EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000001462 (Gene tree)
Gene ID: 107097377
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 38087 bases
Position: chrKL653190.1:219024-257110
Accession: 107097377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000529	GTP_EFTU	PF00009.27	5.4e-48	1	1
ENSCVAP00000000529	MMR_HSR1	PF01926.23	3.4e-06	1	1
ENSCVAP00000000529	GTP_EFTU_D2	PF03144.25	1.4e-09	1	1
ENSCVAP00000000529	GTP_EFTU_D3	PF03143.17	8.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014911	-	3378	XM_015394507	ENSCVAP00000000529	702 (aa)	XP_015249993	UPI000742C680

Gene Model

Click here to download ENSCVAG00000001462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000001462	hbs1l	60	41.882	ENSCVAG00000000869	GSPT1	72	41.882
ENSCVAG00000001462	hbs1l	54	36.317	ENSCVAG00000016392	-	75	35.990
ENSCVAG00000001462	hbs1l	61	33.937	ENSCVAG00000019378	-	95	33.937
ENSCVAG00000001462	hbs1l	61	38.462	ENSCVAG00000009828	si:dkey-37o8.1	96	38.462
ENSCVAG00000001462	hbs1l	61	42.563	ENSCVAG00000019356	-	95	42.563
ENSCVAG00000001462	hbs1l	58	41.247	ENSCVAG00000021241	-	98	41.247
ENSCVAG00000001462	hbs1l	60	41.284	ENSCVAG00000009938	eef1a1b	94	41.284
ENSCVAG00000001462	hbs1l	60	41.055	ENSCVAG00000002957	-	94	41.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001462	hbs1l	100	71.489	ENSG00000112339	HBS1L	95	86.335	Homo_sapiens
ENSCVAG00000001462	hbs1l	81	91.421	ENSAPOG00000013169	hbs1l	91	91.421	Acanthochromis_polyacanthus
ENSCVAG00000001462	hbs1l	99	71.469	ENSAMEG00000009749	HBS1L	99	71.248	Ailuropoda_melanoleuca
ENSCVAG00000001462	hbs1l	76	87.709	ENSACIG00000017087	hbs1l	91	87.709	Amphilophus_citrinellus
ENSCVAG00000001462	hbs1l	100	84.801	ENSAPEG00000008320	hbs1l	100	84.801	Amphiprion_percula
ENSCVAG00000001462	hbs1l	100	86.080	ENSATEG00000004459	hbs1l	100	85.938	Anabas_testudineus
ENSCVAG00000001462	hbs1l	98	69.353	ENSAPLG00000007791	HBS1L	100	68.777	Anas_platyrhynchos
ENSCVAG00000001462	hbs1l	100	70.496	ENSACAG00000010120	HBS1L	100	70.496	Anolis_carolinensis
ENSCVAG00000001462	hbs1l	100	71.246	ENSANAG00000038076	HBS1L	100	71.246	Aotus_nancymaae
ENSCVAG00000001462	hbs1l	100	85.917	ENSACLG00000010469	hbs1l	100	85.917	Astatotilapia_calliptera
ENSCVAG00000001462	hbs1l	100	76.869	ENSAMXG00000004260	hbs1l	97	83.333	Astyanax_mexicanus
ENSCVAG00000001462	hbs1l	100	72.238	ENSBTAG00000020174	HBS1L	100	71.671	Bos_taurus
ENSCVAG00000001462	hbs1l	61	49.306	WBGene00010622	K07A12.4	72	49.306	Caenorhabditis_elegans
ENSCVAG00000001462	hbs1l	100	71.955	ENSCJAG00000007678	HBS1L	95	89.130	Callithrix_jacchus
ENSCVAG00000001462	hbs1l	100	70.986	ENSCAFG00000000226	HBS1L	100	70.827	Canis_familiaris
ENSCVAG00000001462	hbs1l	100	70.986	ENSCAFG00020021904	HBS1L	100	70.827	Canis_lupus_dingo
ENSCVAG00000001462	hbs1l	100	71.955	ENSCHIG00000010299	HBS1L	100	71.388	Capra_hircus
ENSCVAG00000001462	hbs1l	100	69.830	ENSTSYG00000007089	HBS1L	100	84.783	Carlito_syrichta
