EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000001545 (Gene tree)
Gene ID: 107105124
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14097 bases
Position: chrKL654576.1:37275-51371
Accession: 107105124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000601	MMR_HSR1	PF01926.23	2e-05	1	1
ENSCVAP00000000611	MMR_HSR1	PF01926.23	5.4e-05	1	1
ENSCVAP00000000602	MMR_HSR1	PF01926.23	5.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014789	-	762	-	ENSCVAP00000000601	253 (aa)	-	-
ENSCVAT00000014782	-	4580	-	ENSCVAP00000000611	402 (aa)	-	-
ENSCVAT00000014790	-	2767	XM_015405238	ENSCVAP00000000602	408 (aa)	XP_015260724	UPI0007425844

Gene Model

Click here to download ENSCVAG00000001545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000001545	arl13b	59	30.872	ENSCVAG00000022959	sar1b	74	30.872
ENSCVAG00000001545	arl13b	57	32.716	ENSCVAG00000016249	ARL6	85	32.716
ENSCVAG00000001545	arl13b	69	33.714	ENSCVAG00000018314	-	92	33.714
ENSCVAG00000001545	arl13b	69	33.714	ENSCVAG00000021619	-	92	33.714
ENSCVAG00000001545	arl13b	71	32.432	ENSCVAG00000004305	arl4aa	89	32.432
ENSCVAG00000001545	arl13b	72	32.240	ENSCVAG00000013760	-	77	33.533
ENSCVAG00000001545	arl13b	70	32.418	ENSCVAG00000020902	arl4cb	91	32.418
ENSCVAG00000001545	arl13b	72	31.183	ENSCVAG00000006500	-	92	31.183
ENSCVAG00000001545	arl13b	68	30.058	ENSCVAG00000007314	-	91	30.058
ENSCVAG00000001545	arl13b	68	32.749	ENSCVAG00000010611	arl3l2	87	32.749
ENSCVAG00000001545	arl13b	68	33.333	ENSCVAG00000013374	-	90	33.333
ENSCVAG00000001545	arl13b	69	32.184	ENSCVAG00000011381	-	92	32.184
ENSCVAG00000001545	arl13b	71	31.720	ENSCVAG00000023139	-	92	31.720
ENSCVAG00000001545	arl13b	67	33.728	ENSCVAG00000021960	arl3	90	32.948
ENSCVAG00000001545	arl13b	66	30.539	ENSCVAG00000020833	ARL5A	88	30.539
ENSCVAG00000001545	arl13b	50	41.270	ENSCVAG00000013902	-	78	41.270
ENSCVAG00000001545	arl13b	70	32.222	ENSCVAG00000015183	ARL6	92	32.222
ENSCVAG00000001545	arl13b	66	34.132	ENSCVAG00000005239	ARL8B	95	34.132
ENSCVAG00000001545	arl13b	63	36.527	ENSCVAG00000019595	arl11	94	36.527
ENSCVAG00000001545	arl13b	71	38.333	ENSCVAG00000008445	arl2	93	38.333
ENSCVAG00000001545	arl13b	75	32.292	ENSCVAG00000020378	arl8ba	97	32.292
ENSCVAG00000001545	arl13b	67	32.164	ENSCVAG00000001731	arl1	88	32.164
ENSCVAG00000001545	arl13b	91	47.210	ENSCVAG00000005783	arl13a	54	48.848
ENSCVAG00000001545	arl13b	72	31.868	ENSCVAG00000000745	arf2b	96	31.868
ENSCVAG00000001545	arl13b	68	30.058	ENSCVAG00000009124	ARF5	91	30.058
ENSCVAG00000001545	arl13b	74	33.155	ENSCVAG00000016797	-	97	33.155
ENSCVAG00000001545	arl13b	66	33.533	ENSCVAG00000001271	arf3b	87	33.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001545	arl13b	99	82.482	ENSAPOG00000013256	arl13b	99	83.698	Acanthochromis_polyacanthus
ENSCVAG00000001545	arl13b	100	83.333	ENSACIG00000017582	arl13b	90	94.470	Amphilophus_citrinellus
ENSCVAG00000001545	arl13b	99	82.238	ENSAOCG00000002828	arl13b	99	83.455	Amphiprion_ocellaris
ENSCVAG00000001545	arl13b	86	94.009	ENSAPEG00000014654	arl13b	99	83.463	Amphiprion_percula
