EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000001392 (Gene tree)
Gene ID
107105170
Gene Symbol
si:ch1073-157b13.1
Alias
-
Full Name
7SK snRNA methylphosphate capping enzyme-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
5667 bases
Position
chrKL654611.1:18921-24587
Accession
107105170
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000020191MTSPF05175.144.3e-0511
ENSCVAP00000020181MTSPF05175.140.0001511
ENSCVAP00000020191Bin3PF06859.124.2e-3411
ENSCVAP00000020191Methyltransf_31PF13847.69.4e-1011
ENSCVAP00000020181Methyltransf_31PF13847.61.3e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000015015-2467-ENSCVAP00000020181560 (aa)--
ENSCVAT00000015011-2549XM_015405284ENSCVAP00000020191569 (aa)XP_015260770UPI0007428143
Gene Model
Click here to download ENSCVAG00000001392's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001392's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000001392si:ch1073-157b13.18649.689ENSCVAG00000023449mepce7649.689
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000001392si:ch1073-157b13.19441.294ENSG00000146834MEPCE9843.721Homo_sapiens
ENSCVAG00000001392si:ch1073-157b13.18649.689ENSAPOG00000005209mepce7349.689Acanthochromis_polyacanthus
ENSCVAG00000001392si:ch1073-157b13.18860.512ENSAPOG00000009313-9959.781Acanthochromis_polyacanthus
ENSCVAG00000001392si:ch1073-157b13.15363.609ENSAPOG00000010701-9263.609Acanthochromis_polyacanthus
ENSCVAG00000001392si:ch1073-157b13.19442.689ENSAMEG00000015035MEPCE9042.295Ailuropoda_melanoleuca
ENSCVAG00000001392si:ch1073-157b13.18843.203ENSACIG00000012358mepce8343.667Amphilophus_citrinellus
ENSCVAG00000001392si:ch1073-157b13.18836.000ENSAOCG00000010256mepce8535.987Amphiprion_ocellaris
ENSCVAG00000001392si:ch1073-157b13.19464.931ENSAOCG00000018539si:ch1073-157b13.19967.986Amphiprion_ocellaris
ENSCVAG00000001392si:ch1073-157b13.19167.986ENSAOCG00000018483-9968.165Amphiprion_ocellaris
ENSCVAG00000001392si:ch1073-157b13.18649.068ENSAPEG00000001077mepce7349.068Amphiprion_percula
ENSCVAG00000001392si:ch1073-157b13.110068.699ENSAPEG00000021439-9968.863Amphiprion_percula
ENSCVAG00000001392si:ch1073-157b13.19776.875ENSATEG00000018752si:ch1073-157b13.18776.875Anabas_testudineus
ENSCVAG00000001392si:ch1073-157b13.19774.375ENSATEG00000001673-8774.375Anabas_testudineus
ENSCVAG00000001392si:ch1073-157b13.18846.328ENSATEG00000016877mepce7350.000Anabas_testudineus
ENSCVAG00000001392si:ch1073-157b13.18840.934ENSACAG00000011551MEPCE8241.230Anolis_carolinensis
ENSCVAG00000001392si:ch1073-157b13.19441.860ENSANAG00000035127MEPCE8343.234Aotus_nancymaae
ENSCVAG00000001392si:ch1073-157b13.110064.912ENSACLG00000021966-9965.869Astatotilapia_calliptera
ENSCVAG00000001392si:ch1073-157b13.18653.293ENSAMXG00000033849si:ch1073-157b13.18853.293Astyanax_mexicanus
ENSCVAG00000001392si:ch1073-157b13.16562.393ENSAMXG00000029308mepce7549.383Astyanax_mexicanus
ENSCVAG00000001392si:ch1073-157b13.19441.254ENSBTAG00000016763MEPCE8242.384Bos_taurus
ENSCVAG00000001392si:ch1073-157b13.19441.860ENSCJAG00000015348MEPCE8343.234Callithrix_jacchus
ENSCVAG00000001392si:ch1073-157b13.19342.445ENSCAFG00000014458MEPCE8243.339Canis_familiaris
