EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001205 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 55237 bases
Position: chrKL652529.1:1144997-1200233
Accession: 107100097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000305	Surp	PF01805.20	5.9e-14	1	1
ENSCVAP00000020067	Surp	PF01805.20	6.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015290	-	2687	-	ENSCVAP00000000305	630 (aa)	-	-
ENSCVAT00000015288	-	2825	XM_015398466	ENSCVAP00000020067	676 (aa)	XP_015253952	-

Gene Model

Click here to download ENSCVAG00000001205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001205	-	92	78.000	ENSG00000061936	SFSWAP	87	46.000	Homo_sapiens
ENSCVAG00000001205	-	78	95.652	ENSAPOG00000005784	sfswap	50	95.652	Acanthochromis_polyacanthus
ENSCVAG00000001205	-	96	47.581	ENSAMEG00000013818	SFSWAP	51	63.514	Ailuropoda_melanoleuca
ENSCVAG00000001205	-	70	70.112	ENSAOCG00000016469	sfswap	60	71.300	Amphiprion_ocellaris
ENSCVAG00000001205	-	70	70.112	ENSAPEG00000004965	sfswap	59	71.300	Amphiprion_percula
ENSCVAG00000001205	-	88	70.045	ENSATEG00000021053	sfswap	58	69.438	Anabas_testudineus
ENSCVAG00000001205	-	72	46.110	ENSAPLG00000013808	SFSWAP	52	59.459	Anas_platyrhynchos
ENSCVAG00000001205	-	97	46.271	ENSANAG00000001518	SFSWAP	55	53.030	Aotus_nancymaae
ENSCVAG00000001205	-	70	72.360	ENSACLG00000020159	sfswap	71	64.507	Astatotilapia_calliptera
ENSCVAG00000001205	-	58	60.000	ENSAMXG00000008657	sfswap	51	63.158	Astyanax_mexicanus
ENSCVAG00000001205	-	80	53.182	ENSBTAG00000000439	SFSWAP	50	69.355	Bos_taurus
ENSCVAG00000001205	-	97	46.648	ENSCJAG00000003613	SFSWAP	60	78.000	Callithrix_jacchus
ENSCVAG00000001205	-	97	43.989	ENSCAFG00000006625	SFSWAP	51	63.514	Canis_familiaris
ENSCVAG00000001205	-	80	52.727	ENSCHIG00000008838	SFSWAP	50	69.355	Capra_hircus
ENSCVAG00000001205	-	72	47.249	ENSCAPG00000004394	SFSWAP	51	78.000	Cavia_aperea
ENSCVAG00000001205	-	70	53.097	ENSCPOG00000005280	SFSWAP	55	53.167	Cavia_porcellus
ENSCVAG00000001205	-	70	53.982	ENSCCAG00000037255	SFSWAP	55	53.030	Cebus_capucinus
ENSCVAG00000001205	-	66	78.000	ENSCATG00000031094	SFSWAP	50	78.000	Cercocebus_atys
ENSCVAG00000001205	-	67	80.000	ENSCHOG00000003578	SFSWAP	54	57.143	Choloepus_hoffmanni
ENSCVAG00000001205	-	97	46.325	ENSCPBG00000024757	SFSWAP	51	45.541	Chrysemys_picta_bellii
ENSCVAG00000001205	-	65	78.000	ENSCANG00000036501	SFSWAP	55	53.030	Colobus_angolensis_palliatus
ENSCVAG00000001205	-	72	51.515	ENSCGRG00001011284	Sfswap	52	59.740	Cricetulus_griseus_chok1gshd
ENSCVAG00000001205	-	72	48.276	ENSCGRG00000017417	Sfswap	52	59.740	Cricetulus_griseus_crigri
ENSCVAG00000001205	-	67	65.011	ENSCSEG00000003773	sfswap	74	54.636	Cynoglossus_semilaevis