ENSCVAG00000001545	arl13b	99	80.685	ENSATEG00000017586	arl13b	99	81.039	Anabas_testudineus
ENSCVAG00000001545	arl13b	87	79.091	ENSACAG00000000523	ARL13B	99	59.856	Anolis_carolinensis
ENSCVAG00000001545	arl13b	86	94.009	ENSACLG00000024227	arl13b	86	93.069	Astatotilapia_calliptera
ENSCVAG00000001545	arl13b	89	89.381	ENSAMXG00000042824	arl13b	100	71.913	Astyanax_mexicanus
ENSCVAG00000001545	arl13b	80	79.310	ENSCAPG00000006764	ARL13B	76	78.788	Cavia_aperea
ENSCVAG00000001545	arl13b	87	74.429	ENSCPOG00000002558	ARL13B	56	73.832	Cavia_porcellus
ENSCVAG00000001545	arl13b	83	79.048	ENSCLAG00000006379	ARL13B	100	58.072	Chinchilla_lanigera
ENSCVAG00000001545	arl13b	88	79.372	ENSCPBG00000005599	ARL13B	100	61.894	Chrysemys_picta_bellii
ENSCVAG00000001545	arl13b	91	94.323	ENSCSEG00000005258	arl13b	99	76.329	Cynoglossus_semilaevis
ENSCVAG00000001545	arl13b	86	89.401	ENSDARG00000012763	arl13b	100	74.634	Danio_rerio
ENSCVAG00000001545	arl13b	96	52.869	ENSEBUG00000006528	arl13b	90	52.045	Eptatretus_burgeri
ENSCVAG00000001545	arl13b	91	79.130	ENSEEUG00000010823	ARL13B	76	70.714	Erinaceus_europaeus
ENSCVAG00000001545	arl13b	85	77.315	ENSFALG00000001654	ARL13B	100	55.802	Ficedula_albicollis
ENSCVAG00000001545	arl13b	89	79.204	ENSFDAG00000006556	ARL13B	100	62.093	Fukomys_damarensis
ENSCVAG00000001545	arl13b	91	96.957	ENSFHEG00000016049	arl13b	99	88.512	Fundulus_heteroclitus
ENSCVAG00000001545	arl13b	81	88.350	ENSGMOG00000018628	arl13b	100	66.324	Gadus_morhua
ENSCVAG00000001545	arl13b	91	98.261	ENSGAFG00000000025	arl13b	99	87.654	Gambusia_affinis
ENSCVAG00000001545	arl13b	91	89.956	ENSGACG00000014228	arl13b	99	77.696	Gasterosteus_aculeatus
ENSCVAG00000001545	arl13b	89	78.761	ENSGAGG00000019336	ARL13B	100	61.201	Gopherus_agassizii
ENSCVAG00000001545	arl13b	100	83.415	ENSHBUG00000020619	arl13b	100	83.415	Haplochromis_burtoni
ENSCVAG00000001545	arl13b	86	93.548	ENSHCOG00000006106	arl13b	99	78.701	Hippocampus_comes
ENSCVAG00000001545	arl13b	99	85.749	ENSKMAG00000001122	arl13b	99	85.995	Kryptolebias_marmoratus
ENSCVAG00000001545	arl13b	88	92.825	ENSLBEG00000014612	arl13b	99	79.024	Labrus_bergylta
ENSCVAG00000001545	arl13b	85	88.318	ENSLOCG00000010465	arl13b	100	68.650	Lepisosteus_oculatus
ENSCVAG00000001545	arl13b	88	94.619	ENSMAMG00000021452	arl13b	99	81.663	Mastacembelus_armatus
ENSCVAG00000001545	arl13b	100	83.171	ENSMZEG00005017827	arl13b	100	83.171	Maylandia_zebra
ENSCVAG00000001545	arl13b	87	93.182	ENSMMOG00000010253	arl13b	99	76.167	Mola_mola
ENSCVAG00000001545	arl13b	95	90.000	ENSMALG00000014655	arl13b	99	70.098	Monopterus_albus
ENSCVAG00000001545	arl13b	87	79.091	MGP_CAROLIEiJ_G0020856	Arl13b	100	61.751	Mus_caroli
ENSCVAG00000001545	arl13b	87	79.091	ENSMUSG00000022911	Arl13b	100	60.930	Mus_musculus
ENSCVAG00000001545	arl13b	87	79.091	MGP_PahariEiJ_G0016561	Arl13b	100	60.880	Mus_pahari
ENSCVAG00000001545	arl13b	87	79.091	MGP_SPRETEiJ_G0021763	Arl13b	65	71.530	Mus_spretus
ENSCVAG00000001545	arl13b	82	79.227	ENSMLUG00000017473	ARL13B	96	61.557	Myotis_lucifugus
ENSCVAG00000001545	arl13b	91	94.323	ENSNBRG00000004078	arl13b	87	94.009	Neolamprologus_brichardi
