EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001340 (Gene tree)
Gene ID: 107082075
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6775 bases
Position: chrKL652547.1:1609051-1615825
Accession: 107082075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000436	EF_TS	PF00889.19	4.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015080	-	1888	XM_015370539	ENSCVAP00000000436	305 (aa)	XP_015226025	UPI0007425DCA

Gene Model

Click here to download ENSCVAG00000001340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001340	tsfm	96	49.667	ENSG00000123297	TSFM	100	57.447	Homo_sapiens
ENSCVAG00000001340	tsfm	100	80.130	ENSAPOG00000014844	tsfm	99	80.130	Acanthochromis_polyacanthus
ENSCVAG00000001340	tsfm	87	53.506	ENSAMEG00000005452	TSFM	84	53.818	Ailuropoda_melanoleuca
ENSCVAG00000001340	tsfm	99	80.858	ENSACIG00000001066	tsfm	98	80.858	Amphilophus_citrinellus
ENSCVAG00000001340	tsfm	100	79.479	ENSAOCG00000007132	tsfm	99	79.479	Amphiprion_ocellaris
ENSCVAG00000001340	tsfm	100	79.805	ENSAPEG00000015755	tsfm	99	79.805	Amphiprion_percula
ENSCVAG00000001340	tsfm	100	78.502	ENSATEG00000001497	tsfm	99	78.502	Anabas_testudineus
ENSCVAG00000001340	tsfm	92	53.793	ENSACAG00000013044	TSFM	89	53.793	Anolis_carolinensis
ENSCVAG00000001340	tsfm	91	52.817	ENSANAG00000038019	TSFM	84	56.643	Aotus_nancymaae
ENSCVAG00000001340	tsfm	99	79.085	ENSACLG00000000139	tsfm	99	79.085	Astatotilapia_calliptera
ENSCVAG00000001340	tsfm	99	68.317	ENSAMXG00000001713	tsfm	98	68.317	Astyanax_mexicanus
ENSCVAG00000001340	tsfm	87	55.147	ENSBTAG00000016912	TSFM	74	54.577	Bos_taurus
ENSCVAG00000001340	tsfm	91	35.161	WBGene00010094	tsfm-1	97	35.161	Caenorhabditis_elegans
ENSCVAG00000001340	tsfm	94	51.351	ENSCJAG00000006600	TSFM	91	51.667	Callithrix_jacchus
ENSCVAG00000001340	tsfm	90	51.601	ENSCAFG00000000293	-	89	51.916	Canis_familiaris
ENSCVAG00000001340	tsfm	90	51.601	ENSCAFG00020022844	TSFM	70	51.916	Canis_lupus_dingo
ENSCVAG00000001340	tsfm	87	54.412	ENSCHIG00000013850	TSFM	97	51.111	Capra_hircus
ENSCVAG00000001340	tsfm	75	52.521	ENSTSYG00000028892	TSFM	90	52.917	Carlito_syrichta
ENSCVAG00000001340	tsfm	62	42.408	ENSCAPG00000007733	-	95	43.077	Cavia_aperea
ENSCVAG00000001340	tsfm	87	53.704	ENSCPOG00000037732	TSFM	84	54.015	Cavia_porcellus
ENSCVAG00000001340	tsfm	94	52.525	ENSCCAG00000033254	TSFM	91	52.824	Cebus_capucinus
ENSCVAG00000001340	tsfm	94	50.847	ENSCATG00000016867	TSFM	91	51.171	Cercocebus_atys
ENSCVAG00000001340	tsfm	87	50.741	ENSCLAG00000009226	TSFM	84	51.095	Chinchilla_lanigera
