EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000001276 (Gene tree)
Gene ID: 107100154
Gene Symbol: snrpd3l
Alias: wu:fa18f04|zgc:56125
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4869 bases
Position: chrKL652529.1:173649-178517
Accession: 107100154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000371	LSM	PF01423.22	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015175	-	717	XM_015398546	ENSCVAP00000000371	127 (aa)	XP_015254032	UPI00074277F3

Gene Model

Click here to download ENSCVAG00000001276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000001276	snrpd3l	65	31.325	ENSCVAG00000000534	snrpd1	84	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001276	snrpd3l	100	97.638	ENSG00000100028	SNRPD3	100	97.638	Homo_sapiens
ENSCVAG00000001276	snrpd3l	100	98.425	ENSAPOG00000007512	snrpd3l	100	98.425	Acanthochromis_polyacanthus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSAMEG00000013935	SNRPD3	100	97.638	Ailuropoda_melanoleuca
ENSCVAG00000001276	snrpd3l	100	98.425	ENSACIG00000008871	snrpd3l	100	98.425	Amphilophus_citrinellus
ENSCVAG00000001276	snrpd3l	83	99.057	ENSAOCG00000016759	-	98	99.057	Amphiprion_ocellaris
ENSCVAG00000001276	snrpd3l	100	98.425	ENSAOCG00000016743	snrpd3l	100	98.425	Amphiprion_ocellaris
ENSCVAG00000001276	snrpd3l	100	98.425	ENSAOCG00000008497	SNRPD3	100	98.425	Amphiprion_ocellaris
ENSCVAG00000001276	snrpd3l	100	98.425	ENSAOCG00000022442	-	100	98.425	Amphiprion_ocellaris
ENSCVAG00000001276	snrpd3l	83	99.057	ENSAPEG00000006260	-	98	99.057	Amphiprion_percula
ENSCVAG00000001276	snrpd3l	100	98.425	ENSAPEG00000006273	snrpd3l	100	98.425	Amphiprion_percula
ENSCVAG00000001276	snrpd3l	100	98.425	ENSATEG00000020556	snrpd3l	91	98.425	Anabas_testudineus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSAPLG00000008670	SNRPD3	100	97.638	Anas_platyrhynchos
ENSCVAG00000001276	snrpd3l	100	97.638	ENSANAG00000026106	SNRPD3	100	97.638	Aotus_nancymaae
ENSCVAG00000001276	snrpd3l	100	98.425	ENSACLG00000021295	snrpd3l	100	98.425	Astatotilapia_calliptera
ENSCVAG00000001276	snrpd3l	100	96.094	ENSAMXG00000038984	snrpd3l	100	96.094	Astyanax_mexicanus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSBTAG00000021262	SNRPD3	100	97.638	Bos_taurus
ENSCVAG00000001276	snrpd3l	90	63.478	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCJAG00000009630	SNRPD3	100	97.638	Callithrix_jacchus
ENSCVAG00000001276	snrpd3l	100	96.850	ENSCAFG00000017258	-	100	96.850	Canis_familiaris
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCAFG00000013864	-	100	97.638	Canis_familiaris
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCAFG00020007165	-	100	97.638	Canis_lupus_dingo
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCHIG00000000057	SNRPD3	100	97.638	Capra_hircus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSTSYG00000007649	SNRPD3	100	97.638	Carlito_syrichta
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCAPG00000016432	-	100	97.638	Cavia_aperea
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCPOG00000033102	-	100	97.638	Cavia_porcellus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCCAG00000035006	SNRPD3	100	97.638	Cebus_capucinus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCATG00000038878	SNRPD3	100	97.638	Cercocebus_atys
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCLAG00000011403	SNRPD3	100	97.638	Chinchilla_lanigera
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCSAG00000010694	SNRPD3	100	97.638	Chlorocebus_sabaeus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCPBG00000002065	SNRPD3	100	97.638	Chrysemys_picta_bellii
ENSCVAG00000001276	snrpd3l	84	79.439	ENSCSAVG00000004708	-	80	79.439	Ciona_savignyi
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCANG00000032106	SNRPD3	100	97.638	Colobus_angolensis_palliatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCGRG00001021990	Snrpd3	100	97.638	Cricetulus_griseus_chok1gshd