ENSCVAG00000001392si:ch1073-157b13.19342.445ENSCAFG00020014018MEPCE8243.339Canis_lupus_dingo
ENSCVAG00000001392si:ch1073-157b13.19241.077ENSCHIG00000008713MEPCE8442.237Capra_hircus
ENSCVAG00000001392si:ch1073-157b13.19342.140ENSCPOG00000015225MEPCE8244.027Cavia_porcellus
ENSCVAG00000001392si:ch1073-157b13.19441.528ENSCCAG00000028766MEPCE8343.500Cebus_capucinus
ENSCVAG00000001392si:ch1073-157b13.19441.584ENSCATG00000027605MEPCE8343.306Cercocebus_atys
ENSCVAG00000001392si:ch1073-157b13.19341.639ENSCLAG00000003470MEPCE8544.274Chinchilla_lanigera
ENSCVAG00000001392si:ch1073-157b13.19341.157ENSCSAG00000017894MEPCE8143.428Chlorocebus_sabaeus
ENSCVAG00000001392si:ch1073-157b13.19441.254ENSCANG00000030898MEPCE9843.721Colobus_angolensis_palliatus
ENSCVAG00000001392si:ch1073-157b13.19442.114ENSCGRG00001008844Mepce8543.243Cricetulus_griseus_chok1gshd
ENSCVAG00000001392si:ch1073-157b13.18550.311ENSCSEG00000020220mepce7350.311Cynoglossus_semilaevis
ENSCVAG00000001392si:ch1073-157b13.110060.514ENSCSEG00000005838-9960.514Cynoglossus_semilaevis
ENSCVAG00000001392si:ch1073-157b13.18750.307ENSDARG00000059461mepce7650.307Danio_rerio
ENSCVAG00000001392si:ch1073-157b13.18846.004ENSDARG00000035771MEPCE9044.915Danio_rerio
ENSCVAG00000001392si:ch1073-157b13.19340.894ENSDORG00000005311Mepce9165.517Dipodomys_ordii
ENSCVAG00000001392si:ch1073-157b13.18941.125ENSETEG00000001440-9143.416Echinops_telfairi
ENSCVAG00000001392si:ch1073-157b13.17036.810ENSEBUG00000003854-6337.226Eptatretus_burgeri
ENSCVAG00000001392si:ch1073-157b13.15172.308ENSEBUG00000002563MEPCE8546.907Eptatretus_burgeri
ENSCVAG00000001392si:ch1073-157b13.19440.536ENSEASG00005017074MEPCE8243.170Equus_asinus_asinus
ENSCVAG00000001392si:ch1073-157b13.19440.536ENSECAG00000024124MEPCE8243.170Equus_caballus
ENSCVAG00000001392si:ch1073-157b13.18647.853ENSELUG00000018561mepce7745.644Esox_lucius
ENSCVAG00000001392si:ch1073-157b13.19442.036ENSFCAG00000010803MEPCE8243.421Felis_catus
ENSCVAG00000001392si:ch1073-157b13.19342.470ENSFDAG00000001651MEPCE9943.898Fukomys_damarensis
ENSCVAG00000001392si:ch1073-157b13.18650.617ENSFHEG00000014422mepce7450.617Fundulus_heteroclitus
ENSCVAG00000001392si:ch1073-157b13.15550.774ENSGMOG00000000837-9549.226Gadus_morhua
ENSCVAG00000001392si:ch1073-157b13.18543.089ENSGALG00000048263MEPCE5964.706Gallus_gallus
ENSCVAG00000001392si:ch1073-157b13.19776.087ENSGAFG00000020426si:ch1073-157b13.19975.543Gambusia_affinis
ENSCVAG00000001392si:ch1073-157b13.18751.515ENSGAFG00000003547mepce7551.515Gambusia_affinis
ENSCVAG00000001392si:ch1073-157b13.15867.638ENSGACG00000001158-9668.693Gasterosteus_aculeatus
ENSCVAG00000001392si:ch1073-157b13.18843.939ENSGAGG00000016614MEPCE8745.951Gopherus_agassizii
ENSCVAG00000001392si:ch1073-157b13.19441.611ENSGGOG00000005371MEPCE9843.721Gorilla_gorilla
ENSCVAG00000001392si:ch1073-157b13.19341.472ENSHGLG00000011263MEPCE8443.803Heterocephalus_glaber_female
ENSCVAG00000001392si:ch1073-157b13.19341.472ENSHGLG00100016274MEPCE9343.803Heterocephalus_glaber_male
ENSCVAG00000001392si:ch1073-157b13.18561.460ENSHCOG00000009246-9160.976Hippocampus_comes
