EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001366 (Gene tree)
Gene ID: 107099051
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5293 bases
Position: chrKL652528.1:1962645-1967937
Accession: 107099051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000449	tRNA_Me_trans	PF03054.16	1.4e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015053	-	2792	XM_015396996	ENSCVAP00000000449	416 (aa)	XP_015252482	UPI000742B6BE

Gene Model

Click here to download ENSCVAG00000001366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001366	trmu	99	69.471	ENSG00000100416	TRMU	100	78.571	Homo_sapiens
ENSCVAG00000001366	trmu	100	88.010	ENSAPOG00000014458	trmu	100	88.010	Acanthochromis_polyacanthus
ENSCVAG00000001366	trmu	98	70.416	ENSAMEG00000003319	TRMU	98	70.416	Ailuropoda_melanoleuca
ENSCVAG00000001366	trmu	100	85.817	ENSACIG00000002101	trmu	100	85.817	Amphilophus_citrinellus
ENSCVAG00000001366	trmu	100	88.969	ENSAOCG00000013155	trmu	100	88.969	Amphiprion_ocellaris
ENSCVAG00000001366	trmu	100	88.729	ENSAPEG00000013350	trmu	100	88.729	Amphiprion_percula
ENSCVAG00000001366	trmu	100	85.096	ENSATEG00000007814	trmu	100	85.096	Anabas_testudineus
ENSCVAG00000001366	trmu	94	71.465	ENSAPLG00000016380	TRMU	99	71.465	Anas_platyrhynchos
ENSCVAG00000001366	trmu	98	70.874	ENSACAG00000007720	TRMU	99	70.874	Anolis_carolinensis
ENSCVAG00000001366	trmu	99	70.073	ENSANAG00000038053	TRMU	97	70.073	Aotus_nancymaae
ENSCVAG00000001366	trmu	100	87.500	ENSACLG00000005395	trmu	100	87.500	Astatotilapia_calliptera
ENSCVAG00000001366	trmu	99	77.317	ENSAMXG00000005282	trmu	99	77.317	Astyanax_mexicanus
ENSCVAG00000001366	trmu	99	70.192	ENSBTAG00000005595	TRMU	99	70.192	Bos_taurus
ENSCVAG00000001366	trmu	91	39.075	WBGene00007114	mttu-1	98	39.075	Caenorhabditis_elegans
ENSCVAG00000001366	trmu	99	68.434	ENSCJAG00000000198	TRMU	99	68.434	Callithrix_jacchus
ENSCVAG00000001366	trmu	99	70.631	ENSCAFG00000000779	TRMU	98	70.264	Canis_familiaris
ENSCVAG00000001366	trmu	99	70.631	ENSCAFG00020009184	TRMU	98	70.264	Canis_lupus_dingo
ENSCVAG00000001366	trmu	100	70.024	ENSCHIG00000017074	TRMU	100	70.024	Capra_hircus
ENSCVAG00000001366	trmu	95	72.152	ENSTSYG00000003853	TRMU	94	72.152	Carlito_syrichta
ENSCVAG00000001366	trmu	96	65.632	ENSCAPG00000013034	TRMU	98	65.632	Cavia_aperea
ENSCVAG00000001366	trmu	99	69.639	ENSCPOG00000020780	TRMU	99	69.639	Cavia_porcellus
ENSCVAG00000001366	trmu	99	68.750	ENSCCAG00000021641	TRMU	99	68.750	Cebus_capucinus
ENSCVAG00000001366	trmu	99	68.269	ENSCATG00000032800	TRMU	99	68.269	Cercocebus_atys