ENSCVAG00000001462	hbs1l	99	62.659	ENSCPOG00000007015	HBS1L	99	62.606	Cavia_porcellus
ENSCVAG00000001462	hbs1l	100	69.972	ENSCCAG00000033863	HBS1L	100	71.961	Cebus_capucinus
ENSCVAG00000001462	hbs1l	100	71.671	ENSCATG00000043042	HBS1L	94	89.130	Cercocebus_atys
ENSCVAG00000001462	hbs1l	100	70.397	ENSCLAG00000004937	HBS1L	100	70.255	Chinchilla_lanigera
ENSCVAG00000001462	hbs1l	100	71.388	ENSCSAG00000016791	HBS1L	100	71.388	Chlorocebus_sabaeus
ENSCVAG00000001462	hbs1l	97	56.623	ENSCHOG00000001852	HBS1L	99	55.764	Choloepus_hoffmanni
ENSCVAG00000001462	hbs1l	100	70.680	ENSCPBG00000017635	HBS1L	100	70.680	Chrysemys_picta_bellii
ENSCVAG00000001462	hbs1l	99	48.560	ENSCING00000005592	-	99	48.560	Ciona_intestinalis
ENSCVAG00000001462	hbs1l	89	62.555	ENSCSAVG00000002297	-	99	62.555	Ciona_savignyi
ENSCVAG00000001462	hbs1l	100	70.922	ENSCANG00000031208	HBS1L	94	89.130	Colobus_angolensis_palliatus
ENSCVAG00000001462	hbs1l	100	71.429	ENSCGRG00001024531	Hbs1l	100	70.863	Cricetulus_griseus_chok1gshd
ENSCVAG00000001462	hbs1l	100	71.429	ENSCGRG00000017361	Hbs1l	100	70.863	Cricetulus_griseus_crigri
ENSCVAG00000001462	hbs1l	99	83.926	ENSCSEG00000002794	hbs1l	94	83.642	Cynoglossus_semilaevis
ENSCVAG00000001462	hbs1l	100	77.054	ENSDARG00000036778	hbs1l	100	77.054	Danio_rerio
ENSCVAG00000001462	hbs1l	100	70.940	ENSDORG00000005958	Hbs1l	100	70.739	Dipodomys_ordii
ENSCVAG00000001462	hbs1l	99	46.473	FBgn0042712	HBS1	100	47.010	Drosophila_melanogaster
ENSCVAG00000001462	hbs1l	100	66.572	ENSETEG00000000913	HBS1L	100	65.864	Echinops_telfairi
ENSCVAG00000001462	hbs1l	87	68.784	ENSEBUG00000010759	hbs1l	100	64.019	Eptatretus_burgeri
ENSCVAG00000001462	hbs1l	100	70.381	ENSEASG00005011148	HBS1L	100	69.382	Equus_asinus_asinus
ENSCVAG00000001462	hbs1l	100	69.846	ENSECAG00000004470	HBS1L	100	69.242	Equus_caballus
ENSCVAG00000001462	hbs1l	100	66.949	ENSEEUG00000013582	HBS1L	100	66.949	Erinaceus_europaeus
ENSCVAG00000001462	hbs1l	89	75.720	ENSELUG00000006444	hbs1l	96	75.720	Esox_lucius
ENSCVAG00000001462	hbs1l	100	71.489	ENSFCAG00000001810	HBS1L	96	89.130	Felis_catus
ENSCVAG00000001462	hbs1l	87	71.082	ENSFALG00000011898	HBS1L	100	71.082	Ficedula_albicollis
ENSCVAG00000001462	hbs1l	100	70.721	ENSFDAG00000011841	HBS1L	100	70.580	Fukomys_damarensis
ENSCVAG00000001462	hbs1l	100	91.595	ENSFHEG00000006942	hbs1l	100	91.595	Fundulus_heteroclitus
ENSCVAG00000001462	hbs1l	99	77.983	ENSGMOG00000011843	hbs1l	100	78.125	Gadus_morhua
ENSCVAG00000001462	hbs1l	100	70.397	ENSGALG00000013962	HBS1L	100	69.405	Gallus_gallus
ENSCVAG00000001462	hbs1l	100	91.453	ENSGAFG00000004157	hbs1l	100	91.453	Gambusia_affinis
ENSCVAG00000001462	hbs1l	99	81.792	ENSGACG00000011035	hbs1l	100	81.935	Gasterosteus_aculeatus
ENSCVAG00000001462	hbs1l	100	70.156	ENSGAGG00000002033	HBS1L	100	69.535	Gopherus_agassizii
ENSCVAG00000001462	hbs1l	78	72.645	ENSGGOG00000034956	-	93	81.720	Gorilla_gorilla
