds	99	80.162	ENSJJAG00000012033	-	99	79.518	Jaculus_jaculus
ENSCVAG00000001053	sbds	100	95.181	ENSKMAG00000018542	sbds	100	95.181	Kryptolebias_marmoratus
ENSCVAG00000001053	sbds	100	91.165	ENSLBEG00000016687	sbds	100	91.165	Labrus_bergylta
ENSCVAG00000001053	sbds	100	71.146	ENSLACG00000018916	SBDS	99	71.146	Latimeria_chalumnae
ENSCVAG00000001053	sbds	100	87.149	ENSLOCG00000004073	sbds	99	87.149	Lepisosteus_oculatus
ENSCVAG00000001053	sbds	100	81.928	ENSLAFG00000008763	SBDS	99	81.928	Loxodonta_africana
ENSCVAG00000001053	sbds	100	81.526	ENSMFAG00000032620	SBDS	99	81.526	Macaca_fascicularis
ENSCVAG00000001053	sbds	100	81.526	ENSMMUG00000045653	SBDS	99	81.526	Macaca_mulatta
ENSCVAG00000001053	sbds	100	81.526	ENSMNEG00000031523	SBDS	99	81.526	Macaca_nemestrina
ENSCVAG00000001053	sbds	100	65.613	ENSMLEG00000036826	SBDS	99	63.636	Mandrillus_leucophaeus
ENSCVAG00000001053	sbds	100	94.378	ENSMAMG00000016062	sbds	100	94.378	Mastacembelus_armatus
ENSCVAG00000001053	sbds	100	95.582	ENSMZEG00005024385	sbds	100	95.582	Maylandia_zebra
ENSCVAG00000001053	sbds	100	82.329	ENSMGAG00000002119	SBDS	99	82.329	Meleagris_gallopavo
ENSCVAG00000001053	sbds	100	67.470	ENSMAUG00000022214	-	100	67.470	Mesocricetus_auratus
ENSCVAG00000001053	sbds	100	81.928	ENSMICG00000014366	SBDS	99	81.928	Microcebus_murinus
ENSCVAG00000001053	sbds	100	82.329	ENSMOCG00000011739	Sbds	99	82.329	Microtus_ochrogaster
ENSCVAG00000001053	sbds	100	81.600	ENSMMOG00000005061	sbds	100	81.600	Mola_mola
ENSCVAG00000001053	sbds	100	83.534	ENSMODG00000006644	SBDS	99	83.534	Monodelphis_domestica
ENSCVAG00000001053	sbds	100	89.960	ENSMALG00000010219	sbds	100	89.960	Monopterus_albus
ENSCVAG00000001053	sbds	100	83.133	MGP_CAROLIEiJ_G0027800	Sbds	98	95.238	Mus_caroli
ENSCVAG00000001053	sbds	100	83.534	ENSMUSG00000025337	Sbds	98	95.238	Mus_musculus
ENSCVAG00000001053	sbds	100	83.133	MGP_PahariEiJ_G0024384	Sbds	98	95.238	Mus_pahari
ENSCVAG00000001053	sbds	100	83.534	MGP_SPRETEiJ_G0028798	Sbds	98	95.238	Mus_spretus
ENSCVAG00000001053	sbds	67	80.240	ENSMPUG00000016192	SBDS	96	80.240	Mustela_putorius_furo
ENSCVAG00000001053	sbds	73	75.691	ENSMLUG00000013575	SBDS	99	75.691	Myotis_lucifugus
ENSCVAG00000001053	sbds	100	83.133	ENSNGAG00000012093	Sbds	99	83.133	Nannospalax_galili
ENSCVAG00000001053	sbds	100	95.582	ENSNBRG00000017027	sbds	100	95.582	Neolamprologus_brichardi
ENSCVAG00000001053	sbds	100	81.526	ENSNLEG00000013288	SBDS	99	81.526	Nomascus_leucogenys
ENSCVAG00000001053	sbds	100	83.534	ENSOPRG00000008721	SBDS	99	83.534	Ochotona_princeps
ENSCVAG00000001053	sbds	100	74.297	ENSODEG00000019253	-	84	74.297	Octodon_degus
ENSCVAG00000001053	sbds	100	61.847	ENSODEG00000000137	-	84	64.659	Octodon_degus