ENSCVAG00000001366	trmu	99	69.976	ENSCLAG00000017269	TRMU	98	69.976	Chinchilla_lanigera
ENSCVAG00000001366	trmu	99	68.750	ENSCSAG00000005279	TRMU	99	68.750	Chlorocebus_sabaeus
ENSCVAG00000001366	trmu	92	70.256	ENSCPBG00000011621	TRMU	98	70.256	Chrysemys_picta_bellii
ENSCVAG00000001366	trmu	96	46.482	ENSCING00000019371	-	98	46.482	Ciona_intestinalis
ENSCVAG00000001366	trmu	96	69.674	ENSCANG00000041645	TRMU	95	69.674	Colobus_angolensis_palliatus
ENSCVAG00000001366	trmu	99	68.916	ENSCGRG00001001739	Trmu	99	68.916	Cricetulus_griseus_chok1gshd
ENSCVAG00000001366	trmu	99	63.855	ENSCGRG00000002781	Trmu	99	63.855	Cricetulus_griseus_crigri
ENSCVAG00000001366	trmu	99	80.193	ENSCSEG00000012382	trmu	99	80.193	Cynoglossus_semilaevis
ENSCVAG00000001366	trmu	100	74.519	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSCVAG00000001366	trmu	63	57.197	ENSDNOG00000047245	-	98	55.357	Dasypus_novemcinctus
ENSCVAG00000001366	trmu	96	71.178	ENSDORG00000007455	Trmu	97	71.178	Dipodomys_ordii
ENSCVAG00000001366	trmu	93	44.301	FBgn0040337	CG3021	99	43.142	Drosophila_melanogaster
ENSCVAG00000001366	trmu	94	56.489	ENSEBUG00000007454	trmu	100	55.331	Eptatretus_burgeri
ENSCVAG00000001366	trmu	96	71.930	ENSEASG00005021725	TRMU	99	70.264	Equus_asinus_asinus
ENSCVAG00000001366	trmu	96	71.930	ENSECAG00000000467	TRMU	99	70.264	Equus_caballus
ENSCVAG00000001366	trmu	71	51.678	ENSEEUG00000000074	-	71	51.678	Erinaceus_europaeus
ENSCVAG00000001366	trmu	100	78.657	ENSELUG00000009464	trmu	99	80.978	Esox_lucius
ENSCVAG00000001366	trmu	96	72.431	ENSFCAG00000006533	TRMU	99	70.433	Felis_catus
ENSCVAG00000001366	trmu	89	72.368	ENSFALG00000010035	TRMU	96	72.368	Ficedula_albicollis
ENSCVAG00000001366	trmu	93	68.041	ENSFDAG00000017472	TRMU	99	68.041	Fukomys_damarensis
ENSCVAG00000001366	trmu	100	92.067	ENSFHEG00000003162	trmu	100	92.067	Fundulus_heteroclitus
ENSCVAG00000001366	trmu	97	72.167	ENSGMOG00000001323	trmu	99	72.167	Gadus_morhua
ENSCVAG00000001366	trmu	99	70.952	ENSGALG00000031922	TRMU	99	70.952	Gallus_gallus
ENSCVAG00000001366	trmu	98	92.421	ENSGAFG00000013331	trmu	98	92.421	Gambusia_affinis
ENSCVAG00000001366	trmu	100	83.688	ENSGACG00000019024	trmu	100	83.688	Gasterosteus_aculeatus
ENSCVAG00000001366	trmu	99	69.231	ENSGGOG00000000203	TRMU	99	69.231	Gorilla_gorilla
ENSCVAG00000001366	trmu	100	87.019	ENSHBUG00000023421	trmu	100	87.019	Haplochromis_burtoni
ENSCVAG00000001366	trmu	99	68.029	ENSHGLG00000009278	TRMU	99	68.029	Heterocephalus_glaber_female
