EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001520 (Gene tree)
Gene ID: 107096340
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15667 bases
Position: chrKL653116.1:501275-516941
Accession: 107096340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020260	SRP72	PF08492.12	4.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014812	-	2215	XM_015392950	ENSCVAP00000020260	609 (aa)	XP_015248436	-

Gene Model

Click here to download ENSCVAG00000001520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001520	srp72	99	77.997	ENSG00000174780	SRP72	91	77.997	Homo_sapiens
ENSCVAG00000001520	srp72	99	80.033	ENSAPOG00000019438	srp72	90	80.033	Acanthochromis_polyacanthus
ENSCVAG00000001520	srp72	99	78.369	ENSAMEG00000008469	SRP72	91	77.997	Ailuropoda_melanoleuca
ENSCVAG00000001520	srp72	100	92.471	ENSACIG00000000488	srp72	91	92.471	Amphilophus_citrinellus
ENSCVAG00000001520	srp72	100	93.596	ENSAOCG00000011256	srp72	91	93.596	Amphiprion_ocellaris
ENSCVAG00000001520	srp72	100	93.268	ENSAPEG00000001512	srp72	91	93.268	Amphiprion_percula
ENSCVAG00000001520	srp72	100	92.939	ENSATEG00000006781	srp72	99	92.939	Anabas_testudineus
ENSCVAG00000001520	srp72	99	77.280	ENSAPLG00000008751	SRP72	90	77.280	Anas_platyrhynchos
ENSCVAG00000001520	srp72	99	77.318	ENSACAG00000002381	SRP72	90	76.847	Anolis_carolinensis
ENSCVAG00000001520	srp72	99	77.504	ENSANAG00000020836	-	91	77.504	Aotus_nancymaae
ENSCVAG00000001520	srp72	100	92.939	ENSACLG00000014617	srp72	91	92.939	Astatotilapia_calliptera
ENSCVAG00000001520	srp72	100	83.607	ENSAMXG00000004011	srp72	92	83.607	Astyanax_mexicanus
ENSCVAG00000001520	srp72	99	77.340	ENSBTAG00000010593	SRP72	91	77.340	Bos_taurus
ENSCVAG00000001520	srp72	99	77.176	ENSCJAG00000017998	SRP72	91	77.176	Callithrix_jacchus
ENSCVAG00000001520	srp72	99	78.161	ENSCAFG00000002244	SRP72	91	78.161	Canis_familiaris
ENSCVAG00000001520	srp72	99	78.161	ENSCAFG00020027338	SRP72	89	79.048	Canis_lupus_dingo
ENSCVAG00000001520	srp72	99	75.738	ENSCHIG00000021465	SRP72	91	75.738	Capra_hircus
ENSCVAG00000001520	srp72	99	78.182	ENSTSYG00000010571	-	92	77.221	Carlito_syrichta
ENSCVAG00000001520	srp72	87	57.386	ENSCAPG00000016668	SRP72	87	57.386	Cavia_aperea
ENSCVAG00000001520	srp72	99	77.997	ENSCPOG00000000218	SRP72	91	77.997	Cavia_porcellus
ENSCVAG00000001520	srp72	99	77.467	ENSCCAG00000030683	-	91	77.467	Cebus_capucinus
ENSCVAG00000001520	srp72	99	75.537	ENSCCAG00000030830	-	91	75.369	Cebus_capucinus
ENSCVAG00000001520	srp72	99	77.833	ENSCATG00000008072	SRP72	91	77.833	Cercocebus_atys
ENSCVAG00000001520	srp72	99	61.716	ENSCATG00000045359	-	88	61.551	Cercocebus_atys
ENSCVAG00000001520	srp72	99	77.504	ENSCLAG00000003571	SRP72	91	77.504	Chinchilla_lanigera
ENSCVAG00000001520	srp72	99	73.443	ENSCSAG00000005079	SRP72	91	73.443	Chlorocebus_sabaeus
