EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCVAG00000001344 (Gene tree)
Gene ID
107086717
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
22095 bases
Position
chrKL652659.1:1170285-1192379
Accession
107086717
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000020142CSDPF00313.224.1e-8115
ENSCVAP00000020142CSDPF00313.224.1e-8125
ENSCVAP00000020142CSDPF00313.224.1e-8135
ENSCVAP00000020142CSDPF00313.224.1e-8145
ENSCVAP00000020142CSDPF00313.224.1e-8155
ENSCVAP00000020154CSDPF00313.221.1e-8015
ENSCVAP00000020154CSDPF00313.221.1e-8025
ENSCVAP00000020154CSDPF00313.221.1e-8035
ENSCVAP00000020154CSDPF00313.221.1e-8045
ENSCVAP00000020154CSDPF00313.221.1e-8055
ENSCVAP00000000421CSDPF00313.221.9e-8015
ENSCVAP00000000421CSDPF00313.221.9e-8025
ENSCVAP00000000421CSDPF00313.221.9e-8035
ENSCVAP00000000421CSDPF00313.221.9e-8045
ENSCVAP00000000421CSDPF00313.221.9e-8055
ENSCVAP00000000431CSDPF00313.222.2e-8015
ENSCVAP00000000431CSDPF00313.222.2e-8025
ENSCVAP00000000431CSDPF00313.222.2e-8035
ENSCVAP00000000431CSDPF00313.222.2e-8045
ENSCVAP00000000431CSDPF00313.222.2e-8055
ENSCVAP00000000420CSDPF00313.222.4e-8015
ENSCVAP00000000420CSDPF00313.222.4e-8025
ENSCVAP00000000420CSDPF00313.222.4e-8035
ENSCVAP00000000420CSDPF00313.222.4e-8045
ENSCVAP00000000420CSDPF00313.222.4e-8055
ENSCVAP00000000427CSDPF00313.224.1e-8015
ENSCVAP00000000427CSDPF00313.224.1e-8025
ENSCVAP00000000427CSDPF00313.224.1e-8035
ENSCVAP00000000427CSDPF00313.224.1e-8045
ENSCVAP00000000427CSDPF00313.224.1e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000015088-5634-ENSCVAP00000000427907 (aa)--
ENSCVAT00000015075-5582XM_015377833ENSCVAP00000000431855 (aa)XP_015233319-
ENSCVAT00000015098-5445XM_015377840ENSCVAP00000000421844 (aa)XP_015233326-
ENSCVAT00000015082-5393XM_015377841ENSCVAP00000020154802 (aa)XP_015233327-
ENSCVAT00000015094-5622XM_015377842ENSCVAP00000000420903 (aa)XP_015233328-
ENSCVAT00000015103-2310-ENSCVAP00000020142769 (aa)--
Gene Model
Click here to download ENSCVAG00000001344's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001344's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000001344csde110076.753ENSG00000009307CSDE110086.029Homo_sapiens
ENSCVAG00000001344csde110092.458ENSAPOG00000015538csde110092.458Acanthochromis_polyacanthus
ENSCVAG00000001344csde110076.104ENSAMEG00000017129CSDE19872.216Ailuropoda_melanoleuca
ENSCVAG00000001344csde18890.909ENSACIG00000015175csde110091.892Amphilophus_citrinellus
ENSCVAG00000001344csde110092.328ENSAOCG00000011510csde110092.328Amphiprion_ocellaris
ENSCVAG00000001344csde110092.458ENSAPEG00000007194csde110092.458Amphiprion_percula
ENSCVAG00000001344csde110091.157ENSATEG00000003864csde110091.157Anabas_testudineus
ENSCVAG00000001344csde110079.064ENSAPLG00000008797CSDE110079.064Anas_platyrhynchos
ENSCVAG00000001344csde110078.758ENSACAG00000003120CSDE110079.125Anolis_carolinensis
ENSCVAG00000001344csde19362.191ENSANAG00000028396-9163.265Aotus_nancymaae
ENSCVAG00000001344csde110076.623ENSANAG00000024665CSDE19875.089Aotus_nancymaae
ENSCVAG00000001344csde110091.678ENSACLG00000013296csde110091.678Astatotilapia_calliptera
ENSCVAG00000001344csde110085.344ENSAMXG00000007436csde110085.344Astyanax_mexicanus
ENSCVAG00000001344csde110076.364ENSBTAG00000000678CSDE110076.364Bos_taurus
