EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001533 (Gene tree)
Gene ID: 107093201
Gene Symbol: -
Alias: -
Full Name: DNA polymerase III PolC-type-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6482 bases
Position: chrKL652913.1:422087-428568
Accession: 107093201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000615	RNase_T	PF00929.24	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014799	-	1664	XM_015388086	ENSCVAP00000000615	196 (aa)	XP_015243572	UPI000742A9FA

Gene Model

Click here to download ENSCVAG00000001533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001533	-	94	37.054	ENSAOCG00000011593	si:ch1073-296i8.2	79	37.054	Amphiprion_ocellaris
ENSCVAG00000001533	-	94	36.444	ENSAPEG00000012492	si:ch1073-296i8.2	79	36.444	Amphiprion_percula
ENSCVAG00000001533	-	94	43.085	ENSATEG00000021547	si:ch1073-296i8.2	72	43.085	Anabas_testudineus
ENSCVAG00000001533	-	95	67.914	ENSATEG00000021542	si:ch1073-385f13.3	96	67.914	Anabas_testudineus
ENSCVAG00000001533	-	96	61.140	ENSACLG00000023991	-	59	61.140	Astatotilapia_calliptera
ENSCVAG00000001533	-	97	45.876	ENSDARG00000092584	si:ch1073-385f13.3	79	45.876	Danio_rerio
ENSCVAG00000001533	-	93	45.946	ENSDARG00000093773	si:ch1073-296i8.2	78	45.946	Danio_rerio
ENSCVAG00000001533	-	97	68.947	ENSFHEG00000018181	-	96	68.947	Fundulus_heteroclitus
ENSCVAG00000001533	-	94	43.617	ENSFHEG00000018188	si:ch1073-296i8.2	74	43.617	Fundulus_heteroclitus
ENSCVAG00000001533	-	89	46.591	ENSGMOG00000019335	si:ch1073-296i8.2	98	46.591	Gadus_morhua
ENSCVAG00000001533	-	94	54.348	ENSGMOG00000019565	-	97	54.348	Gadus_morhua
ENSCVAG00000001533	-	89	43.017	ENSGACG00000007185	si:ch1073-296i8.2	97	43.017	Gasterosteus_aculeatus
ENSCVAG00000001533	-	97	68.586	ENSHBUG00000007541	si:ch1073-385f13.3	97	68.586	Haplochromis_burtoni
ENSCVAG00000001533	-	95	43.386	ENSHCOG00000008574	si:ch1073-296i8.2	79	43.386	Hippocampus_comes
ENSCVAG00000001533	-	100	69.898	ENSKMAG00000015669	-	99	69.898	Kryptolebias_marmoratus
ENSCVAG00000001533	-	94	44.149	ENSKMAG00000015660	si:ch1073-296i8.2	83	44.149	Kryptolebias_marmoratus
ENSCVAG00000001533	-	88	46.023	ENSLBEG00000019623	si:ch1073-296i8.2	69	46.023	Labrus_bergylta
ENSCVAG00000001533	-	94	54.301	ENSLOCG00000014933	-	93	54.301	Lepisosteus_oculatus
ENSCVAG00000001533	-	94	64.865	ENSMAMG00000023075	si:ch1073-385f13.3	95	64.865	Mastacembelus_armatus
ENSCVAG00000001533	-	72	39.860	ENSMMOG00000018979	si:ch1073-296i8.2	67	39.860	Mola_mola
ENSCVAG00000001533	-	99	64.433	ENSMALG00000015952	si:ch1073-385f13.3	99	64.433	Monopterus_albus
ENSCVAG00000001533	-	97	68.586	ENSONIG00000012794	si:ch1073-385f13.3	97	68.586	Oreochromis_niloticus
ENSCVAG00000001533	-	98	65.803	ENSORLG00000030645	si:ch1073-385f13.3	87	65.803	Oryzias_latipes
ENSCVAG00000001533	-	96	41.414	ENSORLG00000023958	si:ch1073-296i8.2	89	41.414	Oryzias_latipes
ENSCVAG00000001533	-	94	41.935	ENSORLG00020021912	si:ch1073-296i8.2	84	41.935	Oryzias_latipes_hni
ENSCVAG00000001533	-	98	65.285	ENSORLG00020021903	-	98	65.285	Oryzias_latipes_hni
ENSCVAG00000001533	-	96	40.404	ENSORLG00015015303	si:ch1073-296i8.2	89	40.404	Oryzias_latipes_hsok
ENSCVAG00000001533	-	92	49.451	ENSPKIG00000023552	-	84	49.451	Paramormyrops_kingsleyae
ENSCVAG00000001533	-	96	65.426	ENSPFOG00000005521	si:ch1073-385f13.3	96	65.426	Poecilia_formosa
ENSCVAG00000001533	-	91	64.607	ENSPFOG00000021742	-	94	64.607	Poecilia_formosa
ENSCVAG00000001533	-	91	65.169	ENSPMEG00000013087	si:ch1073-385f13.3	93	65.169	Poecilia_mexicana
ENSCVAG00000001533	-	96	64.894	ENSPMEG00000013096	si:ch1073-385f13.3	95	64.894	Poecilia_mexicana
ENSCVAG00000001533	-	91	56.585	ENSPREG00000013537	-	78	56.585	Poecilia_reticulata
ENSCVAG00000001533	-	93	49.180	ENSPNAG00000018956	si:ch1073-385f13.3	97	49.180	Pygocentrus_nattereri
ENSCVAG00000001533	-	96	42.105	ENSSMAG00000004874	si:ch1073-296i8.2	73	42.105	Scophthalmus_maximus
ENSCVAG00000001533	-	98	67.358	ENSSLDG00000002379	si:ch1073-385f13.3	98	67.358	Seriola_lalandi_dorsalis
ENSCVAG00000001533	-	94	44.681	ENSSPAG00000012797	si:ch1073-296i8.2	94	44.681	Stegastes_partitus
ENSCVAG00000001533	-	92	45.355	ENSTNIG00000010399	si:ch1073-296i8.2	79	45.355	Tetraodon_nigroviridis
ENSCVAG00000001533	-	97	64.211	ENSXMAG00000021869	si:ch1073-385f13.3	96	64.211	Xiphophorus_maculatus