ENSCVAG00000001520	srp72	89	76.316	ENSCHOG00000013240	SRP72	80	76.316	Choloepus_hoffmanni
ENSCVAG00000001520	srp72	98	77.667	ENSCPBG00000015015	SRP72	91	77.011	Chrysemys_picta_bellii
ENSCVAG00000001520	srp72	95	42.454	ENSCING00000002417	-	90	42.492	Ciona_intestinalis
ENSCVAG00000001520	srp72	98	42.995	ENSCSAVG00000011288	-	89	43.204	Ciona_savignyi
ENSCVAG00000001520	srp72	99	51.639	ENSCANG00000037920	-	89	53.115	Colobus_angolensis_palliatus
ENSCVAG00000001520	srp72	99	77.833	ENSCANG00000041709	SRP72	91	77.833	Colobus_angolensis_palliatus
ENSCVAG00000001520	srp72	99	77.504	ENSCGRG00001013548	Srp72	91	77.504	Cricetulus_griseus_chok1gshd
ENSCVAG00000001520	srp72	94	77.951	ENSCGRG00000003013	Srp72	90	77.951	Cricetulus_griseus_crigri
ENSCVAG00000001520	srp72	100	91.297	ENSCSEG00000003616	srp72	91	91.297	Cynoglossus_semilaevis
ENSCVAG00000001520	srp72	88	82.959	ENSDARG00000014139	srp72	90	82.959	Danio_rerio
ENSCVAG00000001520	srp72	99	74.141	ENSDNOG00000039012	SRP72	75	74.468	Dasypus_novemcinctus
ENSCVAG00000001520	srp72	99	77.280	ENSDORG00000000171	Srp72	91	77.011	Dipodomys_ordii
ENSCVAG00000001520	srp72	98	41.089	FBgn0038810	Srp72	91	40.722	Drosophila_melanogaster
ENSCVAG00000001520	srp72	99	78.037	ENSETEG00000005191	SRP72	91	77.833	Echinops_telfairi
ENSCVAG00000001520	srp72	74	62.857	ENSEBUG00000003696	srp72	89	62.857	Eptatretus_burgeri
ENSCVAG00000001520	srp72	99	77.833	ENSEASG00005017747	SRP72	91	77.833	Equus_asinus_asinus
ENSCVAG00000001520	srp72	99	77.668	ENSECAG00000006920	SRP72	91	77.668	Equus_caballus
ENSCVAG00000001520	srp72	100	85.246	ENSELUG00000022415	srp72	91	85.246	Esox_lucius
ENSCVAG00000001520	srp72	99	78.017	ENSFCAG00000027600	SRP72	91	77.833	Felis_catus
ENSCVAG00000001520	srp72	98	79.534	ENSFALG00000006713	SRP72	91	79.180	Ficedula_albicollis
ENSCVAG00000001520	srp72	98	51.252	ENSFDAG00000009793	-	87	51.664	Fukomys_damarensis
ENSCVAG00000001520	srp72	99	77.504	ENSFDAG00000002014	-	91	77.504	Fukomys_damarensis
ENSCVAG00000001520	srp72	100	94.745	ENSFHEG00000017652	srp72	84	94.745	Fundulus_heteroclitus
ENSCVAG00000001520	srp72	100	81.506	ENSGMOG00000005986	srp72	91	81.506	Gadus_morhua
ENSCVAG00000001520	srp72	98	78.833	ENSGALG00000011403	SRP72	91	78.161	Gallus_gallus
ENSCVAG00000001520	srp72	100	95.402	ENSGAFG00000017762	srp72	91	95.402	Gambusia_affinis
ENSCVAG00000001520	srp72	100	89.672	ENSGACG00000016749	srp72	91	89.672	Gasterosteus_aculeatus
ENSCVAG00000001520	srp72	88	78.652	ENSGAGG00000024611	SRP72	89	78.652	Gopherus_agassizii
ENSCVAG00000001520	srp72	99	77.668	ENSGGOG00000013234	-	91	77.668	Gorilla_gorilla
ENSCVAG00000001520	srp72	100	93.103	ENSHBUG00000020723	srp72	91	93.103	Haplochromis_burtoni
ENSCVAG00000001520	srp72	90	70.000	ENSHGLG00000010633	-	91	71.212	Heterocephalus_glaber_female
ENSCVAG00000001520	srp72	99	72.906	ENSHGLG00000005029	-	91	72.578	Heterocephalus_glaber_female