ENSCVAG00000001276	snrpd3l	100	97.638	ENSCGRG00000004280	Snrpd3	100	97.638	Cricetulus_griseus_crigri
ENSCVAG00000001276	snrpd3l	100	96.094	ENSDARG00000076283	snrpd3l	100	96.094	Danio_rerio
ENSCVAG00000001276	snrpd3l	100	94.488	ENSDARG00000013800	snrpd3	100	94.488	Danio_rerio
ENSCVAG00000001276	snrpd3l	100	87.692	ENSDNOG00000018004	-	100	85.385	Dasypus_novemcinctus
ENSCVAG00000001276	snrpd3l	97	75.610	ENSDNOG00000042638	-	100	73.171	Dasypus_novemcinctus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSDNOG00000047424	-	100	97.638	Dasypus_novemcinctus
ENSCVAG00000001276	snrpd3l	87	89.189	ENSDORG00000002800	-	100	85.586	Dipodomys_ordii
ENSCVAG00000001276	snrpd3l	100	73.228	ENSDORG00000027169	-	100	69.291	Dipodomys_ordii
ENSCVAG00000001276	snrpd3l	100	82.677	ENSDORG00000027706	-	100	80.315	Dipodomys_ordii
ENSCVAG00000001276	snrpd3l	83	83.962	FBgn0023167	SmD3	71	83.178	Drosophila_melanogaster
ENSCVAG00000001276	snrpd3l	100	97.638	ENSEASG00005000273	SNRPD3	100	97.638	Equus_asinus_asinus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSECAG00000023316	SNRPD3	100	97.638	Equus_caballus
ENSCVAG00000001276	snrpd3l	100	96.850	ENSEEUG00000015518	SNRPD3	100	96.850	Erinaceus_europaeus
ENSCVAG00000001276	snrpd3l	100	96.063	ENSELUG00000001854	snrpd3	100	96.063	Esox_lucius
ENSCVAG00000001276	snrpd3l	100	99.213	ENSELUG00000010092	snrpd3l	100	99.213	Esox_lucius
ENSCVAG00000001276	snrpd3l	100	97.638	ENSFCAG00000001512	SNRPD3	100	97.638	Felis_catus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSFALG00000007303	SNRPD3	100	97.638	Ficedula_albicollis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSFDAG00000010772	SNRPD3	100	97.638	Fukomys_damarensis
ENSCVAG00000001276	snrpd3l	100	99.213	ENSFHEG00000010754	snrpd3l	100	99.213	Fundulus_heteroclitus
ENSCVAG00000001276	snrpd3l	100	97.656	ENSGMOG00000008469	snrpd3l	100	97.656	Gadus_morhua
ENSCVAG00000001276	snrpd3l	100	97.638	ENSGALG00000006596	SNRPD3	100	97.638	Gallus_gallus
ENSCVAG00000001276	snrpd3l	83	99.057	ENSGAFG00000006661	snrpd3l	82	99.057	Gambusia_affinis
ENSCVAG00000001276	snrpd3l	100	97.656	ENSGACG00000017533	snrpd3l	100	97.656	Gasterosteus_aculeatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSGAGG00000023325	SNRPD3	100	97.638	Gopherus_agassizii
ENSCVAG00000001276	snrpd3l	100	97.638	ENSGGOG00000015640	SNRPD3	100	97.638	Gorilla_gorilla
ENSCVAG00000001276	snrpd3l	100	98.425	ENSHBUG00000001332	snrpd3l	100	98.425	Haplochromis_burtoni
ENSCVAG00000001276	snrpd3l	99	91.270	ENSHGLG00000009844	-	99	90.476	Heterocephalus_glaber_female
ENSCVAG00000001276	snrpd3l	100	97.638	ENSHGLG00000016496	SNRPD3	100	97.638	Heterocephalus_glaber_female
ENSCVAG00000001276	snrpd3l	99	91.270	ENSHGLG00100011326	-	99	90.476	Heterocephalus_glaber_male
ENSCVAG00000001276	snrpd3l	100	97.638	ENSHGLG00100019304	SNRPD3	100	97.638	Heterocephalus_glaber_male
ENSCVAG00000001276	snrpd3l	100	97.638	ENSHCOG00000014396	snrpd3l	100	97.638	Hippocampus_comes
ENSCVAG00000001276	snrpd3l	100	96.094	ENSIPUG00000003083	snrpd3	100	96.094	Ictalurus_punctatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSSTOG00000025674	SNRPD3	100	97.638	Ictidomys_tridecemlineatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSJJAG00000013303	Snrpd3	100	97.638	Jaculus_jaculus
ENSCVAG00000001276	snrpd3l	100	99.213	ENSKMAG00000012493	snrpd3l	100	99.213	Kryptolebias_marmoratus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSLBEG00000003202	snrpd3l	100	98.425	Labrus_bergylta
ENSCVAG00000001276	snrpd3l	100	96.850	ENSLACG00000015192	SNRPD3	100	96.850	Latimeria_chalumnae
ENSCVAG00000001276	snrpd3l	100	98.425	ENSLOCG00000006978	snrpd3	100	98.425	Lepisosteus_oculatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSLAFG00000028180	SNRPD3	100	97.638	Loxodonta_africana
