EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001265 (Gene tree)
Gene ID: 107100116
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4078 bases
Position: chrKL652529.1:351575-355652
Accession: 107100116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020103	PseudoU_synth_1	PF01416.20	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015202	-	1748	XM_015398487	ENSCVAP00000020103	414 (aa)	XP_015253973	UPI0007427219

Gene Model

Click here to download ENSCVAG00000001265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001265	pus1	89	68.392	ENSG00000177192	PUS1	90	70.809	Homo_sapiens
ENSCVAG00000001265	pus1	100	81.948	ENSAPOG00000007254	pus1	100	81.948	Acanthochromis_polyacanthus
ENSCVAG00000001265	pus1	90	66.578	ENSAMEG00000013715	PUS1	91	66.578	Ailuropoda_melanoleuca
ENSCVAG00000001265	pus1	94	84.596	ENSACIG00000009169	pus1	95	84.596	Amphilophus_citrinellus
ENSCVAG00000001265	pus1	100	82.423	ENSAOCG00000022207	pus1	100	82.423	Amphiprion_ocellaris
ENSCVAG00000001265	pus1	100	82.185	ENSAPEG00000006039	pus1	99	83.376	Amphiprion_percula
ENSCVAG00000001265	pus1	93	83.120	ENSATEG00000020688	pus1	100	83.120	Anabas_testudineus
ENSCVAG00000001265	pus1	82	71.471	ENSACAG00000007367	PUS1	91	71.471	Anolis_carolinensis
ENSCVAG00000001265	pus1	75	71.154	ENSANAG00000036192	PUS1	95	71.154	Aotus_nancymaae
ENSCVAG00000001265	pus1	100	82.660	ENSACLG00000020868	pus1	100	84.143	Astatotilapia_calliptera
ENSCVAG00000001265	pus1	93	72.959	ENSAMXG00000008710	pus1	90	72.959	Astyanax_mexicanus
ENSCVAG00000001265	pus1	81	30.077	ENSBTAG00000014339	PUS3	72	30.077	Bos_taurus
ENSCVAG00000001265	pus1	88	67.123	ENSBTAG00000012990	PUS1	91	67.123	Bos_taurus
ENSCVAG00000001265	pus1	80	40.057	WBGene00004248	pus-1	83	40.057	Caenorhabditis_elegans
ENSCVAG00000001265	pus1	61	70.472	ENSCJAG00000003720	PUS1	72	68.165	Callithrix_jacchus
ENSCVAG00000001265	pus1	90	65.952	ENSCAFG00000006429	PUS1	88	69.034	Canis_familiaris
ENSCVAG00000001265	pus1	85	69.034	ENSCAFG00020010737	PUS1	81	69.034	Canis_lupus_dingo
ENSCVAG00000001265	pus1	88	67.397	ENSCHIG00000000487	PUS1	91	67.397	Capra_hircus
ENSCVAG00000001265	pus1	83	70.175	ENSTSYG00000032605	PUS1	99	67.302	Carlito_syrichta
ENSCVAG00000001265	pus1	72	72.910	ENSCAPG00000006421	PUS1	93	72.848	Cavia_aperea
ENSCVAG00000001265	pus1	83	69.883	ENSCPOG00000001027	PUS1	87	65.946	Cavia_porcellus
ENSCVAG00000001265	pus1	83	70.349	ENSCCAG00000015879	PUS1	90	69.018	Cebus_capucinus
ENSCVAG00000001265	pus1	89	67.480	ENSCATG00000032870	PUS1	89	69.632	Cercocebus_atys