ENSCVAG00000001462	hbs1l	100	86.060	ENSHBUG00000013424	hbs1l	100	86.060	Haplochromis_burtoni
ENSCVAG00000001462	hbs1l	100	70.638	ENSHGLG00000000516	HBS1L	100	69.274	Heterocephalus_glaber_female
ENSCVAG00000001462	hbs1l	100	70.638	ENSHGLG00100003550	HBS1L	100	69.274	Heterocephalus_glaber_male
ENSCVAG00000001462	hbs1l	100	81.792	ENSHCOG00000007581	hbs1l	94	80.802	Hippocampus_comes
ENSCVAG00000001462	hbs1l	100	75.710	ENSIPUG00000010748	hbs1l	100	75.142	Ictalurus_punctatus
ENSCVAG00000001462	hbs1l	100	71.994	ENSSTOG00000007551	HBS1L	100	71.530	Ictidomys_tridecemlineatus
ENSCVAG00000001462	hbs1l	100	55.666	ENSJJAG00000012660	-	100	55.666	Jaculus_jaculus
ENSCVAG00000001462	hbs1l	99	68.839	ENSJJAG00000017024	-	97	68.892	Jaculus_jaculus
ENSCVAG00000001462	hbs1l	100	86.325	ENSKMAG00000012130	hbs1l	100	86.747	Kryptolebias_marmoratus
ENSCVAG00000001462	hbs1l	100	86.040	ENSLBEG00000002784	hbs1l	100	86.585	Labrus_bergylta
ENSCVAG00000001462	hbs1l	69	77.551	ENSLACG00000004528	HBS1L	99	77.551	Latimeria_chalumnae
ENSCVAG00000001462	hbs1l	100	74.471	ENSLOCG00000016221	hbs1l	100	74.471	Lepisosteus_oculatus
ENSCVAG00000001462	hbs1l	100	69.209	ENSLAFG00000007835	HBS1L	100	68.883	Loxodonta_africana
ENSCVAG00000001462	hbs1l	100	71.773	ENSMFAG00000003766	HBS1L	96	89.130	Macaca_fascicularis
ENSCVAG00000001462	hbs1l	90	76.727	ENSMMUG00000004802	HBS1L	96	89.130	Macaca_mulatta
ENSCVAG00000001462	hbs1l	100	71.773	ENSMNEG00000043942	HBS1L	96	89.130	Macaca_nemestrina
ENSCVAG00000001462	hbs1l	99	71.368	ENSMLEG00000043218	HBS1L	94	89.130	Mandrillus_leucophaeus
ENSCVAG00000001462	hbs1l	100	84.659	ENSMAMG00000016498	hbs1l	98	88.015	Mastacembelus_armatus
ENSCVAG00000001462	hbs1l	100	85.917	ENSMZEG00005015575	hbs1l	100	85.917	Maylandia_zebra
ENSCVAG00000001462	hbs1l	77	87.918	ENSMZEG00005024018	-	90	87.918	Maylandia_zebra
ENSCVAG00000001462	hbs1l	99	68.902	ENSMGAG00000013065	HBS1L	99	68.902	Meleagris_gallopavo
ENSCVAG00000001462	hbs1l	100	71.489	ENSMAUG00000001077	Hbs1l	100	71.570	Mesocricetus_auratus
ENSCVAG00000001462	hbs1l	100	60.311	ENSMICG00000030043	-	96	79.570	Microcebus_murinus
ENSCVAG00000001462	hbs1l	99	67.756	ENSMICG00000001533	-	99	67.756	Microcebus_murinus
ENSCVAG00000001462	hbs1l	100	71.146	ENSMOCG00000023038	Hbs1l	100	71.227	Microtus_ochrogaster
ENSCVAG00000001462	hbs1l	97	85.191	ENSMMOG00000015507	hbs1l	100	85.191	Mola_mola
ENSCVAG00000001462	hbs1l	100	69.846	ENSMODG00000017499	HBS1L	100	69.846	Monodelphis_domestica
ENSCVAG00000001462	hbs1l	100	85.775	ENSMALG00000010768	hbs1l	100	85.775	Monopterus_albus
ENSCVAG00000001462	hbs1l	100	71.127	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.986	Mus_caroli
ENSCVAG00000001462	hbs1l	100	71.429	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSCVAG00000001462	hbs1l	100	71.127	MGP_PahariEiJ_G0023782	Hbs1l	100	71.348	Mus_pahari