ENSCVAG00000001392si:ch1073-157b13.18641.051ENSHCOG00000001737mepce7843.798Hippocampus_comes
ENSCVAG00000001392si:ch1073-157b13.19546.949ENSIPUG00000003387si:ch1073-157b13.18148.829Ictalurus_punctatus
ENSCVAG00000001392si:ch1073-157b13.16266.949ENSIPUG00000021852mepce8547.980Ictalurus_punctatus
ENSCVAG00000001392si:ch1073-157b13.19341.500ENSSTOG00000007568MEPCE8343.074Ictidomys_tridecemlineatus
ENSCVAG00000001392si:ch1073-157b13.19443.612ENSJJAG00000010924Mepce8844.027Jaculus_jaculus
ENSCVAG00000001392si:ch1073-157b13.110070.618ENSKMAG00000007072-9970.067Kryptolebias_marmoratus
ENSCVAG00000001392si:ch1073-157b13.18651.553ENSKMAG00000010102mepce7451.553Kryptolebias_marmoratus
ENSCVAG00000001392si:ch1073-157b13.18652.174ENSLBEG00000002932mepce7452.174Labrus_bergylta
ENSCVAG00000001392si:ch1073-157b13.16963.636ENSLACG00000012355MEPCE9163.971Latimeria_chalumnae
ENSCVAG00000001392si:ch1073-157b13.19440.589ENSLAFG00000012347MEPCE8441.914Loxodonta_africana
ENSCVAG00000001392si:ch1073-157b13.19441.419ENSMFAG00000003007MEPCE8343.594Macaca_fascicularis
ENSCVAG00000001392si:ch1073-157b13.19441.419ENSMMUG00000012724MEPCE8343.594Macaca_mulatta
ENSCVAG00000001392si:ch1073-157b13.19441.419ENSMNEG00000038460MEPCE8343.594Macaca_nemestrina
ENSCVAG00000001392si:ch1073-157b13.18641.367ENSMLEG00000043318MEPCE9844.186Mandrillus_leucophaeus
ENSCVAG00000001392si:ch1073-157b13.18649.689ENSMAMG00000017139mepce9946.847Mastacembelus_armatus
ENSCVAG00000001392si:ch1073-157b13.19781.875ENSMAMG00000011139si:ch1073-157b13.18580.625Mastacembelus_armatus
ENSCVAG00000001392si:ch1073-157b13.110065.072ENSMZEG00005022148-9966.029Maylandia_zebra
ENSCVAG00000001392si:ch1073-157b13.19342.833ENSMAUG00000001456Mepce8443.898Mesocricetus_auratus
ENSCVAG00000001392si:ch1073-157b13.19441.611ENSMICG00000030166MEPCE8243.271Microcebus_murinus
ENSCVAG00000001392si:ch1073-157b13.19341.013ENSMOCG00000015013Mepce8442.308Microtus_ochrogaster
ENSCVAG00000001392si:ch1073-157b13.19962.689ENSMMOG00000011072-9166.790Mola_mola
ENSCVAG00000001392si:ch1073-157b13.19442.593ENSMODG00000004457MEPCE8342.454Monodelphis_domestica
ENSCVAG00000001392si:ch1073-157b13.110062.617ENSMALG00000004684si:ch1073-157b13.19961.371Monopterus_albus
ENSCVAG00000001392si:ch1073-157b13.19341.806MGP_CAROLIEiJ_G0027892Mepce9165.517Mus_caroli
ENSCVAG00000001392si:ch1073-157b13.19341.569ENSMUSG00000029726Mepce9165.517Mus_musculus
ENSCVAG00000001392si:ch1073-157b13.19341.709MGP_SPRETEiJ_G0028897Mepce9165.517Mus_spretus
ENSCVAG00000001392si:ch1073-157b13.19340.850ENSMPUG00000015673MEPCE8242.320Mustela_putorius_furo
ENSCVAG00000001392si:ch1073-157b13.19440.407ENSMLUG00000009678MEPCE8242.379Myotis_lucifugus
ENSCVAG00000001392si:ch1073-157b13.19441.973ENSNGAG00000007098Mepce8642.809Nannospalax_galili
ENSCVAG00000001392si:ch1073-157b13.15165.546ENSNBRG00000021532mepce7055.140Neolamprologus_brichardi
ENSCVAG00000001392si:ch1073-157b13.19964.013ENSNBRG00000006332-9764.345Neolamprologus_brichardi
ENSCVAG00000001392si:ch1073-157b13.18033.333ENSNLEG00000011734MEPCE7534.496Nomascus_leucogenys
ENSCVAG00000001392si:ch1073-157b13.17441.048ENSMEUG00000001370MEPCE7740.083Notamacropus_eugenii