ENSCVAG00000001520	srp72	99	77.833	ENSHGLG00000009791	SRP72	91	77.833	Heterocephalus_glaber_female
ENSCVAG00000001520	srp72	99	59.174	ENSHGLG00000018597	-	89	59.504	Heterocephalus_glaber_female
ENSCVAG00000001520	srp72	87	70.222	ENSHGLG00000003950	-	89	70.222	Heterocephalus_glaber_female
ENSCVAG00000001520	srp72	99	77.833	ENSHGLG00100009021	SRP72	91	77.833	Heterocephalus_glaber_male
ENSCVAG00000001520	srp72	87	69.778	ENSHGLG00100017133	-	89	69.778	Heterocephalus_glaber_male
ENSCVAG00000001520	srp72	99	72.906	ENSHGLG00100011236	-	91	72.578	Heterocephalus_glaber_male
ENSCVAG00000001520	srp72	99	59.606	ENSHGLG00100009346	-	91	59.278	Heterocephalus_glaber_male
ENSCVAG00000001520	srp72	100	90.312	ENSHCOG00000013760	srp72	92	90.312	Hippocampus_comes
ENSCVAG00000001520	srp72	100	83.443	ENSIPUG00000000210	srp72	92	83.443	Ictalurus_punctatus
ENSCVAG00000001520	srp72	99	77.997	ENSSTOG00000007305	SRP72	91	77.997	Ictidomys_tridecemlineatus
ENSCVAG00000001520	srp72	99	77.205	ENSJJAG00000018324	Srp72	90	78.994	Jaculus_jaculus
ENSCVAG00000001520	srp72	100	91.297	ENSKMAG00000003776	srp72	91	91.297	Kryptolebias_marmoratus
ENSCVAG00000001520	srp72	100	84.098	ENSLOCG00000002628	srp72	91	84.098	Lepisosteus_oculatus
ENSCVAG00000001520	srp72	99	77.668	ENSLAFG00000018307	SRP72	91	77.668	Loxodonta_africana
ENSCVAG00000001520	srp72	99	77.833	ENSMFAG00000031065	SRP72	91	77.833	Macaca_fascicularis
ENSCVAG00000001520	srp72	99	62.706	ENSMFAG00000037164	-	90	63.036	Macaca_fascicularis
ENSCVAG00000001520	srp72	96	55.746	ENSMMUG00000021262	-	87	55.403	Macaca_mulatta
ENSCVAG00000001520	srp72	99	77.833	ENSMMUG00000016368	SRP72	91	77.833	Macaca_mulatta
ENSCVAG00000001520	srp72	99	77.833	ENSMNEG00000038065	-	91	77.833	Macaca_nemestrina
ENSCVAG00000001520	srp72	99	76.355	ENSMLEG00000030140	-	90	75.698	Mandrillus_leucophaeus
ENSCVAG00000001520	srp72	100	93.432	ENSMAMG00000014989	srp72	81	93.432	Mastacembelus_armatus
ENSCVAG00000001520	srp72	100	93.103	ENSMZEG00005003325	srp72	91	93.103	Maylandia_zebra
ENSCVAG00000001520	srp72	95	74.177	ENSMGAG00000008567	SRP72	88	77.561	Meleagris_gallopavo
ENSCVAG00000001520	srp72	99	77.537	ENSMAUG00000001237	Srp72	91	77.176	Mesocricetus_auratus
ENSCVAG00000001520	srp72	99	77.011	ENSMICG00000008507	-	90	77.011	Microcebus_murinus
ENSCVAG00000001520	srp72	99	77.176	ENSMOCG00000020309	Srp72	91	77.176	Microtus_ochrogaster
ENSCVAG00000001520	srp72	100	90.148	ENSMMOG00000002627	srp72	91	90.148	Mola_mola
ENSCVAG00000001520	srp72	98	74.500	ENSMODG00000020697	SRP72	91	74.056	Monodelphis_domestica
ENSCVAG00000001520	srp72	100	90.805	ENSMALG00000003747	srp72	91	90.805	Monopterus_albus
ENSCVAG00000001520	srp72	99	77.340	MGP_CAROLIEiJ_G0027323	Srp72	91	77.340	Mus_caroli
ENSCVAG00000001520	srp72	99	77.340	ENSMUSG00000036323	Srp72	91	77.340	Mus_musculus
ENSCVAG00000001520	srp72	99	77.851	MGP_PahariEiJ_G0017103	Srp72	90	77.668	Mus_pahari