ENSCVAG00000001340	tsfm	94	51.689	ENSCSAG00000004601	TSFM	91	52.000	Chlorocebus_sabaeus
ENSCVAG00000001340	tsfm	60	60.156	ENSCHOG00000002360	TSFM	72	60.156	Choloepus_hoffmanni
ENSCVAG00000001340	tsfm	95	54.882	ENSCPBG00000018147	TSFM	89	54.882	Chrysemys_picta_bellii
ENSCVAG00000001340	tsfm	87	34.459	ENSCING00000001275	-	88	34.459	Ciona_intestinalis
ENSCVAG00000001340	tsfm	66	32.870	ENSCSAVG00000007722	-	100	32.870	Ciona_savignyi
ENSCVAG00000001340	tsfm	82	49.609	ENSCANG00000030298	TSFM	89	52.282	Colobus_angolensis_palliatus
ENSCVAG00000001340	tsfm	90	53.521	ENSCGRG00001023000	TSFM	89	53.448	Cricetulus_griseus_chok1gshd
ENSCVAG00000001340	tsfm	90	53.521	ENSCGRG00000006566	TSFM	89	53.448	Cricetulus_griseus_crigri
ENSCVAG00000001340	tsfm	100	67.213	ENSCSEG00000003376	tsfm	99	67.213	Cynoglossus_semilaevis
ENSCVAG00000001340	tsfm	98	64.901	ENSDARG00000060748	tsfm	99	64.901	Danio_rerio
ENSCVAG00000001340	tsfm	97	48.377	ENSDNOG00000049415	TSFM	96	48.718	Dasypus_novemcinctus
ENSCVAG00000001340	tsfm	77	54.132	ENSDORG00000007272	Tsfm	91	54.132	Dipodomys_ordii
ENSCVAG00000001340	tsfm	92	39.189	FBgn0032646	mEFTs	92	39.189	Drosophila_melanogaster
ENSCVAG00000001340	tsfm	90	51.237	ENSETEG00000002686	-	87	51.579	Echinops_telfairi
ENSCVAG00000001340	tsfm	90	52.313	ENSEASG00005007292	TSFM	69	52.632	Equus_asinus_asinus
ENSCVAG00000001340	tsfm	87	53.137	ENSECAG00000010520	TSFM	75	53.455	Equus_caballus
ENSCVAG00000001340	tsfm	58	49.198	ENSEEUG00000004147	-	100	49.198	Erinaceus_europaeus
ENSCVAG00000001340	tsfm	99	71.382	ENSELUG00000015481	tsfm	99	71.382	Esox_lucius
ENSCVAG00000001340	tsfm	92	52.431	ENSFCAG00000023794	TSFM	99	46.637	Felis_catus
ENSCVAG00000001340	tsfm	89	52.000	ENSFDAG00000016548	TSFM	85	52.000	Fukomys_damarensis
ENSCVAG00000001340	tsfm	100	87.296	ENSFHEG00000013458	tsfm	100	87.296	Fundulus_heteroclitus
ENSCVAG00000001340	tsfm	91	73.477	ENSGMOG00000000868	tsfm	97	73.477	Gadus_morhua
ENSCVAG00000001340	tsfm	100	84.691	ENSGAFG00000021764	tsfm	100	84.691	Gambusia_affinis
ENSCVAG00000001340	tsfm	95	76.632	ENSGACG00000000697	tsfm	94	76.632	Gasterosteus_aculeatus
ENSCVAG00000001340	tsfm	91	56.446	ENSGAGG00000020897	TSFM	85	56.446	Gopherus_agassizii
ENSCVAG00000001340	tsfm	94	50.338	ENSGGOG00000001415	TSFM	91	50.667	Gorilla_gorilla
ENSCVAG00000001340	tsfm	99	79.412	ENSHBUG00000021738	tsfm	99	79.412	Haplochromis_burtoni
ENSCVAG00000001340	tsfm	88	51.460	ENSHGLG00000008559	TSFM	84	51.460	Heterocephalus_glaber_female
