EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001285 (Gene tree)
Gene ID: 107102726
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4811 bases
Position: chrKL653805.1:124062-128872
Accession: 107102726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000384	MRP-S27	PF10037.9	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015160	-	1855	XM_015402132	ENSCVAP00000000384	390 (aa)	XP_015257618	-

Gene Model

Click here to download ENSCVAG00000001285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001285	ptcd2	89	45.402	ENSG00000049883	PTCD2	100	41.379	Homo_sapiens
ENSCVAG00000001285	ptcd2	97	73.421	ENSAPOG00000020682	ptcd2	99	73.421	Acanthochromis_polyacanthus
ENSCVAG00000001285	ptcd2	89	43.678	ENSAMEG00000007194	PTCD2	90	43.678	Ailuropoda_melanoleuca
ENSCVAG00000001285	ptcd2	88	68.391	ENSACIG00000002053	ptcd2	100	68.391	Amphilophus_citrinellus
ENSCVAG00000001285	ptcd2	100	74.359	ENSAOCG00000006616	ptcd2	100	74.359	Amphiprion_ocellaris
ENSCVAG00000001285	ptcd2	100	74.359	ENSAPEG00000022926	ptcd2	100	74.359	Amphiprion_percula
ENSCVAG00000001285	ptcd2	89	48.415	ENSACAG00000009747	PTCD2	89	48.415	Anolis_carolinensis
ENSCVAG00000001285	ptcd2	89	44.253	ENSANAG00000029353	PTCD2	90	44.253	Aotus_nancymaae
ENSCVAG00000001285	ptcd2	100	76.410	ENSACLG00000027742	ptcd2	100	76.410	Astatotilapia_calliptera
ENSCVAG00000001285	ptcd2	89	51.585	ENSAMXG00000029404	ptcd2	92	51.585	Astyanax_mexicanus
ENSCVAG00000001285	ptcd2	89	45.402	ENSBTAG00000014675	PTCD2	91	45.402	Bos_taurus
ENSCVAG00000001285	ptcd2	89	43.391	ENSCJAG00000016364	PTCD2	90	43.391	Callithrix_jacchus
ENSCVAG00000001285	ptcd2	94	44.149	ENSCAFG00000007982	PTCD2	82	46.264	Canis_familiaris
ENSCVAG00000001285	ptcd2	88	46.243	ENSCAFG00020019147	PTCD2	97	46.243	Canis_lupus_dingo
ENSCVAG00000001285	ptcd2	94	43.158	ENSCHIG00000017118	PTCD2	99	43.158	Capra_hircus
ENSCVAG00000001285	ptcd2	92	43.583	ENSCPOG00000040168	PTCD2	98	43.583	Cavia_porcellus
ENSCVAG00000001285	ptcd2	89	44.540	ENSCCAG00000029389	-	90	44.540	Cebus_capucinus
ENSCVAG00000001285	ptcd2	70	45.055	ENSCCAG00000021996	-	84	45.055	Cebus_capucinus
ENSCVAG00000001285	ptcd2	95	44.920	ENSCATG00000019069	PTCD2	98	44.920	Cercocebus_atys
ENSCVAG00000001285	ptcd2	89	44.540	ENSCLAG00000000072	PTCD2	91	44.540	Chinchilla_lanigera
ENSCVAG00000001285	ptcd2	89	45.977	ENSCSAG00000015623	PTCD2	98	44.385	Chlorocebus_sabaeus
ENSCVAG00000001285	ptcd2	71	48.824	ENSCHOG00000010634	PTCD2	79	48.824	Choloepus_hoffmanni
ENSCVAG00000001285	ptcd2	93	46.322	ENSCPBG00000000216	PTCD2	94	46.322	Chrysemys_picta_bellii
ENSCVAG00000001285	ptcd2	95	45.187	ENSCANG00000035636	PTCD2	96	45.187	Colobus_angolensis_palliatus
ENSCVAG00000001285	ptcd2	91	44.687	ENSCGRG00001015289	Ptcd2	80	44.687	Cricetulus_griseus_chok1gshd
ENSCVAG00000001285	ptcd2	91	44.687	ENSCGRG00000006193	Ptcd2	80	44.687	Cricetulus_griseus_crigri