ENSCVAG00000001265	pus1	93	63.753	ENSCLAG00000011689	PUS1	98	60.671	Chinchilla_lanigera
ENSCVAG00000001265	pus1	89	67.751	ENSCSAG00000001879	PUS1	85	67.751	Chlorocebus_sabaeus
ENSCVAG00000001265	pus1	76	72.611	ENSCPBG00000024715	PUS1	93	70.031	Chrysemys_picta_bellii
ENSCVAG00000001265	pus1	84	46.000	ENSCING00000009426	-	92	46.000	Ciona_intestinalis
ENSCVAG00000001265	pus1	77	45.141	ENSCSAVG00000003751	-	66	45.141	Ciona_savignyi
ENSCVAG00000001265	pus1	84	63.506	ENSCANG00000035561	PUS1	83	66.883	Colobus_angolensis_palliatus
ENSCVAG00000001265	pus1	70	31.193	ENSCGRG00001019842	Pus3	62	31.193	Cricetulus_griseus_chok1gshd
ENSCVAG00000001265	pus1	87	68.975	ENSCGRG00001019592	Pus1	84	68.975	Cricetulus_griseus_chok1gshd
ENSCVAG00000001265	pus1	87	68.975	ENSCGRG00000004048	Pus1	91	68.975	Cricetulus_griseus_crigri
ENSCVAG00000001265	pus1	70	31.193	ENSCGRG00000010155	Pus3	62	31.193	Cricetulus_griseus_crigri
ENSCVAG00000001265	pus1	100	76.247	ENSCSEG00000003629	pus1	100	76.247	Cynoglossus_semilaevis
ENSCVAG00000001265	pus1	71	30.514	ENSDARG00000028976	pus3	66	30.514	Danio_rerio
ENSCVAG00000001265	pus1	99	66.024	ENSDARG00000045562	pus1	97	75.735	Danio_rerio
ENSCVAG00000001265	pus1	86	67.978	ENSDNOG00000045576	PUS1	94	71.336	Dasypus_novemcinctus
ENSCVAG00000001265	pus1	78	69.136	ENSDORG00000011455	Pus1	99	69.136	Dipodomys_ordii
ENSCVAG00000001265	pus1	82	46.552	FBgn0038811	PUS1	83	46.552	Drosophila_melanogaster
ENSCVAG00000001265	pus1	83	69.971	ENSETEG00000019160	PUS1	86	68.555	Echinops_telfairi
ENSCVAG00000001265	pus1	82	45.179	ENSEBUG00000000368	-	68	45.082	Eptatretus_burgeri
ENSCVAG00000001265	pus1	84	69.164	ENSEASG00005016535	PUS1	80	69.164	Equus_asinus_asinus
ENSCVAG00000001265	pus1	84	69.164	ENSECAG00000006965	PUS1	87	69.164	Equus_caballus
ENSCVAG00000001265	pus1	93	73.590	ENSELUG00000010424	pus1	99	73.590	Esox_lucius
ENSCVAG00000001265	pus1	84	69.364	ENSFCAG00000010780	PUS1	81	69.364	Felis_catus
ENSCVAG00000001265	pus1	98	62.530	ENSFALG00000008273	PUS1	95	62.530	Ficedula_albicollis
ENSCVAG00000001265	pus1	85	69.296	ENSFDAG00000012518	PUS1	86	69.296	Fukomys_damarensis
ENSCVAG00000001265	pus1	100	88.756	ENSFHEG00000010504	pus1	100	88.756	Fundulus_heteroclitus
ENSCVAG00000001265	pus1	94	73.657	ENSGMOG00000008143	pus1	99	73.657	Gadus_morhua
ENSCVAG00000001265	pus1	89	68.182	ENSGALG00000002354	PUS1	91	68.182	Gallus_gallus
ENSCVAG00000001265	pus1	100	87.770	ENSGAFG00000006578	pus1	100	87.770	Gambusia_affinis
ENSCVAG00000001265	pus1	100	80.998	ENSGACG00000017566	pus1	99	82.353	Gasterosteus_aculeatus