ENSCVAG00000001340	tsfm	88	51.460	ENSHGLG00100005643	TSFM	84	51.460	Heterocephalus_glaber_male
ENSCVAG00000001340	tsfm	100	75.163	ENSHCOG00000021049	tsfm	99	75.163	Hippocampus_comes
ENSCVAG00000001340	tsfm	95	53.979	ENSIPUG00000019836	tsfm	85	53.979	Ictalurus_punctatus
ENSCVAG00000001340	tsfm	87	52.399	ENSSTOG00000001159	TSFM	84	51.825	Ictidomys_tridecemlineatus
ENSCVAG00000001340	tsfm	88	52.190	ENSJJAG00000012907	Tsfm	85	52.190	Jaculus_jaculus
ENSCVAG00000001340	tsfm	100	79.805	ENSKMAG00000018906	tsfm	99	79.805	Kryptolebias_marmoratus
ENSCVAG00000001340	tsfm	100	77.199	ENSLBEG00000019779	tsfm	99	77.199	Labrus_bergylta
ENSCVAG00000001340	tsfm	96	53.974	ENSLACG00000018125	TSFM	92	53.974	Latimeria_chalumnae
ENSCVAG00000001340	tsfm	98	47.039	ENSLOCG00000006608	tsfm	96	47.039	Lepisosteus_oculatus
ENSCVAG00000001340	tsfm	89	53.261	ENSLAFG00000015177	TSFM	85	53.261	Loxodonta_africana
ENSCVAG00000001340	tsfm	94	50.847	ENSMFAG00000036132	TSFM	91	51.171	Macaca_fascicularis
ENSCVAG00000001340	tsfm	94	50.847	ENSMMUG00000005893	TSFM	91	51.171	Macaca_mulatta
ENSCVAG00000001340	tsfm	94	50.847	ENSMNEG00000026351	TSFM	91	51.171	Macaca_nemestrina
ENSCVAG00000001340	tsfm	94	50.847	ENSMLEG00000029811	TSFM	91	51.171	Mandrillus_leucophaeus
ENSCVAG00000001340	tsfm	100	78.176	ENSMAMG00000002230	tsfm	98	79.661	Mastacembelus_armatus
ENSCVAG00000001340	tsfm	99	79.412	ENSMZEG00005008170	tsfm	99	79.412	Maylandia_zebra
ENSCVAG00000001340	tsfm	97	51.645	ENSMAUG00000011705	Tsfm	93	51.974	Mesocricetus_auratus
ENSCVAG00000001340	tsfm	86	51.311	ENSMICG00000003812	TSFM	84	51.460	Microcebus_murinus
ENSCVAG00000001340	tsfm	96	52.013	ENSMOCG00000006104	Tsfm	92	52.174	Microtus_ochrogaster
ENSCVAG00000001340	tsfm	100	79.479	ENSMMOG00000021854	tsfm	99	79.479	Mola_mola
ENSCVAG00000001340	tsfm	92	51.568	ENSMODG00000021351	TSFM	87	51.568	Monodelphis_domestica
ENSCVAG00000001340	tsfm	100	79.805	ENSMALG00000015046	tsfm	99	79.805	Monopterus_albus
ENSCVAG00000001340	tsfm	91	54.386	MGP_CAROLIEiJ_G0015873	Tsfm	88	54.386	Mus_caroli
ENSCVAG00000001340	tsfm	92	54.167	ENSMUSG00000040521	Tsfm	89	54.167	Mus_musculus
ENSCVAG00000001340	tsfm	97	52.303	MGP_PahariEiJ_G0031212	Tsfm	89	56.571	Mus_pahari
ENSCVAG00000001340	tsfm	92	54.167	MGP_SPRETEiJ_G0016699	Tsfm	89	54.167	Mus_spretus
ENSCVAG00000001340	tsfm	90	53.737	ENSMPUG00000002051	TSFM	88	54.035	Mustela_putorius_furo
ENSCVAG00000001340	tsfm	90	53.047	ENSMLUG00000005940	TSFM	98	50.000	Myotis_lucifugus