ENSCVAG00000001205	-	71	48.120	ENSDNOG00000018742	SFSWAP	68	64.865	Dasypus_novemcinctus
ENSCVAG00000001205	-	73	82.927	ENSDORG00000010352	Sfswap	52	84.091	Dipodomys_ordii
ENSCVAG00000001205	-	78	34.722	ENSEBUG00000016748	SFSWAP	57	32.833	Eptatretus_burgeri
ENSCVAG00000001205	-	97	45.175	ENSEASG00005016502	SFSWAP	61	63.514	Equus_asinus_asinus
ENSCVAG00000001205	-	94	44.269	ENSECAG00000007657	SFSWAP	58	63.514	Equus_caballus
ENSCVAG00000001205	-	88	46.868	ENSEEUG00000001713	SFSWAP	57	75.926	Erinaceus_europaeus
ENSCVAG00000001205	-	80	57.987	ENSELUG00000010942	sfswap	59	58.150	Esox_lucius
ENSCVAG00000001205	-	97	46.770	ENSFCAG00000010778	SFSWAP	51	63.514	Felis_catus
ENSCVAG00000001205	-	97	47.117	ENSFDAG00000017235	SFSWAP	53	52.392	Fukomys_damarensis
ENSCVAG00000001205	-	70	45.541	ENSGALG00000002487	SFSWAP	52	59.459	Gallus_gallus
ENSCVAG00000001205	-	72	87.500	ENSGACG00000017647	sfswap	61	74.107	Gasterosteus_aculeatus
ENSCVAG00000001205	-	97	45.839	ENSGAGG00000002611	SFSWAP	50	58.333	Gopherus_agassizii
ENSCVAG00000001205	-	72	48.405	ENSGGOG00000014877	SFSWAP	55	52.593	Gorilla_gorilla
ENSCVAG00000001205	-	75	69.456	ENSHBUG00000005629	sfswap	58	72.197	Haplochromis_burtoni
ENSCVAG00000001205	-	72	47.901	ENSHGLG00000019216	SFSWAP	52	59.740	Heterocephalus_glaber_female
ENSCVAG00000001205	-	72	47.901	ENSHGLG00100019350	SFSWAP	52	59.740	Heterocephalus_glaber_male
ENSCVAG00000001205	-	70	62.363	ENSHCOG00000009475	sfswap	60	61.135	Hippocampus_comes
ENSCVAG00000001205	-	72	47.610	ENSSTOG00000000773	SFSWAP	52	61.039	Ictidomys_tridecemlineatus
ENSCVAG00000001205	-	97	45.734	ENSJJAG00000006609	Sfswap	53	62.821	Jaculus_jaculus
ENSCVAG00000001205	-	72	51.008	ENSLAFG00000014462	SFSWAP	53	53.829	Loxodonta_africana
ENSCVAG00000001205	-	92	78.000	ENSMFAG00000037352	SFSWAP	55	53.788	Macaca_fascicularis
ENSCVAG00000001205	-	92	78.000	ENSMNEG00000041002	SFSWAP	55	53.788	Macaca_nemestrina
ENSCVAG00000001205	-	64	78.000	ENSMLEG00000035728	SFSWAP	56	53.788	Mandrillus_leucophaeus
ENSCVAG00000001205	-	70	72.360	ENSMZEG00005017834	SFSWAP	61	67.462	Maylandia_zebra
ENSCVAG00000001205	-	53	57.647	ENSMICG00000004465	SFSWAP	50	80.000	Microcebus_murinus
ENSCVAG00000001205	-	72	48.008	ENSMOCG00000014390	Sfswap	52	59.740	Microtus_ochrogaster
ENSCVAG00000001205	-	73	69.114	ENSMALG00000012603	sfswap	51	68.444	Monopterus_albus
ENSCVAG00000001205	-	72	48.577	MGP_CAROLIEiJ_G0027780	Sfswap	52	59.740	Mus_caroli
ENSCVAG00000001205	-	72	48.467	ENSMUSG00000029439	Sfswap	52	59.740	Mus_musculus
ENSCVAG00000001205	-	72	47.810	MGP_PahariEiJ_G0024360	Sfswap	52	60.000	Mus_pahari
ENSCVAG00000001205	-	72	48.276	MGP_SPRETEiJ_G0028779	Sfswap	52	59.740	Mus_spretus