ENSCVAG00000001285	ptcd2	93	51.240	ENSDARG00000035391	ptcd2	95	51.240	Danio_rerio
ENSCVAG00000001285	ptcd2	89	45.115	ENSDNOG00000008719	PTCD2	91	45.115	Dasypus_novemcinctus
ENSCVAG00000001285	ptcd2	89	45.977	ENSDORG00000004921	Ptcd2	90	45.977	Dipodomys_ordii
ENSCVAG00000001285	ptcd2	90	41.761	ENSETEG00000016542	PTCD2	90	41.761	Echinops_telfairi
ENSCVAG00000001285	ptcd2	94	43.501	ENSEASG00005018038	PTCD2	99	43.501	Equus_asinus_asinus
ENSCVAG00000001285	ptcd2	89	45.115	ENSECAG00000007022	PTCD2	90	45.115	Equus_caballus
ENSCVAG00000001285	ptcd2	93	44.536	ENSEEUG00000014031	PTCD2	94	44.536	Erinaceus_europaeus
ENSCVAG00000001285	ptcd2	94	62.568	ENSELUG00000003584	ptcd2	96	62.568	Esox_lucius
ENSCVAG00000001285	ptcd2	81	46.349	ENSFCAG00000045432	PTCD2	74	46.349	Felis_catus
ENSCVAG00000001285	ptcd2	84	44.648	ENSFALG00000010299	PTCD2	99	44.648	Ficedula_albicollis
ENSCVAG00000001285	ptcd2	91	43.380	ENSFDAG00000018461	PTCD2	93	43.380	Fukomys_damarensis
ENSCVAG00000001285	ptcd2	98	60.881	ENSGMOG00000003637	ptcd2	100	60.881	Gadus_morhua
ENSCVAG00000001285	ptcd2	89	43.516	ENSGALG00000038260	PTCD2	99	41.689	Gallus_gallus
ENSCVAG00000001285	ptcd2	89	51.585	ENSGAGG00000021952	PTCD2	89	51.585	Gopherus_agassizii
ENSCVAG00000001285	ptcd2	89	45.402	ENSGGOG00000010695	PTCD2	90	45.402	Gorilla_gorilla
ENSCVAG00000001285	ptcd2	100	75.510	ENSHBUG00000009191	ptcd2	100	75.510	Haplochromis_burtoni
ENSCVAG00000001285	ptcd2	89	44.540	ENSHGLG00000001234	PTCD2	91	44.540	Heterocephalus_glaber_female
ENSCVAG00000001285	ptcd2	89	44.540	ENSHGLG00100015419	PTCD2	91	44.540	Heterocephalus_glaber_male
ENSCVAG00000001285	ptcd2	97	64.752	ENSHCOG00000001703	ptcd2	99	64.752	Hippocampus_comes
ENSCVAG00000001285	ptcd2	92	54.696	ENSIPUG00000006080	ptcd2	99	55.065	Ictalurus_punctatus
ENSCVAG00000001285	ptcd2	89	45.272	ENSSTOG00000006596	PTCD2	91	45.272	Ictidomys_tridecemlineatus
ENSCVAG00000001285	ptcd2	89	46.132	ENSJJAG00000024388	Ptcd2	91	46.132	Jaculus_jaculus
ENSCVAG00000001285	ptcd2	98	66.057	ENSKMAG00000009329	ptcd2	100	66.057	Kryptolebias_marmoratus
ENSCVAG00000001285	ptcd2	100	65.641	ENSLBEG00000024871	ptcd2	99	65.641	Labrus_bergylta
ENSCVAG00000001285	ptcd2	96	55.585	ENSLOCG00000011122	ptcd2	98	55.585	Lepisosteus_oculatus
ENSCVAG00000001285	ptcd2	71	49.455	ENSLAFG00000004115	PTCD2	98	46.732	Loxodonta_africana
ENSCVAG00000001285	ptcd2	95	45.455	ENSMFAG00000031516	PTCD2	96	45.455	Macaca_fascicularis
ENSCVAG00000001285	ptcd2	89	46.552	ENSMNEG00000007537	PTCD2	91	46.552	Macaca_nemestrina
ENSCVAG00000001285	ptcd2	95	44.920	ENSMLEG00000031093	PTCD2	96	44.920	Mandrillus_leucophaeus
ENSCVAG00000001285	ptcd2	96	73.797	ENSMAMG00000018529	ptcd2	98	73.797	Mastacembelus_armatus
ENSCVAG00000001285	ptcd2	100	76.410	ENSMZEG00005003625	ptcd2	100	76.410	Maylandia_zebra