ENSCVAG00000001340	tsfm	87	54.779	ENSNGAG00000014356	Tsfm	87	53.103	Nannospalax_galili
ENSCVAG00000001340	tsfm	99	79.085	ENSNBRG00000016413	tsfm	99	79.085	Neolamprologus_brichardi
ENSCVAG00000001340	tsfm	94	50.676	ENSNLEG00000017178	TSFM	91	51.000	Nomascus_leucogenys
ENSCVAG00000001340	tsfm	66	64.935	ENSMEUG00000004047	TSFM	61	64.935	Notamacropus_eugenii
ENSCVAG00000001340	tsfm	88	47.440	ENSOPRG00000006670	TSFM	85	47.797	Ochotona_princeps
ENSCVAG00000001340	tsfm	88	54.579	ENSODEG00000001882	TSFM	85	54.545	Octodon_degus
ENSCVAG00000001340	tsfm	99	72.964	ENSONIG00000019100	tsfm	98	72.964	Oreochromis_niloticus
ENSCVAG00000001340	tsfm	88	46.309	ENSOCUG00000012512	TSFM	78	44.277	Oryctolagus_cuniculus
ENSCVAG00000001340	tsfm	97	74.257	ENSORLG00000030201	tsfm	97	74.257	Oryzias_latipes
ENSCVAG00000001340	tsfm	91	79.211	ENSORLG00020004740	tsfm	97	74.257	Oryzias_latipes_hni
ENSCVAG00000001340	tsfm	92	77.936	ENSORLG00015022703	tsfm	97	73.597	Oryzias_latipes_hsok
ENSCVAG00000001340	tsfm	93	79.505	ENSOMEG00000008934	tsfm	90	79.505	Oryzias_melastigma
ENSCVAG00000001340	tsfm	88	52.727	ENSOGAG00000012235	TSFM	84	52.727	Otolemur_garnettii
ENSCVAG00000001340	tsfm	87	54.779	ENSOARG00000005095	TSFM	84	54.225	Ovis_aries
ENSCVAG00000001340	tsfm	94	50.000	ENSPPAG00000043428	TSFM	91	50.333	Pan_paniscus
ENSCVAG00000001340	tsfm	92	52.431	ENSPPRG00000009667	TSFM	100	46.429	Panthera_pardus
ENSCVAG00000001340	tsfm	92	52.431	ENSPTIG00000015290	TSFM	99	46.637	Panthera_tigris_altaica
ENSCVAG00000001340	tsfm	94	50.000	ENSPTRG00000005152	TSFM	91	50.333	Pan_troglodytes
ENSCVAG00000001340	tsfm	94	50.847	ENSPANG00000007866	TSFM	91	51.171	Papio_anubis
ENSCVAG00000001340	tsfm	98	62.333	ENSPKIG00000008495	tsfm	94	62.333	Paramormyrops_kingsleyae
ENSCVAG00000001340	tsfm	64	51.232	ENSPSIG00000015776	TSFM	93	51.232	Pelodiscus_sinensis
ENSCVAG00000001340	tsfm	100	73.770	ENSPMGG00000007022	tsfm	99	73.770	Periophthalmus_magnuspinnatus
ENSCVAG00000001340	tsfm	87	53.137	ENSPEMG00000000414	Tsfm	93	50.820	Peromyscus_maniculatus_bairdii
ENSCVAG00000001340	tsfm	91	51.399	ENSPCIG00000023619	TSFM	90	51.399	Phascolarctos_cinereus
ENSCVAG00000001340	tsfm	100	83.388	ENSPFOG00000010782	tsfm	100	83.388	Poecilia_formosa
ENSCVAG00000001340	tsfm	100	82.410	ENSPLAG00000008105	tsfm	100	82.410	Poecilia_latipinna
ENSCVAG00000001340	tsfm	100	84.039	ENSPMEG00000002567	tsfm	100	84.039	Poecilia_mexicana
ENSCVAG00000001340	tsfm	100	82.085	ENSPREG00000016696	tsfm	100	82.085	Poecilia_reticulata
ENSCVAG00000001340	tsfm	94	50.676	ENSPPYG00000004708	TSFM	77	51.000	Pongo_abelii
