EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4945 bases
Position: chrKL652547.1:1450306-1455250
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000484	La	PF05383.17	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014986	-	522	-	ENSCVAP00000000484	173 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000001411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001411	-	89	68.553	ENSG00000161813	LARP4	84	68.553	Homo_sapiens
ENSCVAG00000001411	-	87	66.242	ENSACIG00000001198	larp4aa	87	66.242	Amphilophus_citrinellus
ENSCVAG00000001411	-	92	66.860	ENSACIG00000000370	-	87	66.860	Amphilophus_citrinellus
ENSCVAG00000001411	-	96	71.512	ENSAPEG00000015441	larp4ab	80	71.512	Amphiprion_percula
ENSCVAG00000001411	-	97	67.956	ENSACLG00000000777	larp4ab	51	67.956	Astatotilapia_calliptera
ENSCVAG00000001411	-	75	54.815	ENSCCAG00000030343	-	74	54.815	Cebus_capucinus
ENSCVAG00000001411	-	87	55.769	ENSCATG00000039611	-	82	55.769	Cercocebus_atys
ENSCVAG00000001411	-	71	75.610	ENSCANG00000033097	-	53	75.610	Colobus_angolensis_palliatus
ENSCVAG00000001411	-	87	63.226	ENSCGRG00001011032	-	69	63.226	Cricetulus_griseus_chok1gshd
ENSCVAG00000001411	-	87	66.452	ENSCGRG00001011674	-	73	66.452	Cricetulus_griseus_chok1gshd
ENSCVAG00000001411	-	87	64.516	ENSCGRG00001000311	-	81	64.516	Cricetulus_griseus_chok1gshd
ENSCVAG00000001411	-	89	65.823	ENSCGRG00000000087	-	85	65.823	Cricetulus_griseus_crigri
ENSCVAG00000001411	-	88	67.702	ENSDARG00000074979	larp4ab	79	74.286	Danio_rerio
ENSCVAG00000001411	-	85	64.901	ENSFDAG00000003796	-	83	64.901	Fukomys_damarensis
ENSCVAG00000001411	-	95	69.714	ENSHBUG00000021929	-	84	69.714	Haplochromis_burtoni
ENSCVAG00000001411	-	87	61.290	ENSHGLG00100000622	-	71	62.745	Heterocephalus_glaber_male
ENSCVAG00000001411	-	69	79.167	ENSJJAG00000014649	-	67	81.739	Jaculus_jaculus
ENSCVAG00000001411	-	87	56.410	ENSMFAG00000001037	-	82	56.410	Macaca_fascicularis
ENSCVAG00000001411	-	87	56.410	ENSMMUG00000045683	-	82	56.410	Macaca_mulatta
ENSCVAG00000001411	-	79	54.610	ENSMNEG00000037799	-	77	54.610	Macaca_nemestrina
ENSCVAG00000001411	-	92	54.878	ENSMLEG00000038232	-	92	54.878	Mandrillus_leucophaeus
ENSCVAG00000001411	-	97	67.956	ENSMZEG00005007771	larp4ab	51	67.956	Maylandia_zebra
ENSCVAG00000001411	-	88	65.584	ENSMICG00000030156	-	68	68.027	Microcebus_murinus
ENSCVAG00000001411	-	85	68.421	ENSMICG00000046883	-	83	68.421	Microcebus_murinus
ENSCVAG00000001411	-	65	66.379	ENSMODG00000004844	-	55	66.379	Monodelphis_domestica
ENSCVAG00000001411	-	90	69.048	ENSMALG00000015637	-	72	69.048	Monopterus_albus
ENSCVAG00000001411	-	80	72.662	ENSMALG00000018631	larp4aa	78	69.655	Monopterus_albus
ENSCVAG00000001411	-	98	65.746	ENSNBRG00000015675	larp4ab	96	65.746	Neolamprologus_brichardi
ENSCVAG00000001411	-	95	61.582	ENSORLG00000018835	-	84	61.582	Oryzias_latipes
ENSCVAG00000001411	-	95	60.452	ENSORLG00020009602	-	84	60.452	Oryzias_latipes_hni
ENSCVAG00000001411	-	95	62.147	ENSORLG00015005865	-	86	62.147	Oryzias_latipes_hsok
ENSCVAG00000001411	-	90	65.854	ENSOMEG00000008561	-	85	65.854	Oryzias_melastigma
ENSCVAG00000001411	-	67	83.621	ENSOMEG00000019749	larp4aa	68	76.744	Oryzias_melastigma
ENSCVAG00000001411	-	67	84.483	ENSPMGG00000023289	-	76	84.483	Periophthalmus_magnuspinnatus
ENSCVAG00000001411	-	80	54.930	ENSPMAG00000001038	-	56	54.930	Petromyzon_marinus
ENSCVAG00000001411	-	99	72.432	ENSPREG00000016263	larp4ab	82	75.287	Poecilia_reticulata
ENSCVAG00000001411	-	65	60.169	ENSPPYG00000006330	-	53	60.169	Pongo_abelii
ENSCVAG00000001411	-	95	69.714	ENSPNYG00000000915	-	72	69.714	Pundamilia_nyererei
ENSCVAG00000001411	-	65	66.102	ENSRNOG00000057943	AABR07058884.2	54	66.102	Rattus_norvegicus
ENSCVAG00000001411	-	71	58.400	ENSSBOG00000035851	-	66	58.400	Saimiri_boliviensis_boliviensis
ENSCVAG00000001411	-	88	64.634	ENSSPAG00000007222	larp4aa	60	84.483	Stegastes_partitus
ENSCVAG00000001411	-	99	73.514	ENSXCOG00000019635	larp4ab	81	76.301	Xiphophorus_couchianus