ENSCVAG00000001392si:ch1073-157b13.19442.185ENSOPRG00000014811MEPCE8443.624Ochotona_princeps
ENSCVAG00000001392si:ch1073-157b13.19342.399ENSODEG00000016662MEPCE8544.560Octodon_degus
ENSCVAG00000001392si:ch1073-157b13.18542.911ENSONIG00000005231mepce9843.629Oreochromis_niloticus
ENSCVAG00000001392si:ch1073-157b13.19562.895ENSONIG00000009135-10063.228Oreochromis_niloticus
ENSCVAG00000001392si:ch1073-157b13.19442.589ENSOCUG00000029324MEPCE8543.284Oryctolagus_cuniculus
ENSCVAG00000001392si:ch1073-157b13.15965.094ENSORLG00000027617mepce7649.689Oryzias_latipes
ENSCVAG00000001392si:ch1073-157b13.15965.094ENSORLG00020005817mepce7651.553Oryzias_latipes_hni
ENSCVAG00000001392si:ch1073-157b13.18750.311ENSORLG00015011129mepce7650.311Oryzias_latipes_hsok
ENSCVAG00000001392si:ch1073-157b13.18749.689ENSOMEG00000002027mepce7549.689Oryzias_melastigma
ENSCVAG00000001392si:ch1073-157b13.110068.644ENSOMEG00000007393si:ch1073-157b13.110067.857Oryzias_melastigma
ENSCVAG00000001392si:ch1073-157b13.19442.203ENSOGAG00000034770MEPCE8343.390Otolemur_garnettii
ENSCVAG00000001392si:ch1073-157b13.19441.186ENSOARG00000016948MEPCE8542.219Ovis_aries
ENSCVAG00000001392si:ch1073-157b13.19441.990ENSPPAG00000031579MEPCE8242.717Pan_paniscus
ENSCVAG00000001392si:ch1073-157b13.19442.036ENSPPRG00000002350MEPCE9844.651Panthera_pardus
ENSCVAG00000001392si:ch1073-157b13.19441.990ENSPTRG00000019487MEPCE8342.717Pan_troglodytes
ENSCVAG00000001392si:ch1073-157b13.19441.990ENSPTRG00000050679-8342.717Pan_troglodytes
ENSCVAG00000001392si:ch1073-157b13.19441.419ENSPANG00000022874MEPCE8343.594Papio_anubis
ENSCVAG00000001392si:ch1073-157b13.19343.458ENSPKIG00000021740MEPCE8843.458Paramormyrops_kingsleyae
ENSCVAG00000001392si:ch1073-157b13.19244.500ENSPKIG00000006607mepce7644.500Paramormyrops_kingsleyae
ENSCVAG00000001392si:ch1073-157b13.19243.494ENSPSIG00000007183MEPCE8744.238Pelodiscus_sinensis
ENSCVAG00000001392si:ch1073-157b13.15077.143ENSPMGG00000021503-6777.143Periophthalmus_magnuspinnatus
ENSCVAG00000001392si:ch1073-157b13.18841.506ENSPMGG00000008592mepce9540.752Periophthalmus_magnuspinnatus
ENSCVAG00000001392si:ch1073-157b13.19342.193ENSPEMG00000003157Mepce8443.960Peromyscus_maniculatus_bairdii
ENSCVAG00000001392si:ch1073-157b13.19442.642ENSPCIG00000012285MEPCE8342.434Phascolarctos_cinereus
ENSCVAG00000001392si:ch1073-157b13.18542.831ENSPFOG00000019428mepce9943.863Poecilia_formosa
ENSCVAG00000001392si:ch1073-157b13.19678.584ENSPFOG00000016062si:ch1073-157b13.110078.584Poecilia_formosa
ENSCVAG00000001392si:ch1073-157b13.18850.303ENSPLAG00000014396mepce7550.303Poecilia_latipinna
ENSCVAG00000001392si:ch1073-157b13.110077.233ENSPLAG00000017448si:ch1073-157b13.110077.408Poecilia_latipinna
ENSCVAG00000001392si:ch1073-157b13.18842.779ENSPMEG00000013697mepce9344.161Poecilia_mexicana
ENSCVAG00000001392si:ch1073-157b13.110076.224ENSPMEG00000003971si:ch1073-157b13.110076.399Poecilia_mexicana
ENSCVAG00000001392si:ch1073-157b13.110063.398ENSPREG00000012073-10063.398Poecilia_reticulata
ENSCVAG00000001392si:ch1073-157b13.18750.303ENSPREG00000023111mepce7550.303Poecilia_reticulata