ENSCVAG00000001340	tsfm	90	50.847	ENSPCAG00000003789	TSFM	88	50.842	Procavia_capensis
ENSCVAG00000001340	tsfm	90	51.601	ENSPCOG00000021606	TSFM	87	51.930	Propithecus_coquereli
ENSCVAG00000001340	tsfm	90	53.025	ENSPVAG00000012141	TSFM	87	53.333	Pteropus_vampyrus
ENSCVAG00000001340	tsfm	99	79.412	ENSPNYG00000001230	tsfm	99	79.412	Pundamilia_nyererei
ENSCVAG00000001340	tsfm	100	67.532	ENSPNAG00000003241	tsfm	99	67.532	Pygocentrus_nattereri
ENSCVAG00000001340	tsfm	94	50.000	ENSRNOG00000048843	Tsfm	90	50.342	Rattus_norvegicus
ENSCVAG00000001340	tsfm	94	51.351	ENSRBIG00000037278	TSFM	96	53.049	Rhinopithecus_bieti
ENSCVAG00000001340	tsfm	94	51.351	ENSRROG00000031769	TSFM	91	51.667	Rhinopithecus_roxellana
ENSCVAG00000001340	tsfm	94	45.270	ENSSBOG00000021465	TSFM	90	45.667	Saimiri_boliviensis_boliviensis
ENSCVAG00000001340	tsfm	92	53.979	ENSSHAG00000009664	TSFM	84	53.979	Sarcophilus_harrisii
ENSCVAG00000001340	tsfm	98	65.116	ENSSFOG00015014457	tsfm	98	65.116	Scleropages_formosus
ENSCVAG00000001340	tsfm	100	78.502	ENSSMAG00000002467	tsfm	99	78.502	Scophthalmus_maximus
ENSCVAG00000001340	tsfm	100	80.456	ENSSDUG00000006833	tsfm	99	80.456	Seriola_dumerili
ENSCVAG00000001340	tsfm	100	80.782	ENSSLDG00000000715	tsfm	99	80.782	Seriola_lalandi_dorsalis
ENSCVAG00000001340	tsfm	77	40.000	ENSSARG00000000785	-	64	40.201	Sorex_araneus
ENSCVAG00000001340	tsfm	86	52.593	ENSSPUG00000006435	TSFM	97	52.593	Sphenodon_punctatus
ENSCVAG00000001340	tsfm	100	77.850	ENSSPAG00000002548	tsfm	99	77.850	Stegastes_partitus
ENSCVAG00000001340	tsfm	92	53.497	ENSSSCG00000037767	TSFM	74	53.819	Sus_scrofa
ENSCVAG00000001340	tsfm	100	75.082	ENSTRUG00000003081	tsfm	99	75.082	Takifugu_rubripes
ENSCVAG00000001340	tsfm	100	75.082	ENSTNIG00000014578	tsfm	99	75.082	Tetraodon_nigroviridis
ENSCVAG00000001340	tsfm	90	44.224	ENSTBEG00000011603	TSFM	89	44.590	Tupaia_belangeri
ENSCVAG00000001340	tsfm	88	54.182	ENSTTRG00000008351	TSFM	84	54.182	Tursiops_truncatus
ENSCVAG00000001340	tsfm	87	53.875	ENSUAMG00000013142	TSFM	84	54.182	Ursus_americanus
ENSCVAG00000001340	tsfm	87	53.875	ENSUMAG00000020123	TSFM	84	54.182	Ursus_maritimus
ENSCVAG00000001340	tsfm	66	67.532	ENSVPAG00000000209	TSFM	62	67.532	Vicugna_pacos
ENSCVAG00000001340	tsfm	90	50.177	ENSVVUG00000016735	TSFM	87	51.648	Vulpes_vulpes
ENSCVAG00000001340	tsfm	92	54.355	ENSXETG00000009653	tsfm	98	54.355	Xenopus_tropicalis
ENSCVAG00000001340	tsfm	100	84.365	ENSXMAG00000018468	tsfm	100	84.365	Xiphophorus_maculatus