ENSCVAG00000001520	srp72	99	77.340	MGP_SPRETEiJ_G0028317	Srp72	91	77.340	Mus_spretus
ENSCVAG00000001520	srp72	99	78.369	ENSMPUG00000004828	SRP72	91	77.997	Mustela_putorius_furo
ENSCVAG00000001520	srp72	99	77.575	ENSMLUG00000007344	SRP72	90	77.213	Myotis_lucifugus
ENSCVAG00000001520	srp72	100	77.488	ENSNGAG00000012595	Srp72	90	79.706	Nannospalax_galili
ENSCVAG00000001520	srp72	100	88.998	ENSNBRG00000014492	srp72	91	88.506	Neolamprologus_brichardi
ENSCVAG00000001520	srp72	99	72.414	ENSNLEG00000008806	-	90	72.414	Nomascus_leucogenys
ENSCVAG00000001520	srp72	98	66.833	ENSMEUG00000005164	SRP72	81	82.692	Notamacropus_eugenii
ENSCVAG00000001520	srp72	99	76.705	ENSOPRG00000012521	SRP72	91	76.519	Ochotona_princeps
ENSCVAG00000001520	srp72	99	75.541	ENSODEG00000012214	SRP72	91	75.205	Octodon_degus
ENSCVAG00000001520	srp72	100	92.775	ENSONIG00000001446	srp72	91	92.775	Oreochromis_niloticus
ENSCVAG00000001520	srp72	99	62.052	ENSOANG00000008562	SRP72	90	62.175	Ornithorhynchus_anatinus
ENSCVAG00000001520	srp72	99	77.997	ENSOCUG00000012226	SRP72	91	77.997	Oryctolagus_cuniculus
ENSCVAG00000001520	srp72	100	89.819	ENSORLG00000020418	srp72	91	89.819	Oryzias_latipes
ENSCVAG00000001520	srp72	100	89.819	ENSORLG00020009138	srp72	89	89.819	Oryzias_latipes_hni
ENSCVAG00000001520	srp72	100	90.148	ENSORLG00015018251	srp72	91	90.148	Oryzias_latipes_hsok
ENSCVAG00000001520	srp72	100	89.984	ENSOMEG00000022008	srp72	91	89.984	Oryzias_melastigma
ENSCVAG00000001520	srp72	99	77.833	ENSOGAG00000003578	SRP72	91	77.833	Otolemur_garnettii
ENSCVAG00000001520	srp72	99	77.176	ENSOARG00000004329	SRP72	91	77.176	Ovis_aries
ENSCVAG00000001520	srp72	99	55.065	ENSPPAG00000011428	-	87	55.229	Pan_paniscus
ENSCVAG00000001520	srp72	99	77.997	ENSPPAG00000042265	SRP72	91	77.997	Pan_paniscus
ENSCVAG00000001520	srp72	86	62.167	ENSPPAG00000032490	-	89	62.075	Pan_paniscus
ENSCVAG00000001520	srp72	99	78.203	ENSPPRG00000015991	SRP72	91	77.833	Panthera_pardus
ENSCVAG00000001520	srp72	99	78.203	ENSPTIG00000018786	SRP72	91	77.833	Panthera_tigris_altaica
ENSCVAG00000001520	srp72	99	77.997	ENSPTRG00000048466	-	91	77.997	Pan_troglodytes
ENSCVAG00000001520	srp72	99	56.979	ENSPTRG00000048100	-	88	57.143	Pan_troglodytes
ENSCVAG00000001520	srp72	86	61.977	ENSPTRG00000043609	-	88	61.698	Pan_troglodytes
ENSCVAG00000001520	srp72	96	61.945	ENSPANG00000030230	-	90	62.287	Papio_anubis
ENSCVAG00000001520	srp72	99	77.833	ENSPANG00000005495	SRP72	91	77.833	Papio_anubis
ENSCVAG00000001520	srp72	96	77.873	ENSPSIG00000003003	SRP72	91	77.873	Pelodiscus_sinensis
ENSCVAG00000001520	srp72	99	77.371	ENSPEMG00000012828	-	89	78.529	Peromyscus_maniculatus_bairdii
ENSCVAG00000001520	srp72	99	77.649	ENSPCIG00000000732	SRP72	90	77.340	Phascolarctos_cinereus
ENSCVAG00000001520	srp72	100	95.895	ENSPFOG00000003480	srp72	91	95.895	Poecilia_formosa