ENSCVAG00000001392si:ch1073-157b13.19142.445ENSPPYG00000017411MEPCE8142.928Pongo_abelii
ENSCVAG00000001392si:ch1073-157b13.19441.322ENSPCOG00000020884MEPCE8242.810Propithecus_coquereli
ENSCVAG00000001392si:ch1073-157b13.19243.674ENSPVAG00000011996MEPCE8344.103Pteropus_vampyrus
ENSCVAG00000001392si:ch1073-157b13.19962.329ENSPNYG00000001274-9762.842Pundamilia_nyererei
ENSCVAG00000001392si:ch1073-157b13.18850.617ENSPNAG00000015662mepce7150.617Pygocentrus_nattereri
ENSCVAG00000001392si:ch1073-157b13.18843.660ENSPNAG00000013102si:ch1073-157b13.18843.981Pygocentrus_nattereri
ENSCVAG00000001392si:ch1073-157b13.19342.809ENSRNOG00000001387LOC1009105408444.182Rattus_norvegicus
ENSCVAG00000001392si:ch1073-157b13.19342.809ENSRNOG00000045911Mepce8444.182Rattus_norvegicus
ENSCVAG00000001392si:ch1073-157b13.17838.174ENSRBIG00000032270-7940.042Rhinopithecus_bieti
ENSCVAG00000001392si:ch1073-157b13.19441.021ENSRBIG00000027050MEPCE8342.384Rhinopithecus_bieti
ENSCVAG00000001392si:ch1073-157b13.19441.254ENSRROG00000031225MEPCE8343.428Rhinopithecus_roxellana
ENSCVAG00000001392si:ch1073-157b13.19441.764ENSSBOG00000011382MEPCE9843.256Saimiri_boliviensis_boliviensis
ENSCVAG00000001392si:ch1073-157b13.18752.047ENSSFOG00015018048mepce7052.071Scleropages_formosus
ENSCVAG00000001392si:ch1073-157b13.18550.311ENSSMAG00000013182mepce7350.311Scophthalmus_maximus
ENSCVAG00000001392si:ch1073-157b13.110062.500ENSSMAG00000004830-9962.975Scophthalmus_maximus
ENSCVAG00000001392si:ch1073-157b13.19661.302ENSSDUG00000006422-9161.429Seriola_dumerili
ENSCVAG00000001392si:ch1073-157b13.16066.387ENSSDUG00000008253mepce7449.068Seriola_dumerili
ENSCVAG00000001392si:ch1073-157b13.19163.112ENSSLDG00000019673-9863.763Seriola_lalandi_dorsalis
ENSCVAG00000001392si:ch1073-157b13.18342.065ENSSPUG00000004856MEPCE6741.954Sphenodon_punctatus
ENSCVAG00000001392si:ch1073-157b13.18649.689ENSSPAG00000001215mepce7349.689Stegastes_partitus
ENSCVAG00000001392si:ch1073-157b13.110069.687ENSSPAG00000008313-9969.687Stegastes_partitus
ENSCVAG00000001392si:ch1073-157b13.19341.021ENSSSCG00000023680MEPCE8241.860Sus_scrofa
ENSCVAG00000001392si:ch1073-157b13.110061.477ENSTRUG00000001890-9961.156Takifugu_rubripes
ENSCVAG00000001392si:ch1073-157b13.16163.793ENSTRUG00000023614mepce9138.245Takifugu_rubripes
ENSCVAG00000001392si:ch1073-157b13.19340.266ENSTTRG00000008873MEPCE8242.327Tursiops_truncatus
ENSCVAG00000001392si:ch1073-157b13.18540.395ENSUAMG00000026470MEPCE7941.577Ursus_americanus
ENSCVAG00000001392si:ch1073-157b13.19340.228ENSUMAG00000010719MEPCE9041.639Ursus_maritimus
ENSCVAG00000001392si:ch1073-157b13.19342.712ENSVVUG00000023418MEPCE8243.771Vulpes_vulpes
ENSCVAG00000001392si:ch1073-157b13.18942.734ENSXCOG00000007070mepce9043.029Xiphophorus_couchianus
ENSCVAG00000001392si:ch1073-157b13.19771.583ENSXCOG00000013140-9571.942Xiphophorus_couchianus
ENSCVAG00000001392si:ch1073-157b13.110075.306ENSXMAG00000016250si:ch1073-157b13.110076.532Xiphophorus_maculatus
ENSCVAG00000001392si:ch1073-157b13.18949.697ENSXMAG00000027456mepce7649.697Xiphophorus_maculatus

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