ENSCVAG00000001545	arl13b	92	75.536	ENSNLEG00000001772	ARL13B	100	60.325	Nomascus_leucogenys
ENSCVAG00000001545	arl13b	83	70.000	ENSMEUG00000008036	-	60	65.041	Notamacropus_eugenii
ENSCVAG00000001545	arl13b	91	79.130	ENSODEG00000011381	ARL13B	100	60.698	Octodon_degus
ENSCVAG00000001545	arl13b	86	94.009	ENSONIG00000001864	arl13b	100	78.261	Oreochromis_niloticus
ENSCVAG00000001545	arl13b	99	82.843	ENSORLG00000006350	arl13b	99	82.843	Oryzias_latipes
ENSCVAG00000001545	arl13b	99	83.578	ENSORLG00020013754	arl13b	99	82.598	Oryzias_latipes_hni
ENSCVAG00000001545	arl13b	99	82.108	ENSORLG00015012586	arl13b	99	82.108	Oryzias_latipes_hsok
ENSCVAG00000001545	arl13b	86	90.783	ENSOMEG00000010187	arl13b	84	90.783	Oryzias_melastigma
ENSCVAG00000001545	arl13b	92	79.399	ENSPSIG00000018115	ARL13B	70	71.777	Pelodiscus_sinensis
ENSCVAG00000001545	arl13b	99	81.174	ENSPMGG00000004584	arl13b	99	81.174	Periophthalmus_magnuspinnatus
ENSCVAG00000001545	arl13b	89	62.389	ENSPCIG00000026984	ARL13B	95	44.737	Phascolarctos_cinereus
ENSCVAG00000001545	arl13b	100	89.951	ENSPFOG00000005379	arl13b	100	89.951	Poecilia_formosa
ENSCVAG00000001545	arl13b	91	97.826	ENSPLAG00000008699	arl13b	99	89.817	Poecilia_latipinna
ENSCVAG00000001545	arl13b	97	89.086	ENSPMEG00000015387	arl13b	99	89.770	Poecilia_mexicana
ENSCVAG00000001545	arl13b	91	98.261	ENSPREG00000006291	arl13b	100	89.242	Poecilia_reticulata
ENSCVAG00000001545	arl13b	95	78.149	ENSPNYG00000022879	arl13b	98	77.635	Pundamilia_nyererei
ENSCVAG00000001545	arl13b	86	90.783	ENSPNAG00000003803	arl13b	100	74.272	Pygocentrus_nattereri
ENSCVAG00000001545	arl13b	85	70.833	ENSSFOG00015023057	arl13b	85	70.833	Scleropages_formosus
ENSCVAG00000001545	arl13b	89	81.333	ENSSFOG00015005491	arl13b	83	82.629	Scleropages_formosus
ENSCVAG00000001545	arl13b	99	76.399	ENSSMAG00000015450	arl13b	99	76.214	Scophthalmus_maximus
ENSCVAG00000001545	arl13b	97	84.143	ENSSDUG00000005560	arl13b	98	84.143	Seriola_dumerili
ENSCVAG00000001545	arl13b	96	84.197	ENSSLDG00000013361	arl13b	99	84.416	Seriola_lalandi_dorsalis
ENSCVAG00000001545	arl13b	89	77.679	ENSSARG00000003872	ARL13B	99	60.606	Sorex_araneus
ENSCVAG00000001545	arl13b	91	80.087	ENSSPUG00000006649	ARL13B	88	79.724	Sphenodon_punctatus
ENSCVAG00000001545	arl13b	97	83.715	ENSSPAG00000016442	arl13b	91	83.715	Stegastes_partitus
ENSCVAG00000001545	arl13b	91	77.922	ENSTGUG00000013493	ARL13B	100	55.738	Taeniopygia_guttata
ENSCVAG00000001545	arl13b	89	68.584	ENSTRUG00000003641	arl13b	74	70.918	Takifugu_rubripes
ENSCVAG00000001545	arl13b	91	72.489	ENSTRUG00000013035	-	84	71.429	Takifugu_rubripes
ENSCVAG00000001545	arl13b	89	76.991	ENSVVUG00000021511	ARL13B	100	56.643	Vulpes_vulpes
ENSCVAG00000001545	arl13b	83	42.180	ENSXETG00000026166	arl13a	50	42.180	Xenopus_tropicalis
ENSCVAG00000001545	arl13b	92	78.632	ENSXETG00000032383	ARL13B	99	73.455	Xenopus_tropicalis
ENSCVAG00000001545	arl13b	91	98.261	ENSXCOG00000016955	arl13b	100	79.512	Xiphophorus_couchianus
ENSCVAG00000001545	arl13b	91	97.826	ENSXMAG00000002089	arl13b	99	89.817	Xiphophorus_maculatus