ENSCVAG00000001265	pus1	79	68.997	ENSGAGG00000016730	-	94	68.997	Gopherus_agassizii
ENSCVAG00000001265	pus1	61	31.010	ENSGAGG00000000160	PUS3	52	31.010	Gopherus_agassizii
ENSCVAG00000001265	pus1	89	68.392	ENSGGOG00000009178	PUS1	87	70.552	Gorilla_gorilla
ENSCVAG00000001265	pus1	100	83.135	ENSHBUG00000001316	pus1	100	84.655	Haplochromis_burtoni
ENSCVAG00000001265	pus1	72	31.118	ENSHGLG00000015753	-	81	31.118	Heterocephalus_glaber_female
ENSCVAG00000001265	pus1	87	66.111	ENSHGLG00000016086	PUS1	91	66.111	Heterocephalus_glaber_female
ENSCVAG00000001265	pus1	87	65.833	ENSHGLG00100019362	PUS1	91	65.833	Heterocephalus_glaber_male
ENSCVAG00000001265	pus1	70	30.793	ENSHGLG00100008656	-	98	30.793	Heterocephalus_glaber_male
ENSCVAG00000001265	pus1	100	75.540	ENSHCOG00000014288	pus1	96	75.540	Hippocampus_comes
ENSCVAG00000001265	pus1	90	76.203	ENSIPUG00000010387	pus1	91	77.686	Ictalurus_punctatus
ENSCVAG00000001265	pus1	72	30.086	ENSSTOG00000003721	PUS3	66	30.086	Ictidomys_tridecemlineatus
ENSCVAG00000001265	pus1	85	68.169	ENSSTOG00000011245	PUS1	86	66.213	Ictidomys_tridecemlineatus
ENSCVAG00000001265	pus1	93	64.416	ENSJJAG00000000088	Pus1	91	64.416	Jaculus_jaculus
ENSCVAG00000001265	pus1	100	77.197	ENSKMAG00000012702	pus1	100	77.197	Kryptolebias_marmoratus
ENSCVAG00000001265	pus1	94	79.747	ENSLBEG00000002845	pus1	97	79.747	Labrus_bergylta
ENSCVAG00000001265	pus1	86	67.582	ENSLACG00000018598	PUS1	94	65.963	Latimeria_chalumnae
ENSCVAG00000001265	pus1	78	58.075	ENSLACG00000016044	-	97	58.075	Latimeria_chalumnae
ENSCVAG00000001265	pus1	87	71.429	ENSLOCG00000006127	pus1	92	71.429	Lepisosteus_oculatus
ENSCVAG00000001265	pus1	69	30.030	ENSLAFG00000000535	PUS3	64	30.030	Loxodonta_africana
ENSCVAG00000001265	pus1	85	69.231	ENSLAFG00000028731	PUS1	94	69.231	Loxodonta_africana
ENSCVAG00000001265	pus1	89	67.751	ENSMFAG00000041194	PUS1	89	69.939	Macaca_fascicularis
ENSCVAG00000001265	pus1	84	70.402	ENSMMUG00000031463	PUS1	87	73.355	Macaca_mulatta
ENSCVAG00000001265	pus1	89	67.751	ENSMNEG00000002814	PUS1	89	69.939	Macaca_nemestrina
ENSCVAG00000001265	pus1	79	69.939	ENSMLEG00000043560	PUS1	99	70.062	Mandrillus_leucophaeus
ENSCVAG00000001265	pus1	100	80.285	ENSMAMG00000007371	pus1	100	80.285	Mastacembelus_armatus
ENSCVAG00000001265	pus1	100	82.660	ENSMZEG00005017746	pus1	100	82.660	Maylandia_zebra
ENSCVAG00000001265	pus1	78	72.136	ENSMGAG00000001958	PUS1	98	72.136	Meleagris_gallopavo
ENSCVAG00000001265	pus1	87	69.444	ENSMAUG00000001482	Pus1	84	69.444	Mesocricetus_auratus