ENSCVAG00000001344csde110076.623ENSCJAG00000012565CSDE19875.209Callithrix_jacchus
ENSCVAG00000001344csde19877.188ENSCAFG00000009618CSDE19477.188Canis_familiaris
ENSCVAG00000001344csde110077.013ENSCAFG00020000481CSDE110077.013Canis_lupus_dingo
ENSCVAG00000001344csde110076.494ENSCHIG00000017250CSDE110076.494Capra_hircus
ENSCVAG00000001344csde110076.883ENSTSYG00000003747CSDE110076.883Carlito_syrichta
ENSCVAG00000001344csde110077.914ENSCAPG00000015128CSDE110077.914Cavia_aperea
ENSCVAG00000001344csde110072.195ENSCPOG00000040388CSDE110072.556Cavia_porcellus
ENSCVAG00000001344csde19554.976ENSCCAG00000033677-9954.976Cebus_capucinus
ENSCVAG00000001344csde110076.623ENSCCAG00000036794CSDE110076.500Cebus_capucinus
ENSCVAG00000001344csde19752.423ENSCCAG00000030878-9153.333Cebus_capucinus
ENSCVAG00000001344csde110076.753ENSCATG00000036962CSDE19776.753Cercocebus_atys
ENSCVAG00000001344csde110076.883ENSCLAG00000006618CSDE110076.883Chinchilla_lanigera
ENSCVAG00000001344csde110076.273ENSCSAG00000001658CSDE19875.328Chlorocebus_sabaeus
ENSCVAG00000001344csde110082.524ENSCHOG00000000918CSDE19078.916Choloepus_hoffmanni
ENSCVAG00000001344csde110079.221ENSCPBG00000016547CSDE110079.221Chrysemys_picta_bellii
ENSCVAG00000001344csde19843.276ENSCING00000014465-9842.353Ciona_intestinalis
ENSCVAG00000001344csde19741.880ENSCSAVG00000008100-10041.516Ciona_savignyi
ENSCVAG00000001344csde19079.699ENSCANG00000031069-9479.259Colobus_angolensis_palliatus
ENSCVAG00000001344csde110076.753ENSCANG00000035096CSDE19776.753Colobus_angolensis_palliatus
ENSCVAG00000001344csde110062.468ENSCGRG00001014011-10062.468Cricetulus_griseus_chok1gshd
ENSCVAG00000001344csde110076.104ENSCGRG00001016833-10076.104Cricetulus_griseus_chok1gshd
ENSCVAG00000001344csde19771.586ENSCGRG00000002225-10072.000Cricetulus_griseus_crigri
ENSCVAG00000001344csde110073.478ENSCGRG00000005831-10073.478Cricetulus_griseus_crigri
ENSCVAG00000001344csde110089.337ENSCSEG00000002620csde110089.337Cynoglossus_semilaevis
ENSCVAG00000001344csde110085.056ENSDARG00000074758csde110085.482Danio_rerio
ENSCVAG00000001344csde15953.814ENSDNOG00000034464-9959.350Dasypus_novemcinctus
ENSCVAG00000001344csde110077.143ENSDNOG00000010287-9377.143Dasypus_novemcinctus
ENSCVAG00000001344csde110075.776ENSDORG00000011609Csde110076.125Dipodomys_ordii
ENSCVAG00000001344csde19949.087FBgn0263352Unr8249.084Drosophila_melanogaster
ENSCVAG00000001344csde19068.031ENSETEG00000006280-10068.031Echinops_telfairi
ENSCVAG00000001344csde19959.948ENSETEG00000013678-9959.948Echinops_telfairi
ENSCVAG00000001344csde17953.300ENSETEG00000007109-9953.300Echinops_telfairi
ENSCVAG00000001344csde18880.328ENSETEG00000002491-8670.317Echinops_telfairi
ENSCVAG00000001344csde19955.025ENSEBUG00000008647csde19953.580Eptatretus_burgeri
ENSCVAG00000001344csde110077.143ENSEASG00005006284CSDE110077.000Equus_asinus_asinus
ENSCVAG00000001344csde110077.143ENSECAG00000020885CSDE110077.000Equus_caballus
ENSCVAG00000001344csde19382.243ENSEEUG00000006286CSDE16882.243Erinaceus_europaeus
ENSCVAG00000001344csde110085.899ENSELUG00000015507csde110085.899Esox_lucius
ENSCVAG00000001344csde110077.013ENSFCAG00000029266CSDE110077.013Felis_catus
ENSCVAG00000001344csde110078.607ENSFALG00000003407CSDE110079.000Ficedula_albicollis
ENSCVAG00000001344csde110075.776ENSFDAG00000007882CSDE110076.125Fukomys_damarensis