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMFAG00000033628	SNRPD3	100	97.638	Macaca_fascicularis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMMUG00000000264	SNRPD3	100	97.638	Macaca_mulatta
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMNEG00000020857	SNRPD3	100	97.638	Macaca_nemestrina
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMLEG00000037548	SNRPD3	100	97.638	Mandrillus_leucophaeus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSMZEG00005017664	snrpd3l	100	98.425	Maylandia_zebra
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMAUG00000021393	Snrpd3	100	97.638	Mesocricetus_auratus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMICG00000034782	SNRPD3	100	97.638	Microcebus_murinus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMOCG00000009361	Snrpd3	100	97.638	Microtus_ochrogaster
ENSCVAG00000001276	snrpd3l	83	99.057	ENSMMOG00000020985	snrpd3l	67	99.057	Mola_mola
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMODG00000004024	SNRPD3	100	97.638	Monodelphis_domestica
ENSCVAG00000001276	snrpd3l	100	98.425	ENSMALG00000013334	snrpd3l	100	98.425	Monopterus_albus
ENSCVAG00000001276	snrpd3l	100	97.638	MGP_CAROLIEiJ_G0015441	Snrpd3	100	97.638	Mus_caroli
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMUSG00000020180	Snrpd3	100	97.638	Mus_musculus
ENSCVAG00000001276	snrpd3l	100	97.638	MGP_PahariEiJ_G0030857	Snrpd3	100	97.638	Mus_pahari
ENSCVAG00000001276	snrpd3l	100	97.638	MGP_SPRETEiJ_G0016254	Snrpd3	100	97.638	Mus_spretus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMPUG00000002889	SNRPD3	100	97.638	Mustela_putorius_furo
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMLUG00000009838	SNRPD3	100	97.638	Myotis_lucifugus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSNGAG00000010328	Snrpd3	100	97.638	Nannospalax_galili
ENSCVAG00000001276	snrpd3l	100	98.425	ENSNBRG00000020307	snrpd3l	100	98.425	Neolamprologus_brichardi
ENSCVAG00000001276	snrpd3l	100	97.638	ENSNLEG00000035757	SNRPD3	100	97.638	Nomascus_leucogenys
ENSCVAG00000001276	snrpd3l	100	97.638	ENSMEUG00000003772	SNRPD3	100	97.638	Notamacropus_eugenii
ENSCVAG00000001276	snrpd3l	100	97.638	ENSOPRG00000005763	SNRPD3	100	97.638	Ochotona_princeps
ENSCVAG00000001276	snrpd3l	100	97.638	ENSODEG00000008064	-	100	97.638	Octodon_degus
ENSCVAG00000001276	snrpd3l	100	96.850	ENSODEG00000019354	-	100	96.850	Octodon_degus
ENSCVAG00000001276	snrpd3l	100	94.488	ENSODEG00000020162	-	100	90.551	Octodon_degus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSONIG00000003828	snrpd3l	100	98.425	Oreochromis_niloticus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSOANG00000002463	SNRPD3	100	97.638	Ornithorhynchus_anatinus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSOCUG00000004845	SNRPD3	100	97.638	Oryctolagus_cuniculus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSORLG00000010586	snrpd3l	100	98.425	Oryzias_latipes
ENSCVAG00000001276	snrpd3l	100	98.425	ENSORLG00020011769	snrpd3l	100	98.425	Oryzias_latipes_hni
ENSCVAG00000001276	snrpd3l	100	98.425	ENSORLG00015022940	snrpd3l	100	98.425	Oryzias_latipes_hsok
ENSCVAG00000001276	snrpd3l	100	99.213	ENSOMEG00000022734	snrpd3l	100	99.213	Oryzias_melastigma
ENSCVAG00000001276	snrpd3l	100	97.638	ENSOGAG00000012708	SNRPD3	100	97.638	Otolemur_garnettii
ENSCVAG00000001276	snrpd3l	100	97.638	ENSOARG00000013984	SNRPD3	100	97.638	Ovis_aries
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPPAG00000039191	SNRPD3	100	97.638	Pan_paniscus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPPRG00000001470	SNRPD3	100	97.638	Panthera_pardus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPTIG00000016610	SNRPD3	100	97.638	Panthera_tigris_altaica
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPTRG00000014176	SNRPD3	100	97.638	Pan_troglodytes