ENSCVAG00000001366	trmu	99	68.029	ENSHGLG00100018863	TRMU	99	68.029	Heterocephalus_glaber_male
ENSCVAG00000001366	trmu	99	85.783	ENSHCOG00000013459	trmu	99	85.783	Hippocampus_comes
ENSCVAG00000001366	trmu	96	79.950	ENSIPUG00000009785	trmu	98	79.950	Ictalurus_punctatus
ENSCVAG00000001366	trmu	99	69.712	ENSSTOG00000010993	TRMU	99	69.712	Ictidomys_tridecemlineatus
ENSCVAG00000001366	trmu	99	68.675	ENSJJAG00000000667	Trmu	99	68.675	Jaculus_jaculus
ENSCVAG00000001366	trmu	100	85.577	ENSKMAG00000008516	trmu	100	85.577	Kryptolebias_marmoratus
ENSCVAG00000001366	trmu	100	84.856	ENSLBEG00000018831	trmu	100	84.856	Labrus_bergylta
ENSCVAG00000001366	trmu	98	74.217	ENSLACG00000013713	TRMU	99	74.217	Latimeria_chalumnae
ENSCVAG00000001366	trmu	99	77.698	ENSLOCG00000016066	trmu	99	77.698	Lepisosteus_oculatus
ENSCVAG00000001366	trmu	99	60.000	ENSLAFG00000005129	TRMU	99	60.000	Loxodonta_africana
ENSCVAG00000001366	trmu	99	68.750	ENSMFAG00000039767	TRMU	99	68.750	Macaca_fascicularis
ENSCVAG00000001366	trmu	99	68.750	ENSMMUG00000000807	TRMU	99	68.750	Macaca_mulatta
ENSCVAG00000001366	trmu	99	68.750	ENSMNEG00000028164	TRMU	99	68.750	Macaca_nemestrina
ENSCVAG00000001366	trmu	99	68.269	ENSMLEG00000033884	TRMU	99	68.269	Mandrillus_leucophaeus
ENSCVAG00000001366	trmu	100	85.096	ENSMAMG00000004717	trmu	100	85.096	Mastacembelus_armatus
ENSCVAG00000001366	trmu	100	87.500	ENSMZEG00005015797	trmu	100	87.500	Maylandia_zebra
ENSCVAG00000001366	trmu	81	69.388	ENSMGAG00000007550	TRMU	100	69.388	Meleagris_gallopavo
ENSCVAG00000001366	trmu	99	67.952	ENSMAUG00000022282	Trmu	99	67.952	Mesocricetus_auratus
ENSCVAG00000001366	trmu	99	70.316	ENSMICG00000029046	TRMU	99	70.316	Microcebus_murinus
ENSCVAG00000001366	trmu	99	67.952	ENSMOCG00000014641	Trmu	99	67.952	Microtus_ochrogaster
ENSCVAG00000001366	trmu	100	81.490	ENSMMOG00000007229	trmu	100	81.490	Mola_mola
ENSCVAG00000001366	trmu	95	67.920	ENSMODG00000007433	TRMU	93	67.920	Monodelphis_domestica
ENSCVAG00000001366	trmu	100	83.413	ENSMALG00000007721	trmu	100	83.413	Monopterus_albus
ENSCVAG00000001366	trmu	100	68.345	MGP_CAROLIEiJ_G0020134	Trmu	100	68.345	Mus_caroli
ENSCVAG00000001366	trmu	100	68.585	ENSMUSG00000022386	Trmu	100	68.585	Mus_musculus
ENSCVAG00000001366	trmu	100	68.345	MGP_PahariEiJ_G0020139	Trmu	100	68.345	Mus_pahari
ENSCVAG00000001366	trmu	100	68.585	MGP_SPRETEiJ_G0021031	Trmu	100	68.585	Mus_spretus
ENSCVAG00000001366	trmu	99	69.712	ENSMPUG00000002523	TRMU	99	69.712	Mustela_putorius_furo
ENSCVAG00000001366	trmu	99	69.082	ENSNGAG00000005132	Trmu	99	69.082	Nannospalax_galili