ENSCVAG00000001344csde110097.015ENSFHEG00000010799csde110097.494Fundulus_heteroclitus
ENSCVAG00000001344csde19987.157ENSGMOG00000012731csde110087.594Gadus_morhua
ENSCVAG00000001344csde19878.454ENSGALG00000002139CSDE19878.854Gallus_gallus
ENSCVAG00000001344csde19496.794ENSGAFG00000005241csde19596.794Gambusia_affinis
ENSCVAG00000001344csde19990.637ENSGACG00000004544csde110091.092Gasterosteus_aculeatus
ENSCVAG00000001344csde110079.091ENSGAGG00000017685CSDE110078.875Gopherus_agassizii
ENSCVAG00000001344csde110076.753ENSGGOG00000002164CSDE110076.753Gorilla_gorilla
ENSCVAG00000001344csde110091.943ENSHBUG00000020315csde110091.943Haplochromis_burtoni
ENSCVAG00000001344csde19966.915ENSHGLG00000008555-10066.915Heterocephalus_glaber_female
ENSCVAG00000001344csde19961.146ENSHGLG00000000650-9961.452Heterocephalus_glaber_female
ENSCVAG00000001344csde110068.701ENSHGLG00000003829-10068.701Heterocephalus_glaber_female
ENSCVAG00000001344csde19966.317ENSHGLG00000007471-9866.317Heterocephalus_glaber_female
ENSCVAG00000001344csde110069.610ENSHGLG00000009620-10070.000Heterocephalus_glaber_female
ENSCVAG00000001344csde19764.097ENSHGLG00000010039-10064.667Heterocephalus_glaber_female
ENSCVAG00000001344csde110064.508ENSHGLG00000019549-10064.706Heterocephalus_glaber_female
ENSCVAG00000001344csde19763.877ENSHGLG00100006910-10064.444Heterocephalus_glaber_male
ENSCVAG00000001344csde110064.286ENSHGLG00100012072-10064.286Heterocephalus_glaber_male
ENSCVAG00000001344csde110076.494ENSHGLG00100019438-10076.494Heterocephalus_glaber_male
ENSCVAG00000001344csde19965.580ENSHGLG00100007287-9865.580Heterocephalus_glaber_male
ENSCVAG00000001344csde19964.516ENSHGLG00100002245-9964.838Heterocephalus_glaber_male
ENSCVAG00000001344csde110062.857ENSHGLG00100001846-10062.857Heterocephalus_glaber_male
ENSCVAG00000001344csde19759.471ENSHGLG00100004833-10060.000Heterocephalus_glaber_male
ENSCVAG00000001344csde19364.395ENSHGLG00100004195-10064.395Heterocephalus_glaber_male
ENSCVAG00000001344csde110090.166ENSHCOG00000004158csde110090.166Hippocampus_comes
ENSCVAG00000001344csde110084.565ENSIPUG00000000355csde110084.565Ictalurus_punctatus
ENSCVAG00000001344csde19060.140ENSSTOG00000032722-9860.508Ictidomys_tridecemlineatus
ENSCVAG00000001344csde110062.883ENSSTOG00000030994-10062.883Ictidomys_tridecemlineatus
ENSCVAG00000001344csde110075.995ENSJJAG00000019571Csde110076.250Jaculus_jaculus
ENSCVAG00000001344csde110092.556ENSKMAG00000005685csde110092.556Kryptolebias_marmoratus
ENSCVAG00000001344csde110091.938ENSLBEG00000014770csde110091.938Labrus_bergylta
ENSCVAG00000001344csde110075.921ENSLACG00000018452CSDE19973.949Latimeria_chalumnae
ENSCVAG00000001344csde110085.162ENSLOCG00000010413csde110083.001Lepisosteus_oculatus
ENSCVAG00000001344csde110076.494ENSLAFG00000007150CSDE19676.494Loxodonta_africana
ENSCVAG00000001344csde110076.753ENSMFAG00000003674CSDE110076.753Macaca_fascicularis
ENSCVAG00000001344csde110076.753ENSMMUG00000001974CSDE110076.753Macaca_mulatta
ENSCVAG00000001344csde110076.753ENSMNEG00000045247CSDE19776.753Macaca_nemestrina
ENSCVAG00000001344csde110076.494ENSMLEG00000038673CSDE19875.089Mandrillus_leucophaeus
ENSCVAG00000001344csde110092.068ENSMAMG00000008821csde110092.068Mastacembelus_armatus