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPANG00000009279	SNRPD3	100	97.638	Papio_anubis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPKIG00000006412	snrpd3l	100	97.638	Paramormyrops_kingsleyae
ENSCVAG00000001276	snrpd3l	100	96.063	ENSPSIG00000010022	-	100	96.063	Pelodiscus_sinensis
ENSCVAG00000001276	snrpd3l	98	96.774	ENSPMGG00000004486	snrpd3l	100	96.774	Periophthalmus_magnuspinnatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPCIG00000010910	SNRPD3	84	97.638	Phascolarctos_cinereus
ENSCVAG00000001276	snrpd3l	100	99.213	ENSPFOG00000019673	snrpd3l	100	99.213	Poecilia_formosa
ENSCVAG00000001276	snrpd3l	100	99.213	ENSPLAG00000023249	snrpd3l	100	99.213	Poecilia_latipinna
ENSCVAG00000001276	snrpd3l	100	99.213	ENSPMEG00000008482	snrpd3l	100	99.213	Poecilia_mexicana
ENSCVAG00000001276	snrpd3l	97	88.618	ENSPREG00000007532	snrpd3l	98	88.618	Poecilia_reticulata
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPPYG00000011648	SNRPD3	100	97.638	Pongo_abelii
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPCAG00000002065	SNRPD3	100	97.638	Procavia_capensis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSPCOG00000011842	SNRPD3	100	97.638	Propithecus_coquereli
ENSCVAG00000001276	snrpd3l	100	96.850	ENSPVAG00000011405	SNRPD3	100	96.850	Pteropus_vampyrus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSPNYG00000013344	snrpd3l	100	98.425	Pundamilia_nyererei
ENSCVAG00000001276	snrpd3l	100	96.850	ENSPNAG00000010547	snrpd3	100	96.850	Pygocentrus_nattereri
ENSCVAG00000001276	snrpd3l	100	89.062	ENSPNAG00000008683	snrpd3l	100	94.531	Pygocentrus_nattereri
ENSCVAG00000001276	snrpd3l	100	97.638	ENSRNOG00000050410	Snrpd3	100	97.638	Rattus_norvegicus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSRBIG00000029017	SNRPD3	100	97.638	Rhinopithecus_bieti
ENSCVAG00000001276	snrpd3l	100	97.638	ENSRROG00000031152	SNRPD3	100	97.638	Rhinopithecus_roxellana
ENSCVAG00000001276	snrpd3l	75	48.421	YLR147C	SMD3	92	48.421	Saccharomyces_cerevisiae
ENSCVAG00000001276	snrpd3l	100	96.063	ENSSFOG00015014180	snrpd3l	100	96.063	Scleropages_formosus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSSFOG00015007002	snrpd3l	100	97.638	Scleropages_formosus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSSMAG00000019307	snrpd3l	100	98.425	Scophthalmus_maximus
ENSCVAG00000001276	snrpd3l	100	98.425	ENSSDUG00000006870	snrpd3l	100	98.425	Seriola_dumerili
ENSCVAG00000001276	snrpd3l	100	98.425	ENSSLDG00000022664	snrpd3l	100	98.425	Seriola_lalandi_dorsalis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSSARG00000002357	SNRPD3	100	97.638	Sorex_araneus
ENSCVAG00000001276	snrpd3l	100	96.850	ENSSPUG00000014285	SNRPD3	100	96.850	Sphenodon_punctatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSSSCG00000010058	SNRPD3	100	97.638	Sus_scrofa
ENSCVAG00000001276	snrpd3l	100	97.638	ENSTGUG00000010079	SNRPD3	100	97.638	Taeniopygia_guttata
ENSCVAG00000001276	snrpd3l	83	99.057	ENSTRUG00000023976	snrpd3l	90	99.057	Takifugu_rubripes
ENSCVAG00000001276	snrpd3l	100	99.213	ENSTNIG00000005323	snrpd3l	100	99.213	Tetraodon_nigroviridis
ENSCVAG00000001276	snrpd3l	100	97.638	ENSTBEG00000014334	SNRPD3	100	97.638	Tupaia_belangeri
ENSCVAG00000001276	snrpd3l	100	97.638	ENSTTRG00000006022	SNRPD3	100	97.638	Tursiops_truncatus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSUAMG00000010767	SNRPD3	100	97.638	Ursus_americanus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSUMAG00000001670	SNRPD3	100	97.638	Ursus_maritimus
ENSCVAG00000001276	snrpd3l	100	97.638	ENSVPAG00000000241	SNRPD3	100	97.638	Vicugna_pacos
ENSCVAG00000001276	snrpd3l	83	99.057	ENSVVUG00000019340	SNRPD3	53	99.057	Vulpes_vulpes
ENSCVAG00000001276	snrpd3l	100	81.395	ENSXETG00000024918	snrpd3	100	77.519	Xenopus_tropicalis
ENSCVAG00000001276	snrpd3l	100	99.213	ENSXCOG00000004795	snrpd3l	100	99.213	Xiphophorus_couchianus
ENSCVAG00000001276	snrpd3l	100	99.213	ENSXMAG00000001133	snrpd3l	100	99.213	Xiphophorus_maculatus