ENSCVAG00000001366	trmu	100	87.500	ENSNBRG00000022690	trmu	99	89.250	Neolamprologus_brichardi
ENSCVAG00000001366	trmu	99	68.990	ENSNLEG00000015773	TRMU	99	68.990	Nomascus_leucogenys
ENSCVAG00000001366	trmu	79	59.327	ENSMEUG00000000216	TRMU	99	59.327	Notamacropus_eugenii
ENSCVAG00000001366	trmu	99	69.734	ENSODEG00000014745	TRMU	99	69.471	Octodon_degus
ENSCVAG00000001366	trmu	100	87.260	ENSONIG00000009821	trmu	100	87.260	Oreochromis_niloticus
ENSCVAG00000001366	trmu	89	68.817	ENSOANG00000001891	TRMU	94	68.817	Ornithorhynchus_anatinus
ENSCVAG00000001366	trmu	93	69.330	ENSOCUG00000003664	TRMU	97	68.227	Oryctolagus_cuniculus
ENSCVAG00000001366	trmu	99	81.446	ENSORLG00000019015	trmu	99	81.446	Oryzias_latipes
ENSCVAG00000001366	trmu	99	81.928	ENSORLG00020006830	trmu	99	81.928	Oryzias_latipes_hni
ENSCVAG00000001366	trmu	99	81.928	ENSORLG00015003907	trmu	99	81.928	Oryzias_latipes_hsok
ENSCVAG00000001366	trmu	60	80.321	ENSOMEG00000015541	trmu	90	80.321	Oryzias_melastigma
ENSCVAG00000001366	trmu	99	69.065	ENSOGAG00000008096	TRMU	100	69.065	Otolemur_garnettii
ENSCVAG00000001366	trmu	100	64.508	ENSOARG00000019475	TRMU	100	64.508	Ovis_aries
ENSCVAG00000001366	trmu	99	69.231	ENSPPAG00000033944	TRMU	99	69.231	Pan_paniscus
ENSCVAG00000001366	trmu	96	72.180	ENSPPRG00000004197	TRMU	99	70.192	Panthera_pardus
ENSCVAG00000001366	trmu	67	72.563	ENSPTIG00000014122	TRMU	97	74.242	Panthera_tigris_altaica
ENSCVAG00000001366	trmu	99	69.231	ENSPTRG00000014510	TRMU	99	69.231	Pan_troglodytes
ENSCVAG00000001366	trmu	95	70.380	ENSPANG00000023074	TRMU	97	67.123	Papio_anubis
ENSCVAG00000001366	trmu	99	76.513	ENSPKIG00000002849	trmu	99	76.513	Paramormyrops_kingsleyae
ENSCVAG00000001366	trmu	90	70.942	ENSPSIG00000013020	TRMU	99	70.942	Pelodiscus_sinensis
ENSCVAG00000001366	trmu	100	83.654	ENSPMGG00000004083	trmu	100	83.654	Periophthalmus_magnuspinnatus
ENSCVAG00000001366	trmu	99	68.434	ENSPEMG00000014007	Trmu	99	68.434	Peromyscus_maniculatus_bairdii
ENSCVAG00000001366	trmu	96	66.500	ENSPCIG00000009923	TRMU	97	65.301	Phascolarctos_cinereus
ENSCVAG00000001366	trmu	97	87.901	ENSPFOG00000008197	trmu	91	87.901	Poecilia_formosa
ENSCVAG00000001366	trmu	99	91.546	ENSPLAG00000008414	trmu	99	91.546	Poecilia_latipinna
ENSCVAG00000001366	trmu	100	91.587	ENSPMEG00000004326	trmu	100	91.587	Poecilia_mexicana
ENSCVAG00000001366	trmu	99	92.048	ENSPREG00000007980	trmu	99	92.048	Poecilia_reticulata
ENSCVAG00000001366	trmu	99	69.712	ENSPPYG00000011949	TRMU	99	69.712	Pongo_abelii