ENSCVAG00000001344csde110091.678ENSMZEG00005021675csde110091.678Maylandia_zebra
ENSCVAG00000001344csde110079.221ENSMGAG00000016381CSDE110079.221Meleagris_gallopavo
ENSCVAG00000001344csde110075.776ENSMAUG00000014031Csde110076.000Mesocricetus_auratus
ENSCVAG00000001344csde110076.883ENSMICG00000002050CSDE19875.388Microcebus_murinus
ENSCVAG00000001344csde110076.104ENSMOCG00000018960Csde110076.104Microtus_ochrogaster
ENSCVAG00000001344csde110092.198ENSMMOG00000015075csde110092.198Mola_mola
ENSCVAG00000001344csde110077.888ENSMODG00000004685CSDE110078.250Monodelphis_domestica
ENSCVAG00000001344csde110092.198ENSMALG00000007132csde110092.198Monopterus_albus
ENSCVAG00000001344csde110076.234MGP_CAROLIEiJ_G0025444Csde110085.430Mus_caroli
ENSCVAG00000001344csde110076.364ENSMUSG00000068823Csde110085.430Mus_musculus
ENSCVAG00000001344csde110076.234MGP_PahariEiJ_G0026888Csde110085.430Mus_pahari
ENSCVAG00000001344csde110076.234MGP_SPRETEiJ_G0026394Csde110085.430Mus_spretus
ENSCVAG00000001344csde19876.679ENSMPUG00000005753CSDE19977.041Mustela_putorius_furo
ENSCVAG00000001344csde110076.463ENSMLUG00000005681CSDE19971.868Myotis_lucifugus
ENSCVAG00000001344csde19750.881ENSNGAG00000012599-10051.111Nannospalax_galili
ENSCVAG00000001344csde110075.652ENSNGAG00000021929Csde110075.875Nannospalax_galili
ENSCVAG00000001344csde110091.678ENSNBRG00000020808csde110091.678Neolamprologus_brichardi
ENSCVAG00000001344csde110076.753ENSNLEG00000004842CSDE19776.753Nomascus_leucogenys
ENSCVAG00000001344csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSCVAG00000001344csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSCVAG00000001344csde110075.776ENSODEG00000007383-10076.125Octodon_degus
ENSCVAG00000001344csde19751.641ENSODEG00000005979-9852.097Octodon_degus
ENSCVAG00000001344csde110089.038ENSONIG00000009309csde110089.474Oreochromis_niloticus
ENSCVAG00000001344csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSCVAG00000001344csde110076.364ENSOCUG00000016438CSDE19975.059Oryctolagus_cuniculus
ENSCVAG00000001344csde110090.507ENSORLG00000000707csde110090.507Oryzias_latipes
ENSCVAG00000001344csde110089.810ENSORLG00020005148csde110089.777Oryzias_latipes_hni
ENSCVAG00000001344csde110090.377ENSORLG00015019415csde110090.377Oryzias_latipes_hsok
ENSCVAG00000001344csde110089.337ENSOMEG00000015656csde110090.117Oryzias_melastigma
ENSCVAG00000001344csde110076.883ENSOGAG00000012127CSDE19873.141Otolemur_garnettii
ENSCVAG00000001344csde110076.494ENSOARG00000020034CSDE19872.575Ovis_aries
ENSCVAG00000001344csde110076.753ENSPPAG00000025861CSDE110076.753Pan_paniscus
ENSCVAG00000001344csde110077.013ENSPPRG00000006747CSDE19875.627Panthera_pardus
ENSCVAG00000001344csde110077.013ENSPTIG00000015468CSDE110076.875Panthera_tigris_altaica
ENSCVAG00000001344csde110076.753ENSPTRG00000033721CSDE110076.625Pan_troglodytes
ENSCVAG00000001344csde110076.753ENSPANG00000018873CSDE110076.753Papio_anubis
ENSCVAG00000001344csde110085.306ENSPKIG00000009459csde110085.306Paramormyrops_kingsleyae
ENSCVAG00000001344csde19682.159ENSPSIG00000003823CSDE19682.119Pelodiscus_sinensis
ENSCVAG00000001344csde110088.442ENSPMGG00000000772csde110088.442Periophthalmus_magnuspinnatus
ENSCVAG00000001344csde110076.025ENSPEMG00000020357-10076.250Peromyscus_maniculatus_bairdii
ENSCVAG00000001344csde110078.012ENSPCIG00000022587CSDE110078.375Phascolarctos_cinereus