ENSCVAG00000001053	sbds	100	64.257	ENSODEG00000001116	-	99	64.257	Octodon_degus
ENSCVAG00000001053	sbds	100	95.582	ENSONIG00000005874	sbds	100	95.582	Oreochromis_niloticus
ENSCVAG00000001053	sbds	83	80.097	ENSOANG00000007674	-	99	80.882	Ornithorhynchus_anatinus
ENSCVAG00000001053	sbds	100	83.534	ENSOCUG00000003170	SBDS	99	83.534	Oryctolagus_cuniculus
ENSCVAG00000001053	sbds	100	91.165	ENSORLG00000023489	sbds	100	91.165	Oryzias_latipes
ENSCVAG00000001053	sbds	100	90.763	ENSORLG00020019282	sbds	100	90.763	Oryzias_latipes_hni
ENSCVAG00000001053	sbds	100	90.763	ENSORLG00015008005	sbds	100	90.763	Oryzias_latipes_hsok
ENSCVAG00000001053	sbds	100	92.369	ENSOMEG00000022747	sbds	100	92.369	Oryzias_melastigma
ENSCVAG00000001053	sbds	100	82.329	ENSOGAG00000009011	-	99	82.329	Otolemur_garnettii
ENSCVAG00000001053	sbds	100	71.084	ENSOGAG00000015036	-	99	71.084	Otolemur_garnettii
ENSCVAG00000001053	sbds	100	81.928	ENSOARG00000010609	SBDS	99	81.928	Ovis_aries
ENSCVAG00000001053	sbds	100	80.723	ENSPPAG00000043889	-	99	80.723	Pan_paniscus
ENSCVAG00000001053	sbds	100	81.526	ENSPPRG00000002307	SBDS	99	81.526	Panthera_pardus
ENSCVAG00000001053	sbds	100	81.526	ENSPTIG00000021308	SBDS	99	81.526	Panthera_tigris_altaica
ENSCVAG00000001053	sbds	100	67.871	ENSPTRG00000047744	-	99	67.871	Pan_troglodytes
ENSCVAG00000001053	sbds	87	79.263	ENSPTRG00000048174	-	88	83.249	Pan_troglodytes
ENSCVAG00000001053	sbds	100	67.871	ENSPTRG00000050835	-	99	67.871	Pan_troglodytes
ENSCVAG00000001053	sbds	100	81.526	ENSPTRG00000019254	SBDS	99	81.526	Pan_troglodytes
ENSCVAG00000001053	sbds	100	81.526	ENSPANG00000004078	SBDS	99	81.526	Papio_anubis
ENSCVAG00000001053	sbds	100	89.558	ENSPKIG00000006489	sbds	99	89.558	Paramormyrops_kingsleyae
ENSCVAG00000001053	sbds	83	81.643	ENSPSIG00000014603	SBDS	99	81.643	Pelodiscus_sinensis
ENSCVAG00000001053	sbds	100	93.574	ENSPMGG00000004246	sbds	100	93.574	Periophthalmus_magnuspinnatus
ENSCVAG00000001053	sbds	100	83.133	ENSPEMG00000008728	Sbds	99	83.133	Peromyscus_maniculatus_bairdii
ENSCVAG00000001053	sbds	100	83.534	ENSPCIG00000029718	SBDS	99	83.534	Phascolarctos_cinereus
ENSCVAG00000001053	sbds	100	95.582	ENSPFOG00000015837	sbds	100	95.582	Poecilia_formosa
ENSCVAG00000001053	sbds	100	95.984	ENSPLAG00000003641	sbds	100	95.984	Poecilia_latipinna
ENSCVAG00000001053	sbds	100	95.582	ENSPMEG00000019483	sbds	100	95.582	Poecilia_mexicana
ENSCVAG00000001053	sbds	100	94.779	ENSPREG00000018758	sbds	100	94.779	Poecilia_reticulata
ENSCVAG00000001053	sbds	100	81.526	ENSPPYG00000017513	SBDS	99	81.526	Pongo_abelii
ENSCVAG00000001053	sbds	100	81.526	ENSPCOG00000021098	SBDS	99	81.526	Propithecus_coquereli