ENSCVAG00000001366	trmu	93	62.371	ENSPCAG00000013462	TRMU	99	62.371	Procavia_capensis
ENSCVAG00000001366	trmu	99	68.932	ENSPCOG00000016539	TRMU	99	68.932	Propithecus_coquereli
ENSCVAG00000001366	trmu	96	65.163	ENSPVAG00000013202	TRMU	99	63.942	Pteropus_vampyrus
ENSCVAG00000001366	trmu	100	87.019	ENSPNYG00000005629	trmu	100	87.019	Pundamilia_nyererei
ENSCVAG00000001366	trmu	99	77.616	ENSPNAG00000006339	trmu	96	77.616	Pygocentrus_nattereri
ENSCVAG00000001366	trmu	100	68.106	ENSRNOG00000016465	Trmu	100	68.106	Rattus_norvegicus
ENSCVAG00000001366	trmu	99	67.788	ENSRBIG00000038973	TRMU	99	67.788	Rhinopithecus_bieti
ENSCVAG00000001366	trmu	99	68.029	ENSRROG00000004267	TRMU	99	68.029	Rhinopithecus_roxellana
ENSCVAG00000001366	trmu	91	34.243	YDL033C	SLM3	91	34.243	Saccharomyces_cerevisiae
ENSCVAG00000001366	trmu	99	69.157	ENSSBOG00000030184	TRMU	99	69.157	Saimiri_boliviensis_boliviensis
ENSCVAG00000001366	trmu	91	75.726	ENSSFOG00015020664	trmu	99	75.726	Scleropages_formosus
ENSCVAG00000001366	trmu	100	84.375	ENSSMAG00000019450	trmu	100	84.375	Scophthalmus_maximus
ENSCVAG00000001366	trmu	100	87.019	ENSSDUG00000011913	trmu	100	87.019	Seriola_dumerili
ENSCVAG00000001366	trmu	100	86.779	ENSSLDG00000011684	trmu	100	86.779	Seriola_lalandi_dorsalis
ENSCVAG00000001366	trmu	99	60.145	ENSSPUG00000017123	TRMU	98	60.145	Sphenodon_punctatus
ENSCVAG00000001366	trmu	100	84.375	ENSSPAG00000021875	trmu	100	84.375	Stegastes_partitus
ENSCVAG00000001366	trmu	96	70.927	ENSSSCG00000000007	TRMU	99	68.735	Sus_scrofa
ENSCVAG00000001366	trmu	89	73.190	ENSTGUG00000003663	-	100	73.190	Taeniopygia_guttata
ENSCVAG00000001366	trmu	99	84.746	ENSTRUG00000001231	trmu	100	84.746	Takifugu_rubripes
ENSCVAG00000001366	trmu	99	83.213	ENSTNIG00000010484	trmu	98	83.213	Tetraodon_nigroviridis
ENSCVAG00000001366	trmu	76	53.782	ENSTBEG00000011276	-	81	53.782	Tupaia_belangeri
ENSCVAG00000001366	trmu	95	72.405	ENSTTRG00000004160	TRMU	94	72.405	Tursiops_truncatus
ENSCVAG00000001366	trmu	71	73.559	ENSUAMG00000024825	TRMU	98	73.559	Ursus_americanus
ENSCVAG00000001366	trmu	98	58.680	ENSUMAG00000019079	TRMU	97	73.930	Ursus_maritimus
ENSCVAG00000001366	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSCVAG00000001366	trmu	99	69.231	ENSVVUG00000024963	TRMU	99	69.231	Vulpes_vulpes
ENSCVAG00000001366	trmu	99	72.222	ENSXETG00000023304	trmu	97	72.222	Xenopus_tropicalis
ENSCVAG00000001366	trmu	99	90.670	ENSXCOG00000015105	trmu	99	90.670	Xiphophorus_couchianus
ENSCVAG00000001366	trmu	99	93.012	ENSXMAG00000006697	trmu	99	93.012	Xiphophorus_maculatus