ENSCVAG00000001285	ptcd2	89	44.253	ENSMGAG00000005033	PTCD2	100	44.253	Meleagris_gallopavo
ENSCVAG00000001285	ptcd2	91	47.917	ENSMAUG00000020253	Ptcd2	96	35.422	Mesocricetus_auratus
ENSCVAG00000001285	ptcd2	89	45.402	ENSMICG00000004535	PTCD2	90	45.402	Microcebus_murinus
ENSCVAG00000001285	ptcd2	89	44.828	ENSMOCG00000019985	Ptcd2	91	44.828	Microtus_ochrogaster
ENSCVAG00000001285	ptcd2	98	46.859	ENSMODG00000001695	PTCD2	97	46.859	Monodelphis_domestica
ENSCVAG00000001285	ptcd2	96	72.727	ENSMALG00000022372	ptcd2	98	72.727	Monopterus_albus
ENSCVAG00000001285	ptcd2	89	43.678	MGP_CAROLIEiJ_G0018829	Ptcd2	91	43.678	Mus_caroli
ENSCVAG00000001285	ptcd2	89	43.966	ENSMUSG00000021650	Ptcd2	91	43.966	Mus_musculus
ENSCVAG00000001285	ptcd2	89	46.264	MGP_PahariEiJ_G0015904	Ptcd2	91	46.264	Mus_pahari
ENSCVAG00000001285	ptcd2	89	44.828	MGP_SPRETEiJ_G0019711	Ptcd2	91	44.828	Mus_spretus
ENSCVAG00000001285	ptcd2	89	46.132	ENSMPUG00000014401	PTCD2	91	46.132	Mustela_putorius_furo
ENSCVAG00000001285	ptcd2	89	44.253	ENSMLUG00000007374	PTCD2	90	44.253	Myotis_lucifugus
ENSCVAG00000001285	ptcd2	89	45.690	ENSNGAG00000005027	Ptcd2	91	45.690	Nannospalax_galili
ENSCVAG00000001285	ptcd2	84	74.164	ENSNBRG00000000092	-	100	74.164	Neolamprologus_brichardi
ENSCVAG00000001285	ptcd2	97	77.368	ENSNBRG00000008174	ptcd2	99	77.368	Neolamprologus_brichardi
ENSCVAG00000001285	ptcd2	89	45.115	ENSNLEG00000004516	PTCD2	90	45.115	Nomascus_leucogenys
ENSCVAG00000001285	ptcd2	58	59.509	ENSMEUG00000014012	-	63	56.818	Notamacropus_eugenii
ENSCVAG00000001285	ptcd2	89	45.402	ENSOPRG00000007290	PTCD2	90	45.402	Ochotona_princeps
ENSCVAG00000001285	ptcd2	91	44.507	ENSODEG00000016417	PTCD2	93	44.507	Octodon_degus
ENSCVAG00000001285	ptcd2	86	75.595	ENSONIG00000011269	ptcd2	98	75.595	Oreochromis_niloticus
ENSCVAG00000001285	ptcd2	91	43.944	ENSOCUG00000007970	PTCD2	93	43.944	Oryctolagus_cuniculus
ENSCVAG00000001285	ptcd2	100	73.077	ENSORLG00000003851	ptcd2	100	73.077	Oryzias_latipes
ENSCVAG00000001285	ptcd2	98	72.585	ENSORLG00020009823	ptcd2	100	72.585	Oryzias_latipes_hni
ENSCVAG00000001285	ptcd2	88	71.884	ENSORLG00015016777	ptcd2	99	71.884	Oryzias_latipes_hsok
ENSCVAG00000001285	ptcd2	100	71.795	ENSOMEG00000012396	ptcd2	95	71.795	Oryzias_melastigma
ENSCVAG00000001285	ptcd2	99	44.103	ENSOGAG00000008390	PTCD2	95	44.103	Otolemur_garnettii
ENSCVAG00000001285	ptcd2	89	45.402	ENSOARG00000005087	PTCD2	89	45.402	Ovis_aries
ENSCVAG00000001285	ptcd2	89	45.402	ENSPPAG00000028480	PTCD2	90	45.402	Pan_paniscus
ENSCVAG00000001285	ptcd2	89	45.115	ENSPTRG00000016968	PTCD2	90	45.115	Pan_troglodytes
ENSCVAG00000001285	ptcd2	88	46.377	ENSPANG00000006611	PTCD2	89	46.377	Papio_anubis
ENSCVAG00000001285	ptcd2	92	56.111	ENSPKIG00000019896	ptcd2	94	56.111	Paramormyrops_kingsleyae
ENSCVAG00000001285	ptcd2	78	51.645	ENSPSIG00000014559	PTCD2	94	51.645	Pelodiscus_sinensis