ENSCVAG00000001462	hbs1l	100	71.268	MGP_SPRETEiJ_G0015970	Hbs1l	100	71.489	Mus_spretus
ENSCVAG00000001462	hbs1l	100	71.671	ENSMPUG00000014810	HBS1L	100	71.449	Mustela_putorius_furo
ENSCVAG00000001462	hbs1l	100	71.246	ENSMLUG00000010618	HBS1L	100	71.186	Myotis_lucifugus
ENSCVAG00000001462	hbs1l	100	70.680	ENSNGAG00000015184	Hbs1l	100	70.904	Nannospalax_galili
ENSCVAG00000001462	hbs1l	100	85.633	ENSNBRG00000020095	hbs1l	99	87.896	Neolamprologus_brichardi
ENSCVAG00000001462	hbs1l	100	70.638	ENSNLEG00000014721	HBS1L	96	89.130	Nomascus_leucogenys
ENSCVAG00000001462	hbs1l	82	81.726	ENSMEUG00000003907	HBS1L	81	81.726	Notamacropus_eugenii
ENSCVAG00000001462	hbs1l	74	80.165	ENSOPRG00000013595	HBS1L	70	82.609	Ochotona_princeps
ENSCVAG00000001462	hbs1l	99	71.083	ENSODEG00000008959	HBS1L	100	70.580	Octodon_degus
ENSCVAG00000001462	hbs1l	100	85.775	ENSONIG00000000460	hbs1l	100	85.290	Oreochromis_niloticus
ENSCVAG00000001462	hbs1l	99	69.787	ENSOANG00000002684	-	99	69.688	Ornithorhynchus_anatinus
ENSCVAG00000001462	hbs1l	100	67.898	ENSOCUG00000011619	HBS1L	99	69.404	Oryctolagus_cuniculus
ENSCVAG00000001462	hbs1l	100	81.054	ENSORLG00000016559	hbs1l	100	81.054	Oryzias_latipes
ENSCVAG00000001462	hbs1l	100	80.912	ENSORLG00020003827	hbs1l	100	80.912	Oryzias_latipes_hni
ENSCVAG00000001462	hbs1l	100	80.912	ENSORLG00015023105	hbs1l	100	80.912	Oryzias_latipes_hsok
ENSCVAG00000001462	hbs1l	100	81.339	ENSOMEG00000016715	hbs1l	100	81.339	Oryzias_melastigma
ENSCVAG00000001462	hbs1l	100	71.773	ENSOGAG00000012604	HBS1L	100	71.773	Otolemur_garnettii
ENSCVAG00000001462	hbs1l	100	71.955	ENSOARG00000005671	-	100	71.388	Ovis_aries
ENSCVAG00000001462	hbs1l	99	72.301	ENSOARG00000014798	-	99	71.733	Ovis_aries
ENSCVAG00000001462	hbs1l	100	71.631	ENSPPAG00000029900	HBS1L	100	71.631	Pan_paniscus
ENSCVAG00000001462	hbs1l	100	71.268	ENSPPRG00000005285	HBS1L	96	89.130	Panthera_pardus
ENSCVAG00000001462	hbs1l	100	71.268	ENSPTIG00000015803	HBS1L	96	89.130	Panthera_tigris_altaica
ENSCVAG00000001462	hbs1l	100	71.631	ENSPTRG00000018630	HBS1L	100	71.631	Pan_troglodytes
ENSCVAG00000001462	hbs1l	100	71.489	ENSPANG00000007075	HBS1L	94	89.130	Papio_anubis
ENSCVAG00000001462	hbs1l	95	79.735	ENSPKIG00000023171	hbs1l	97	79.735	Paramormyrops_kingsleyae
ENSCVAG00000001462	hbs1l	86	69.118	ENSPSIG00000016467	HBS1L	97	69.118	Pelodiscus_sinensis
ENSCVAG00000001462	hbs1l	99	79.685	ENSPMGG00000018051	hbs1l	96	88.830	Periophthalmus_magnuspinnatus
ENSCVAG00000001462	hbs1l	100	70.670	ENSPEMG00000014369	Hbs1l	100	70.752	Peromyscus_maniculatus_bairdii
ENSCVAG00000001462	hbs1l	100	63.572	ENSPMAG00000002516	hbs1l	100	63.150	Petromyzon_marinus
ENSCVAG00000001462	hbs1l	100	91.193	ENSPFOG00000021764	hbs1l	100	91.193	Poecilia_formosa
ENSCVAG00000001462	hbs1l	100	91.880	ENSPLAG00000006193	hbs1l	100	91.880	Poecilia_latipinna
ENSCVAG00000001462	hbs1l	100	91.880	ENSPMEG00000000925	hbs1l	100	91.880	Poecilia_mexicana
