EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000001397 (Gene tree)
Gene ID: 107102695
Gene Symbol: zgc:171929
Alias: -
Full Name: putative transcription factor ovo-like protein 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8193 bases
Position: chrKL653799.1:75377-83569
Accession: 107102695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000475	zf-C2H2	PF00096.26	1.9e-16	1	3
ENSCVAP00000000475	zf-C2H2	PF00096.26	1.9e-16	2	3
ENSCVAP00000000475	zf-C2H2	PF00096.26	1.9e-16	3	3
ENSCVAP00000000475	zf-met	PF12874.7	0.00044	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015005	-	1613	XM_015402099	ENSCVAP00000000475	274 (aa)	XP_015257585	UPI000742A1B6

Gene Model

Click here to download ENSCVAG00000001397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000001397	zgc:171929	55	44.737	ENSCVAG00000023054	-	56	44.737
ENSCVAG00000001397	zgc:171929	59	41.509	ENSCVAG00000000227	-	69	41.509
ENSCVAG00000001397	zgc:171929	68	39.130	ENSCVAG00000004958	-	56	39.130
ENSCVAG00000001397	zgc:171929	62	41.176	ENSCVAG00000003601	ZNF319	60	41.176
ENSCVAG00000001397	zgc:171929	68	44.156	ENSCVAG00000001609	-	72	44.156
ENSCVAG00000001397	zgc:171929	72	30.909	ENSCVAG00000017168	gfi1b	57	30.909
ENSCVAG00000001397	zgc:171929	91	36.709	ENSCVAG00000012543	-	83	40.260
ENSCVAG00000001397	zgc:171929	55	33.113	ENSCVAG00000016915	-	51	33.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001397	zgc:171929	100	64.964	ENSAPOG00000006365	zgc:171929	98	65.328	Acanthochromis_polyacanthus
ENSCVAG00000001397	zgc:171929	100	66.423	ENSAOCG00000010460	zgc:171929	98	66.423	Amphiprion_ocellaris
ENSCVAG00000001397	zgc:171929	61	57.059	ENSAPLG00000016199	OVOL2	92	57.059	Anas_platyrhynchos
ENSCVAG00000001397	zgc:171929	63	52.174	ENSACAG00000014216	OVOL2	72	52.174	Anolis_carolinensis
ENSCVAG00000001397	zgc:171929	54	64.000	ENSTSYG00000012790	OVOL2	74	64.000	Carlito_syrichta
ENSCVAG00000001397	zgc:171929	91	43.346	ENSCPBG00000023454	OVOL2	92	44.961	Chrysemys_picta_bellii
ENSCVAG00000001397	zgc:171929	51	64.789	ENSCANG00000033179	OVOL2	62	64.789	Colobus_angolensis_palliatus
ENSCVAG00000001397	zgc:171929	91	43.083	ENSDORG00000016697	Ovol2	91	44.402	Dipodomys_ordii
ENSCVAG00000001397	zgc:171929	100	59.864	ENSELUG00000020356	zgc:171929	99	60.204	Esox_lucius
ENSCVAG00000001397	zgc:171929	55	59.494	ENSFCAG00000027530	OVOL2	92	45.525	Felis_catus
ENSCVAG00000001397	zgc:171929	91	46.388	ENSFALG00000007594	OVOL2	92	46.388	Ficedula_albicollis
ENSCVAG00000001397	zgc:171929	51	65.734	ENSFDAG00000008730	OVOL2	85	65.734	Fukomys_damarensis
ENSCVAG00000001397	zgc:171929	91	44.747	ENSGAGG00000020202	OVOL2	92	44.747	Gopherus_agassizii
ENSCVAG00000001397	zgc:171929	91	45.098	ENSHGLG00000016810	OVOL2	91	45.098	Heterocephalus_glaber_female
ENSCVAG00000001397	zgc:171929	50	81.022	ENSHCOG00000007100	zgc:171929	76	81.022	Hippocampus_comes
ENSCVAG00000001397	zgc:171929	100	69.424	ENSLBEG00000006082	zgc:171929	100	69.424	Labrus_bergylta
ENSCVAG00000001397	zgc:171929	90	43.320	ENSLACG00000011247	OVOL2	91	43.320	Latimeria_chalumnae
ENSCVAG00000001397	zgc:171929	100	64.964	ENSMAMG00000021196	zgc:171929	100	64.964	Mastacembelus_armatus
ENSCVAG00000001397	zgc:171929	54	61.745	ENSMGAG00000006770	OVOL2	86	61.745	Meleagris_gallopavo
ENSCVAG00000001397	zgc:171929	59	58.929	ENSMICG00000032455	OVOL2	91	45.076	Microcebus_murinus
ENSCVAG00000001397	zgc:171929	55	60.759	MGP_CAROLIEiJ_G0024381	Ovol2	91	45.736	Mus_caroli
ENSCVAG00000001397	zgc:171929	55	60.759	ENSMUSG00000037279	Ovol2	91	45.736	Mus_musculus
ENSCVAG00000001397	zgc:171929	55	60.759	MGP_PahariEiJ_G0025825	Ovol2	91	45.736	Mus_pahari
ENSCVAG00000001397	zgc:171929	55	60.759	MGP_SPRETEiJ_G0025300	Ovol2	91	45.736	Mus_spretus
ENSCVAG00000001397	zgc:171929	100	68.345	ENSONIG00000004778	zgc:171929	100	68.345	Oreochromis_niloticus
ENSCVAG00000001397	zgc:171929	100	65.091	ENSORLG00015015191	zgc:171929	100	65.091	Oryzias_latipes_hsok
ENSCVAG00000001397	zgc:171929	55	60.759	ENSOGAG00000030325	OVOL2	58	60.759	Otolemur_garnettii
ENSCVAG00000001397	zgc:171929	55	59.494	ENSPPRG00000006276	OVOL2	91	44.402	Panthera_pardus
ENSCVAG00000001397	zgc:171929	62	93.567	ENSPMEG00000005347	zgc:171929	85	93.567	Poecilia_mexicana
ENSCVAG00000001397	zgc:171929	55	60.127	ENSPCOG00000013518	OVOL2	91	45.076	Propithecus_coquereli
ENSCVAG00000001397	zgc:171929	84	72.103	ENSSMAG00000003204	zgc:171929	97	72.103	Scophthalmus_maximus
ENSCVAG00000001397	zgc:171929	76	51.442	ENSSPUG00000001720	OVOL2	87	56.725	Sphenodon_punctatus
ENSCVAG00000001397	zgc:171929	62	88.304	ENSSPAG00000001700	zgc:171929	78	88.304	Stegastes_partitus
ENSCVAG00000001397	zgc:171929	52	63.699	ENSVVUG00000013094	OVOL2	63	56.284	Vulpes_vulpes
ENSCVAG00000001397	zgc:171929	91	45.000	ENSXETG00000020587	ovol1	94	45.000	Xenopus_tropicalis
ENSCVAG00000001397	zgc:171929	91	44.528	ENSXETG00000024897	ovol2	92	44.528	Xenopus_tropicalis
ENSCVAG00000001397	zgc:171929	100	67.518	ENSXMAG00000022405	zgc:171929	100	67.518	Xiphophorus_maculatus