ENSCVAG00000001520	srp72	100	95.895	ENSPLAG00000020122	srp72	91	95.895	Poecilia_latipinna
ENSCVAG00000001520	srp72	100	95.731	ENSPMEG00000019988	srp72	91	95.731	Poecilia_mexicana
ENSCVAG00000001520	srp72	100	95.238	ENSPREG00000006218	srp72	91	95.238	Poecilia_reticulata
ENSCVAG00000001520	srp72	100	77.814	ENSPPYG00000014752	-	71	77.814	Pongo_abelii
ENSCVAG00000001520	srp72	55	64.412	ENSPPYG00000009152	-	85	64.412	Pongo_abelii
ENSCVAG00000001520	srp72	99	76.190	ENSPVAG00000005590	SRP72	91	76.190	Pteropus_vampyrus
ENSCVAG00000001520	srp72	100	92.939	ENSPNYG00000001916	srp72	91	92.939	Pundamilia_nyererei
ENSCVAG00000001520	srp72	100	84.590	ENSPNAG00000022424	srp72	92	84.590	Pygocentrus_nattereri
ENSCVAG00000001520	srp72	99	75.205	ENSRNOG00000002100	LOC108348180	91	75.862	Rattus_norvegicus
ENSCVAG00000001520	srp72	99	72.368	ENSRBIG00000042069	SRP72	90	72.368	Rhinopithecus_bieti
ENSCVAG00000001520	srp72	99	59.802	ENSRBIG00000029328	-	98	59.794	Rhinopithecus_bieti
ENSCVAG00000001520	srp72	99	77.833	ENSRROG00000035704	SRP72	91	77.833	Rhinopithecus_roxellana
ENSCVAG00000001520	srp72	95	78.201	ENSSHAG00000000614	SRP72	91	74.878	Sarcophilus_harrisii
ENSCVAG00000001520	srp72	100	83.443	ENSSFOG00015002026	srp72	92	83.443	Scleropages_formosus
ENSCVAG00000001520	srp72	100	91.790	ENSSMAG00000007639	srp72	91	91.790	Scophthalmus_maximus
ENSCVAG00000001520	srp72	100	93.924	ENSSDUG00000007345	srp72	89	93.924	Seriola_dumerili
ENSCVAG00000001520	srp72	100	94.089	ENSSLDG00000021819	srp72	91	92.574	Seriola_lalandi_dorsalis
ENSCVAG00000001520	srp72	74	76.923	ENSSARG00000005804	SRP72	67	76.923	Sorex_araneus
ENSCVAG00000001520	srp72	98	77.833	ENSSPUG00000009740	SRP72	90	77.833	Sphenodon_punctatus
ENSCVAG00000001520	srp72	100	94.253	ENSSPAG00000011565	srp72	91	94.253	Stegastes_partitus
ENSCVAG00000001520	srp72	99	75.207	ENSSSCG00000008900	SRP72	90	75.041	Sus_scrofa
ENSCVAG00000001520	srp72	98	79.070	ENSTGUG00000004767	SRP72	91	78.560	Taeniopygia_guttata
ENSCVAG00000001520	srp72	100	88.506	ENSTRUG00000009831	srp72	91	88.506	Takifugu_rubripes
ENSCVAG00000001520	srp72	100	89.327	ENSTNIG00000013073	srp72	91	89.327	Tetraodon_nigroviridis
ENSCVAG00000001520	srp72	89	65.789	ENSTBEG00000007394	SRP72	81	65.789	Tupaia_belangeri
ENSCVAG00000001520	srp72	94	77.431	ENSTTRG00000010945	SRP72	91	77.431	Tursiops_truncatus
ENSCVAG00000001520	srp72	56	79.941	ENSUAMG00000001701	SRP72	85	79.941	Ursus_americanus
ENSCVAG00000001520	srp72	99	78.203	ENSUMAG00000008151	SRP72	91	77.833	Ursus_maritimus
ENSCVAG00000001520	srp72	99	76.519	ENSVPAG00000000458	SRP72	91	76.519	Vicugna_pacos
ENSCVAG00000001520	srp72	99	77.997	ENSVVUG00000006020	SRP72	91	77.997	Vulpes_vulpes
ENSCVAG00000001520	srp72	95	74.177	ENSXETG00000010205	srp72	91	74.177	Xenopus_tropicalis
ENSCVAG00000001520	srp72	100	95.402	ENSXMAG00000018000	srp72	91	95.066	Xiphophorus_maculatus