ENSCVAG00000001462	hbs1l	100	91.311	ENSPREG00000011270	hbs1l	100	91.311	Poecilia_reticulata
ENSCVAG00000001462	hbs1l	100	70.922	ENSPPYG00000017027	HBS1L	100	70.922	Pongo_abelii
ENSCVAG00000001462	hbs1l	76	76.895	ENSPCAG00000007002	HBS1L	79	76.895	Procavia_capensis
ENSCVAG00000001462	hbs1l	84	76.806	ENSPVAG00000015229	HBS1L	85	77.419	Pteropus_vampyrus
ENSCVAG00000001462	hbs1l	100	85.775	ENSPNYG00000013360	hbs1l	100	85.775	Pundamilia_nyererei
ENSCVAG00000001462	hbs1l	100	77.292	ENSPNAG00000026721	hbs1l	100	77.292	Pygocentrus_nattereri
ENSCVAG00000001462	hbs1l	100	71.853	ENSRNOG00000014531	Hbs1l	100	72.073	Rattus_norvegicus
ENSCVAG00000001462	hbs1l	100	71.206	ENSRBIG00000004484	HBS1L	94	89.130	Rhinopithecus_bieti
ENSCVAG00000001462	hbs1l	100	71.064	ENSRROG00000026176	HBS1L	94	86.957	Rhinopithecus_roxellana
ENSCVAG00000001462	hbs1l	61	39.374	YKR084C	-	73	39.374	Saccharomyces_cerevisiae
ENSCVAG00000001462	hbs1l	100	71.388	ENSSBOG00000019696	-	96	89.130	Saimiri_boliviensis_boliviensis
ENSCVAG00000001462	hbs1l	100	63.314	ENSSBOG00000016930	-	98	77.660	Saimiri_boliviensis_boliviensis
ENSCVAG00000001462	hbs1l	100	70.084	ENSSHAG00000013509	HBS1L	100	70.084	Sarcophilus_harrisii
ENSCVAG00000001462	hbs1l	99	73.400	ENSSFOG00015017544	hbs1l	96	73.400	Scleropages_formosus
ENSCVAG00000001462	hbs1l	100	82.788	ENSSMAG00000010621	hbs1l	100	83.073	Scophthalmus_maximus
ENSCVAG00000001462	hbs1l	100	85.633	ENSSDUG00000012974	hbs1l	100	85.633	Seriola_dumerili
ENSCVAG00000001462	hbs1l	100	85.633	ENSSLDG00000004960	hbs1l	100	85.633	Seriola_lalandi_dorsalis
ENSCVAG00000001462	hbs1l	98	69.754	ENSSARG00000006747	HBS1L	100	70.188	Sorex_araneus
ENSCVAG00000001462	hbs1l	99	69.547	ENSSPUG00000012389	HBS1L	99	69.688	Sphenodon_punctatus
ENSCVAG00000001462	hbs1l	97	70.949	ENSSSCG00000004169	HBS1L	100	70.229	Sus_scrofa
ENSCVAG00000001462	hbs1l	99	70.042	ENSTGUG00000011507	HBS1L	99	69.676	Taeniopygia_guttata
ENSCVAG00000001462	hbs1l	99	82.194	ENSTRUG00000016128	hbs1l	89	94.595	Takifugu_rubripes
ENSCVAG00000001462	hbs1l	99	81.883	ENSTNIG00000016320	hbs1l	99	81.740	Tetraodon_nigroviridis
ENSCVAG00000001462	hbs1l	100	65.341	ENSTBEG00000009950	HBS1L	100	65.341	Tupaia_belangeri
ENSCVAG00000001462	hbs1l	99	71.064	ENSTTRG00000003715	HBS1L	99	71.146	Tursiops_truncatus
ENSCVAG00000001462	hbs1l	100	71.972	ENSUAMG00000001064	HBS1L	100	71.748	Ursus_americanus
ENSCVAG00000001462	hbs1l	100	71.831	ENSUMAG00000024395	HBS1L	100	89.189	Ursus_maritimus
ENSCVAG00000001462	hbs1l	88	77.819	ENSVPAG00000006280	HBS1L	86	89.130	Vicugna_pacos
ENSCVAG00000001462	hbs1l	100	71.127	ENSVVUG00000000295	HBS1L	100	70.968	Vulpes_vulpes
ENSCVAG00000001462	hbs1l	100	70.513	ENSXETG00000003726	hbs1l	100	70.513	Xenopus_tropicalis
ENSCVAG00000001462	hbs1l	99	89.444	ENSXCOG00000005323	hbs1l	100	89.444	Xiphophorus_couchianus
ENSCVAG00000001462	hbs1l	100	92.023	ENSXMAG00000004359	hbs1l	100	92.023	Xiphophorus_maculatus