ENSCVAG00000001053	sbds	100	81.928	ENSPVAG00000009369	SBDS	99	81.928	Pteropus_vampyrus
ENSCVAG00000001053	sbds	100	95.181	ENSPNYG00000022403	sbds	100	95.181	Pundamilia_nyererei
ENSCVAG00000001053	sbds	100	89.960	ENSPNAG00000001120	sbds	99	89.960	Pygocentrus_nattereri
ENSCVAG00000001053	sbds	100	83.133	ENSRNOG00000000888	Sbds	99	83.133	Rattus_norvegicus
ENSCVAG00000001053	sbds	100	81.526	ENSRBIG00000035557	SBDS	99	81.526	Rhinopithecus_bieti
ENSCVAG00000001053	sbds	100	67.871	ENSRROG00000041986	-	99	67.871	Rhinopithecus_roxellana
ENSCVAG00000001053	sbds	100	81.526	ENSRROG00000040842	-	99	81.526	Rhinopithecus_roxellana
ENSCVAG00000001053	sbds	92	43.882	YLR022C	-	94	41.949	Saccharomyces_cerevisiae
ENSCVAG00000001053	sbds	93	79.654	ENSSBOG00000022460	SBDS	99	79.654	Saimiri_boliviensis_boliviensis
ENSCVAG00000001053	sbds	100	71.888	ENSSHAG00000010263	SBDS	99	71.888	Sarcophilus_harrisii
ENSCVAG00000001053	sbds	100	88.755	ENSSFOG00015001108	sbds	99	88.755	Scleropages_formosus
ENSCVAG00000001053	sbds	100	92.369	ENSSMAG00000020506	sbds	100	92.369	Scophthalmus_maximus
ENSCVAG00000001053	sbds	100	92.771	ENSSDUG00000001528	sbds	100	92.771	Seriola_dumerili
ENSCVAG00000001053	sbds	100	92.369	ENSSLDG00000003659	sbds	100	92.369	Seriola_lalandi_dorsalis
ENSCVAG00000001053	sbds	61	88.235	ENSSARG00000013132	-	100	88.235	Sorex_araneus
ENSCVAG00000001053	sbds	73	90.698	ENSSARG00000001899	-	73	90.698	Sorex_araneus
ENSCVAG00000001053	sbds	100	81.928	ENSSPUG00000002699	SBDS	99	81.928	Sphenodon_punctatus
ENSCVAG00000001053	sbds	100	95.181	ENSSPAG00000016419	sbds	100	87.200	Stegastes_partitus
ENSCVAG00000001053	sbds	100	81.928	ENSSSCG00000007732	SBDS	99	81.928	Sus_scrofa
ENSCVAG00000001053	sbds	66	84.146	ENSTGUG00000003426	SBDS	99	84.146	Taeniopygia_guttata
ENSCVAG00000001053	sbds	100	93.574	ENSTRUG00000021443	sbds	100	93.574	Takifugu_rubripes
ENSCVAG00000001053	sbds	100	92.771	ENSTNIG00000019000	sbds	100	92.771	Tetraodon_nigroviridis
ENSCVAG00000001053	sbds	84	70.192	ENSTBEG00000001178	SBDS	94	71.574	Tupaia_belangeri
ENSCVAG00000001053	sbds	100	64.257	ENSTTRG00000003921	SBDS	99	64.257	Tursiops_truncatus
ENSCVAG00000001053	sbds	100	81.526	ENSUAMG00000001326	SBDS	99	81.526	Ursus_americanus
ENSCVAG00000001053	sbds	100	81.526	ENSUMAG00000015353	SBDS	99	81.526	Ursus_maritimus
ENSCVAG00000001053	sbds	100	81.526	ENSVVUG00000016478	SBDS	99	81.526	Vulpes_vulpes
ENSCVAG00000001053	sbds	100	82.731	ENSXETG00000010093	sbds	99	82.731	Xenopus_tropicalis
ENSCVAG00000001053	sbds	100	83.133	ENSXCOG00000010639	sbds	100	83.133	Xiphophorus_couchianus
ENSCVAG00000001053	sbds	100	94.779	ENSXMAG00000006065	sbds	100	94.779	Xiphophorus_maculatus