EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001167 (Gene tree)
Gene ID: 107100345
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: uncharacterized LOC107100345
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11999 bases
Position: chrKL652529.1:1784553-1796551
Accession: 107100345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000264	MBD	PF01429.19	1.1e-13	1	1
ENSCVAP00000000278	MBD	PF01429.19	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015351	-	4691	XM_015398799	ENSCVAP00000000264	823 (aa)	XP_015254285	UPI00074264CA
ENSCVAT00000015349	-	4763	-	ENSCVAP00000000278	847 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000001167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001167	mbd1b	99	65.704	ENSAPOG00000012810	mbd1b	99	65.742	Acanthochromis_polyacanthus
ENSCVAG00000001167	mbd1b	97	56.089	ENSACIG00000010590	mbd1b	97	55.018	Amphilophus_citrinellus
ENSCVAG00000001167	mbd1b	99	67.594	ENSAOCG00000020272	mbd1b	99	67.352	Amphiprion_ocellaris
ENSCVAG00000001167	mbd1b	99	67.150	ENSAPEG00000023230	mbd1b	99	66.908	Amphiprion_percula
ENSCVAG00000001167	mbd1b	99	64.916	ENSATEG00000009608	mbd1b	99	65.036	Anabas_testudineus
ENSCVAG00000001167	mbd1b	99	63.015	ENSACLG00000021383	mbd1b	99	63.270	Astatotilapia_calliptera
ENSCVAG00000001167	mbd1b	52	32.251	ENSCATG00000029959	MBD1	54	56.923	Cercocebus_atys
ENSCVAG00000001167	mbd1b	98	54.925	ENSCSEG00000009082	mbd1b	99	55.116	Cynoglossus_semilaevis
ENSCVAG00000001167	mbd1b	92	37.095	ENSDARG00000025699	mbd1b	82	37.212	Danio_rerio
ENSCVAG00000001167	mbd1b	51	31.616	ENSEASG00005003857	MBD1	51	50.538	Equus_asinus_asinus
ENSCVAG00000001167	mbd1b	91	45.340	ENSELUG00000004375	mbd1b	98	46.404	Esox_lucius
ENSCVAG00000001167	mbd1b	100	79.394	ENSFHEG00000020120	mbd1b	100	79.394	Fundulus_heteroclitus
ENSCVAG00000001167	mbd1b	99	76.392	ENSGAFG00000008975	mbd1b	99	76.634	Gambusia_affinis
ENSCVAG00000001167	mbd1b	70	73.973	ENSGACG00000012106	-	97	73.973	Gasterosteus_aculeatus
ENSCVAG00000001167	mbd1b	99	62.898	ENSHBUG00000014270	mbd1b	99	63.507	Haplochromis_burtoni
ENSCVAG00000001167	mbd1b	98	53.014	ENSHCOG00000009952	mbd1b	99	53.014	Hippocampus_comes
ENSCVAG00000001167	mbd1b	91	36.959	ENSIPUG00000015243	-	96	37.083	Ictalurus_punctatus
ENSCVAG00000001167	mbd1b	99	67.506	ENSKMAG00000020760	mbd1b	99	67.266	Kryptolebias_marmoratus
ENSCVAG00000001167	mbd1b	65	38.650	ENSLACG00000002414	-	79	38.514	Latimeria_chalumnae
ENSCVAG00000001167	mbd1b	52	32.251	ENSMLEG00000043121	MBD1	54	56.923	Mandrillus_leucophaeus
ENSCVAG00000001167	mbd1b	78	62.883	ENSMAMG00000023341	-	95	63.994	Mastacembelus_armatus
ENSCVAG00000001167	mbd1b	99	63.133	ENSMZEG00005010421	mbd1b	99	63.389	Maylandia_zebra
ENSCVAG00000001167	mbd1b	92	83.333	ENSMMOG00000011607	mbd1b	80	83.333	Mola_mola
ENSCVAG00000001167	mbd1b	99	65.542	ENSMALG00000007808	mbd1b	99	65.060	Monopterus_albus
ENSCVAG00000001167	mbd1b	99	63.669	ENSONIG00000020289	mbd1b	99	64.024	Oreochromis_niloticus
ENSCVAG00000001167	mbd1b	99	62.840	ENSORLG00000029390	mbd1b	99	62.708	Oryzias_latipes
ENSCVAG00000001167	mbd1b	99	63.258	ENSORLG00020000575	mbd1b	99	62.827	Oryzias_latipes_hni
ENSCVAG00000001167	mbd1b	99	63.420	ENSORLG00015014812	mbd1b	99	63.108	Oryzias_latipes_hsok
ENSCVAG00000001167	mbd1b	99	62.398	ENSOMEG00000023660	mbd1b	99	61.932	Oryzias_melastigma
ENSCVAG00000001167	mbd1b	52	32.251	ENSPANG00000010867	MBD1	53	56.923	Papio_anubis
ENSCVAG00000001167	mbd1b	100	75.120	ENSPFOG00000007511	mbd1b	99	74.818	Poecilia_formosa
ENSCVAG00000001167	mbd1b	100	75.845	ENSPLAG00000021258	mbd1b	99	76.029	Poecilia_latipinna
ENSCVAG00000001167	mbd1b	100	75.937	ENSPMEG00000024145	mbd1b	99	76.121	Poecilia_mexicana
ENSCVAG00000001167	mbd1b	100	75.966	ENSPREG00000021805	mbd1b	99	76.150	Poecilia_reticulata
ENSCVAG00000001167	mbd1b	51	35.000	ENSPCOG00000012450	MBD1	52	50.000	Propithecus_coquereli
ENSCVAG00000001167	mbd1b	96	39.763	ENSPNAG00000018075	mbd1b	98	43.158	Pygocentrus_nattereri
ENSCVAG00000001167	mbd1b	79	49.091	ENSSFOG00015008591	-	64	54.717	Scleropages_formosus
ENSCVAG00000001167	mbd1b	95	62.981	ENSSMAG00000014640	mbd1b	84	62.981	Scophthalmus_maximus
ENSCVAG00000001167	mbd1b	91	68.010	ENSSDUG00000012996	mbd1b	99	62.220	Seriola_dumerili
ENSCVAG00000001167	mbd1b	72	70.857	ENSSLDG00000012422	mbd1b	93	70.857	Seriola_lalandi_dorsalis
ENSCVAG00000001167	mbd1b	99	67.711	ENSSPAG00000021447	mbd1b	99	67.711	Stegastes_partitus
ENSCVAG00000001167	mbd1b	99	56.988	ENSTRUG00000013422	mbd1b	99	57.005	Takifugu_rubripes
ENSCVAG00000001167	mbd1b	64	57.037	ENSTNIG00000007326	-	57	73.016	Tetraodon_nigroviridis
ENSCVAG00000001167	mbd1b	99	76.110	ENSXMAG00000005628	mbd1b	99	75.990	Xiphophorus_maculatus