ENSCVAG00000001265	pus1	70	30.581	ENSMAUG00000015873	Pus3	62	30.581	Mesocricetus_auratus
ENSCVAG00000001265	pus1	90	66.846	ENSMICG00000030980	PUS1	91	66.846	Microcebus_murinus
ENSCVAG00000001265	pus1	92	65.445	ENSMOCG00000022311	Pus1	90	65.445	Microtus_ochrogaster
ENSCVAG00000001265	pus1	93	79.328	ENSMMOG00000021022	pus1	99	79.328	Mola_mola
ENSCVAG00000001265	pus1	80	69.184	ENSMODG00000015551	PUS1	78	66.949	Monodelphis_domestica
ENSCVAG00000001265	pus1	99	79.286	ENSMALG00000013202	pus1	99	79.286	Monopterus_albus
ENSCVAG00000001265	pus1	89	68.120	MGP_CAROLIEiJ_G0027551	Pus1	93	68.120	Mus_caroli
ENSCVAG00000001265	pus1	89	68.120	ENSMUSG00000029507	Pus1	93	68.120	Mus_musculus
ENSCVAG00000001265	pus1	88	68.681	MGP_PahariEiJ_G0024133	Pus1	92	68.681	Mus_pahari
ENSCVAG00000001265	pus1	89	68.120	MGP_SPRETEiJ_G0028549	Pus1	93	68.120	Mus_spretus
ENSCVAG00000001265	pus1	85	68.571	ENSMPUG00000002314	PUS1	88	68.571	Mustela_putorius_furo
ENSCVAG00000001265	pus1	72	31.412	ENSMLUG00000030636	PUS3	66	31.412	Myotis_lucifugus
ENSCVAG00000001265	pus1	87	65.746	ENSMLUG00000015790	PUS1	99	65.746	Myotis_lucifugus
ENSCVAG00000001265	pus1	86	68.611	ENSNGAG00000012976	Pus1	85	68.611	Nannospalax_galili
ENSCVAG00000001265	pus1	93	84.143	ENSNBRG00000020502	pus1	100	84.840	Neolamprologus_brichardi
ENSCVAG00000001265	pus1	89	66.667	ENSNLEG00000008505	PUS1	99	70.476	Nomascus_leucogenys
ENSCVAG00000001265	pus1	83	62.500	ENSMEUG00000002825	PUS1	92	62.500	Notamacropus_eugenii
ENSCVAG00000001265	pus1	84	61.960	ENSOPRG00000002701	-	91	61.960	Ochotona_princeps
ENSCVAG00000001265	pus1	84	69.364	ENSODEG00000008248	PUS1	91	69.364	Octodon_degus
ENSCVAG00000001265	pus1	93	83.123	ENSONIG00000003803	pus1	100	83.123	Oreochromis_niloticus
ENSCVAG00000001265	pus1	79	30.939	ENSOANG00000000406	PUS3	69	30.939	Ornithorhynchus_anatinus
ENSCVAG00000001265	pus1	84	67.630	ENSOANG00000010619	PUS1	83	65.651	Ornithorhynchus_anatinus
ENSCVAG00000001265	pus1	72	30.659	ENSOCUG00000004468	PUS3	63	30.659	Oryctolagus_cuniculus
ENSCVAG00000001265	pus1	83	70.468	ENSOCUG00000007310	PUS1	75	69.942	Oryctolagus_cuniculus
ENSCVAG00000001265	pus1	100	81.429	ENSORLG00000010787	pus1	100	81.429	Oryzias_latipes
ENSCVAG00000001265	pus1	100	81.190	ENSORLG00020011483	pus1	100	81.190	Oryzias_latipes_hni
ENSCVAG00000001265	pus1	100	81.190	ENSORLG00015023012	pus1	99	83.505	Oryzias_latipes_hsok
ENSCVAG00000001265	pus1	98	83.374	ENSOMEG00000022655	pus1	96	83.374	Oryzias_melastigma
ENSCVAG00000001265	pus1	84	68.786	ENSOGAG00000008720	PUS1	96	66.577	Otolemur_garnettii