ENSCVAG00000001344csde19796.423ENSPFOG00000012664csde110096.423Poecilia_formosa
ENSCVAG00000001344csde19590.476ENSPLAG00000017680csde19390.476Poecilia_latipinna
ENSCVAG00000001344csde19590.783ENSPMEG00000005094csde19590.783Poecilia_mexicana
ENSCVAG00000001344csde110097.038ENSPREG00000011631csde110097.038Poecilia_reticulata
ENSCVAG00000001344csde110076.149ENSPPYG00000000996CSDE110076.500Pongo_abelii
ENSCVAG00000001344csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSCVAG00000001344csde110077.013ENSPCOG00000017893CSDE110077.013Propithecus_coquereli
ENSCVAG00000001344csde19070.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSCVAG00000001344csde110071.818ENSPVAG00000008225CSDE19571.818Pteropus_vampyrus
ENSCVAG00000001344csde110091.678ENSPNYG00000013745csde110091.678Pundamilia_nyererei
ENSCVAG00000001344csde110086.252ENSPNAG00000001958csde110086.252Pygocentrus_nattereri
ENSCVAG00000001344csde110075.776ENSRNOG00000061058Csde110076.000Rattus_norvegicus
ENSCVAG00000001344csde110073.800ENSRBIG00000038088-10073.800Rhinopithecus_bieti
ENSCVAG00000001344csde110072.244ENSRBIG00000038966-9870.714Rhinopithecus_bieti
ENSCVAG00000001344csde110076.753ENSRROG00000043101CSDE19776.753Rhinopithecus_roxellana
ENSCVAG00000001344csde110076.623ENSSBOG00000035592CSDE19875.209Saimiri_boliviensis_boliviensis
ENSCVAG00000001344csde110078.571ENSSHAG00000009831CSDE110078.571Sarcophilus_harrisii
ENSCVAG00000001344csde110095.238ENSSFOG00015007498csde110083.188Scleropages_formosus
ENSCVAG00000001344csde110091.938ENSSMAG00000007203csde110091.938Scophthalmus_maximus
ENSCVAG00000001344csde110092.328ENSSDUG00000015380csde110092.328Seriola_dumerili
ENSCVAG00000001344csde110092.328ENSSLDG00000008819csde110092.328Seriola_lalandi_dorsalis
ENSCVAG00000001344csde110076.494ENSSARG00000000738CSDE19971.938Sorex_araneus
ENSCVAG00000001344csde110079.454ENSSPUG00000008714CSDE110079.454Sphenodon_punctatus
ENSCVAG00000001344csde110092.978ENSSPAG00000000716csde110092.978Stegastes_partitus
ENSCVAG00000001344csde110077.143ENSSSCG00000006752CSDE110077.143Sus_scrofa
ENSCVAG00000001344csde110077.819ENSTGUG00000000972CSDE110078.180Taeniopygia_guttata
ENSCVAG00000001344csde110085.566ENSTRUG00000007996csde110085.566Takifugu_rubripes
ENSCVAG00000001344csde19392.720ENSTNIG00000010878csde110092.720Tetraodon_nigroviridis
ENSCVAG00000001344csde19280.982ENSTBEG00000011880-6080.982Tupaia_belangeri
ENSCVAG00000001344csde110076.494ENSTTRG00000015583CSDE19872.575Tursiops_truncatus
ENSCVAG00000001344csde18972.436ENSUAMG00000024289-9972.436Ursus_americanus
ENSCVAG00000001344csde19282.781ENSUAMG00000021779-9882.353Ursus_americanus
ENSCVAG00000001344csde19770.892ENSUMAG00000011714-9971.564Ursus_maritimus
ENSCVAG00000001344csde110070.519ENSUMAG00000009720-9770.519Ursus_maritimus
ENSCVAG00000001344csde110080.420ENSVPAG00000000749CSDE17980.465Vicugna_pacos
ENSCVAG00000001344csde19375.398ENSVVUG00000009890CSDE19475.802Vulpes_vulpes
ENSCVAG00000001344csde110077.571ENSXETG00000021448csde110077.958Xenopus_tropicalis
ENSCVAG00000001344csde19498.039ENSXCOG00000000035csde18998.039Xiphophorus_couchianus
ENSCVAG00000001344csde110097.038ENSXMAG00000009080csde110097.038Xiphophorus_maculatus

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