ENSCVAG00000001205	-	96	46.252	ENSMPUG00000002218	SFSWAP	53	63.514	Mustela_putorius_furo
ENSCVAG00000001205	-	97	45.833	ENSNGAG00000018167	Sfswap	51	84.091	Nannospalax_galili
ENSCVAG00000001205	-	70	72.646	ENSNBRG00000020857	sfswap	75	64.464	Neolamprologus_brichardi
ENSCVAG00000001205	-	97	93.478	ENSONIG00000003757	sfswap	54	93.478	Oreochromis_niloticus
ENSCVAG00000001205	-	67	43.487	ENSOANG00000013861	SFSWAP	58	58.108	Ornithorhynchus_anatinus
ENSCVAG00000001205	-	57	56.777	ENSOCUG00000002165	SFSWAP	52	80.000	Oryctolagus_cuniculus
ENSCVAG00000001205	-	80	51.786	ENSOARG00000014314	SFSWAP	55	53.125	Ovis_aries
ENSCVAG00000001205	-	66	78.000	ENSPPAG00000036706	SFSWAP	50	78.000	Pan_paniscus
ENSCVAG00000001205	-	97	44.664	ENSPPRG00000017318	SFSWAP	54	55.039	Panthera_pardus
ENSCVAG00000001205	-	66	78.000	ENSPTRG00000005640	SFSWAP	50	78.000	Pan_troglodytes
ENSCVAG00000001205	-	66	78.000	ENSPANG00000019737	SFSWAP	50	78.000	Papio_anubis
ENSCVAG00000001205	-	69	50.909	ENSPSIG00000017807	SFSWAP	75	52.308	Pelodiscus_sinensis
ENSCVAG00000001205	-	72	47.429	ENSPEMG00000001237	Sfswap	52	59.740	Peromyscus_maniculatus_bairdii
ENSCVAG00000001205	-	97	80.670	ENSPMEG00000008716	sfswap	50	84.152	Poecilia_mexicana
ENSCVAG00000001205	-	97	80.273	ENSPREG00000006692	sfswap	50	83.259	Poecilia_reticulata
ENSCVAG00000001205	-	72	48.092	ENSPCOG00000023786	SFSWAP	50	80.000	Propithecus_coquereli
ENSCVAG00000001205	-	70	72.360	ENSPNYG00000012660	sfswap	72	63.830	Pundamilia_nyererei
ENSCVAG00000001205	-	72	50.758	ENSRNOG00000000931	Sfswap	98	44.444	Rattus_norvegicus
ENSCVAG00000001205	-	66	78.000	ENSRROG00000032001	SFSWAP	55	53.788	Rhinopithecus_roxellana
ENSCVAG00000001205	-	72	47.593	ENSSBOG00000026217	SFSWAP	55	52.273	Saimiri_boliviensis_boliviensis
ENSCVAG00000001205	-	70	69.231	ENSSMAG00000018718	sfswap	71	60.901	Scophthalmus_maximus
ENSCVAG00000001205	-	83	69.643	ENSSDUG00000021680	sfswap	62	66.939	Seriola_dumerili
ENSCVAG00000001205	-	87	69.643	ENSSLDG00000010835	sfswap	58	77.049	Seriola_lalandi_dorsalis
ENSCVAG00000001205	-	67	67.188	ENSSARG00000000424	SFSWAP	55	69.355	Sorex_araneus
ENSCVAG00000001205	-	85	46.072	ENSSPUG00000010272	SFSWAP	63	60.256	Sphenodon_punctatus
ENSCVAG00000001205	-	69	69.457	ENSSPAG00000014310	sfswap	53	95.745	Stegastes_partitus
ENSCVAG00000001205	-	97	45.134	ENSSSCG00000009744	SFSWAP	57	57.831	Sus_scrofa
ENSCVAG00000001205	-	96	44.754	ENSUAMG00000016807	SFSWAP	52	63.514	Ursus_americanus
ENSCVAG00000001205	-	96	43.988	ENSVVUG00000010753	SFSWAP	51	63.514	Vulpes_vulpes
ENSCVAG00000001205	-	79	50.575	ENSXETG00000009350	sfswap	53	50.943	Xenopus_tropicalis
ENSCVAG00000001205	-	97	80.670	ENSXMAG00000009020	sfswap	50	84.821	Xiphophorus_maculatus