ENSCVAG00000001265	pus1	88	67.123	ENSOARG00000013316	PUS1	84	67.123	Ovis_aries
ENSCVAG00000001265	pus1	89	68.665	ENSPPAG00000040971	PUS1	87	70.859	Pan_paniscus
ENSCVAG00000001265	pus1	84	69.364	ENSPPRG00000015456	PUS1	87	69.364	Panthera_pardus
ENSCVAG00000001265	pus1	83	69.388	ENSPTIG00000004201	PUS1	89	69.565	Panthera_tigris_altaica
ENSCVAG00000001265	pus1	89	68.937	ENSPTRG00000005643	PUS1	87	71.166	Pan_troglodytes
ENSCVAG00000001265	pus1	89	68.022	ENSPANG00000000376	PUS1	89	70.245	Papio_anubis
ENSCVAG00000001265	pus1	95	63.171	ENSPKIG00000019369	pus1	96	62.175	Paramormyrops_kingsleyae
ENSCVAG00000001265	pus1	95	64.322	ENSPSIG00000016432	PUS1	98	62.619	Pelodiscus_sinensis
ENSCVAG00000001265	pus1	64	31.650	ENSPSIG00000013961	PUS3	54	31.650	Pelodiscus_sinensis
ENSCVAG00000001265	pus1	90	77.333	ENSPMGG00000004522	pus1	95	78.747	Periophthalmus_magnuspinnatus
ENSCVAG00000001265	pus1	89	68.120	ENSPEMG00000013448	Pus1	86	68.120	Peromyscus_maniculatus_bairdii
ENSCVAG00000001265	pus1	70	30.793	ENSPEMG00000009602	Pus3	62	30.793	Peromyscus_maniculatus_bairdii
ENSCVAG00000001265	pus1	79	61.231	ENSPMAG00000004636	pus1	98	61.231	Petromyzon_marinus
ENSCVAG00000001265	pus1	73	60.927	ENSPCIG00000022609	-	75	58.491	Phascolarctos_cinereus
ENSCVAG00000001265	pus1	100	87.290	ENSPFOG00000019669	pus1	100	87.290	Poecilia_formosa
ENSCVAG00000001265	pus1	100	87.050	ENSPLAG00000002692	-	100	87.050	Poecilia_latipinna
ENSCVAG00000001265	pus1	100	87.050	ENSPLAG00000007185	pus1	100	87.050	Poecilia_latipinna
ENSCVAG00000001265	pus1	100	87.050	ENSPMEG00000011115	PUS1	100	87.050	Poecilia_mexicana
ENSCVAG00000001265	pus1	98	86.978	ENSPMEG00000006038	pus1	99	86.978	Poecilia_mexicana
ENSCVAG00000001265	pus1	95	87.121	ENSPREG00000007231	pus1	99	89.415	Poecilia_reticulata
ENSCVAG00000001265	pus1	89	68.564	ENSPPYG00000005132	PUS1	86	68.564	Pongo_abelii
ENSCVAG00000001265	pus1	69	30.120	ENSPCAG00000000441	PUS3	64	30.120	Procavia_capensis
ENSCVAG00000001265	pus1	64	66.165	ENSPCAG00000009110	-	65	66.165	Procavia_capensis
ENSCVAG00000001265	pus1	77	66.458	ENSPCOG00000015595	PUS1	90	60.218	Propithecus_coquereli
ENSCVAG00000001265	pus1	72	31.124	ENSPCOG00000019330	PUS3	66	31.124	Propithecus_coquereli
ENSCVAG00000001265	pus1	72	30.372	ENSPVAG00000002606	PUS3	66	30.372	Pteropus_vampyrus
ENSCVAG00000001265	pus1	100	82.660	ENSPNYG00000013571	pus1	100	82.660	Pundamilia_nyererei
ENSCVAG00000001265	pus1	90	76.190	ENSPNAG00000003938	pus1	88	76.190	Pygocentrus_nattereri