ENSCVAG00000001285	ptcd2	89	46.286	ENSPEMG00000000884	Ptcd2	91	46.286	Peromyscus_maniculatus_bairdii
ENSCVAG00000001285	ptcd2	91	49.157	ENSPCIG00000029047	PTCD2	92	49.157	Phascolarctos_cinereus
ENSCVAG00000001285	ptcd2	98	81.201	ENSPLAG00000010456	ptcd2	100	81.201	Poecilia_latipinna
ENSCVAG00000001285	ptcd2	99	81.701	ENSPREG00000021797	ptcd2	99	81.701	Poecilia_reticulata
ENSCVAG00000001285	ptcd2	89	40.230	ENSPPYG00000015543	PTCD2	88	40.230	Pongo_abelii
ENSCVAG00000001285	ptcd2	70	43.066	ENSPCAG00000006806	PTCD2	87	43.066	Procavia_capensis
ENSCVAG00000001285	ptcd2	89	44.828	ENSPVAG00000010935	PTCD2	90	44.828	Pteropus_vampyrus
ENSCVAG00000001285	ptcd2	100	76.410	ENSPNYG00000003122	ptcd2	100	76.410	Pundamilia_nyererei
ENSCVAG00000001285	ptcd2	98	61.757	ENSPNAG00000021490	ptcd2	100	61.757	Pygocentrus_nattereri
ENSCVAG00000001285	ptcd2	89	47.414	ENSRNOG00000028403	Ptcd2	91	47.414	Rattus_norvegicus
ENSCVAG00000001285	ptcd2	89	41.954	ENSRBIG00000032929	PTCD2	89	41.954	Rhinopithecus_bieti
ENSCVAG00000001285	ptcd2	89	46.264	ENSRROG00000000080	PTCD2	91	46.264	Rhinopithecus_roxellana
ENSCVAG00000001285	ptcd2	89	44.160	ENSSBOG00000018911	PTCD2	91	44.160	Saimiri_boliviensis_boliviensis
ENSCVAG00000001285	ptcd2	97	44.935	ENSSHAG00000003833	PTCD2	99	44.935	Sarcophilus_harrisii
ENSCVAG00000001285	ptcd2	98	54.663	ENSSFOG00015015415	ptcd2	100	54.663	Scleropages_formosus
ENSCVAG00000001285	ptcd2	95	64.420	ENSSMAG00000010350	ptcd2	94	64.420	Scophthalmus_maximus
ENSCVAG00000001285	ptcd2	100	72.564	ENSSDUG00000008142	ptcd2	97	72.564	Seriola_dumerili
ENSCVAG00000001285	ptcd2	96	73.262	ENSSLDG00000015284	ptcd2	98	73.262	Seriola_lalandi_dorsalis
ENSCVAG00000001285	ptcd2	70	40.146	ENSSARG00000004983	PTCD2	87	40.146	Sorex_araneus
ENSCVAG00000001285	ptcd2	89	46.552	ENSSPUG00000000176	PTCD2	87	46.552	Sphenodon_punctatus
ENSCVAG00000001285	ptcd2	100	67.092	ENSSPAG00000008591	ptcd2	100	67.092	Stegastes_partitus
ENSCVAG00000001285	ptcd2	93	44.262	ENSSSCG00000016975	PTCD2	86	44.262	Sus_scrofa
ENSCVAG00000001285	ptcd2	88	46.667	ENSTGUG00000005705	PTCD2	99	46.667	Taeniopygia_guttata
ENSCVAG00000001285	ptcd2	90	43.590	ENSTBEG00000016559	PTCD2	90	43.590	Tupaia_belangeri
ENSCVAG00000001285	ptcd2	89	45.533	ENSTTRG00000011851	PTCD2	89	45.533	Tursiops_truncatus
ENSCVAG00000001285	ptcd2	89	44.986	ENSUAMG00000007583	PTCD2	81	44.986	Ursus_americanus
ENSCVAG00000001285	ptcd2	95	43.200	ENSUMAG00000007666	PTCD2	98	43.200	Ursus_maritimus
ENSCVAG00000001285	ptcd2	89	43.966	ENSVPAG00000009597	PTCD2	89	43.966	Vicugna_pacos
ENSCVAG00000001285	ptcd2	89	45.977	ENSVVUG00000007299	-	97	40.720	Vulpes_vulpes
ENSCVAG00000001285	ptcd2	98	44.388	ENSXETG00000031652	PTCD2	100	44.388	Xenopus_tropicalis
ENSCVAG00000001285	ptcd2	99	80.463	ENSXMAG00000005940	ptcd2	92	80.463	Xiphophorus_maculatus