ENSCVAG00000001265	pus1	89	67.575	ENSRNOG00000037500	Pus1	86	67.575	Rattus_norvegicus
ENSCVAG00000001265	pus1	89	68.293	ENSRBIG00000043177	PUS1	90	70.552	Rhinopithecus_bieti
ENSCVAG00000001265	pus1	89	68.293	ENSRROG00000039744	PUS1	88	70.199	Rhinopithecus_roxellana
ENSCVAG00000001265	pus1	80	44.138	YPL212C	-	69	37.500	Saccharomyces_cerevisiae
ENSCVAG00000001265	pus1	64	47.059	YGL063W	-	70	47.059	Saccharomyces_cerevisiae
ENSCVAG00000001265	pus1	89	67.204	ENSSBOG00000023593	PUS1	93	68.712	Saimiri_boliviensis_boliviensis
ENSCVAG00000001265	pus1	88	67.033	ENSSHAG00000013193	PUS1	86	67.033	Sarcophilus_harrisii
ENSCVAG00000001265	pus1	85	74.011	ENSSFOG00015003463	pus1	83	72.404	Scleropages_formosus
ENSCVAG00000001265	pus1	100	77.910	ENSSMAG00000019075	pus1	100	78.622	Scophthalmus_maximus
ENSCVAG00000001265	pus1	100	81.948	ENSSDUG00000007102	pus1	100	81.948	Seriola_dumerili
ENSCVAG00000001265	pus1	100	81.473	ENSSLDG00000022850	pus1	100	81.473	Seriola_lalandi_dorsalis
ENSCVAG00000001265	pus1	73	62.583	ENSSARG00000008367	PUS1	97	62.583	Sorex_araneus
ENSCVAG00000001265	pus1	93	66.667	ENSSPUG00000010009	PUS1	95	66.667	Sphenodon_punctatus
ENSCVAG00000001265	pus1	93	82.609	ENSSPAG00000006272	pus1	99	82.609	Stegastes_partitus
ENSCVAG00000001265	pus1	81	30.311	ENSSSCG00000015222	PUS3	72	30.311	Sus_scrofa
ENSCVAG00000001265	pus1	93	65.885	ENSSSCG00000009741	PUS1	91	67.575	Sus_scrofa
ENSCVAG00000001265	pus1	80	73.030	ENSTGUG00000008068	PUS1	99	73.030	Taeniopygia_guttata
ENSCVAG00000001265	pus1	94	75.641	ENSTRUG00000002198	pus1	98	75.641	Takifugu_rubripes
ENSCVAG00000001265	pus1	90	76.267	ENSTNIG00000003942	pus1	95	76.800	Tetraodon_nigroviridis
ENSCVAG00000001265	pus1	95	61.614	ENSTTRG00000000632	PUS1	96	61.614	Tursiops_truncatus
ENSCVAG00000001265	pus1	84	69.628	ENSUAMG00000017197	PUS1	88	69.628	Ursus_americanus
ENSCVAG00000001265	pus1	86	69.101	ENSUMAG00000002831	PUS1	95	72.327	Ursus_maritimus
ENSCVAG00000001265	pus1	72	31.124	ENSVPAG00000001495	PUS3	66	31.124	Vicugna_pacos
ENSCVAG00000001265	pus1	85	69.714	ENSVVUG00000004199	PUS1	79	69.914	Vulpes_vulpes
ENSCVAG00000001265	pus1	66	32.000	ENSXETG00000024532	pus3	52	32.000	Xenopus_tropicalis
ENSCVAG00000001265	pus1	91	64.362	ENSXETG00000002030	pus1	94	64.362	Xenopus_tropicalis
ENSCVAG00000001265	pus1	77	49.845	ENSXETG00000033640	-	99	49.845	Xenopus_tropicalis
ENSCVAG00000001265	pus1	95	88.636	ENSXCOG00000004722	pus1	98	89.446	Xiphophorus_couchianus
ENSCVAG00000001265	pus1	100	88.489	ENSXMAG00000000988	pus1	100	88.489	Xiphophorus_maculatus