EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000001560 (Gene tree)
Gene ID
107105121
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
11375 bases
Position
chrKL654573.1:26431-37805
Accession
107105121
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000000624RRM_1PF00076.221.1e-4412
ENSCVAP00000000624RRM_1PF00076.221.1e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000014758-2748XM_015405235ENSCVAP00000000624472 (aa)XP_015260721-
Gene Model
Click here to download ENSCVAG00000001560's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001560's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000001560-6234.314ENSCVAG00000001259u2af2a6736.275
ENSCVAG00000001560-5733.333ENSCVAG00000009184celf3b5232.955
ENSCVAG00000001560-6034.314ENSCVAG00000023307-6534.314
ENSCVAG00000001560-9880.769ENSCVAG00000009386puf60b9082.511
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000001560-9879.536ENSG00000179950PUF609080.795Homo_sapiens
ENSCVAG00000001560-9881.624ENSAPOG00000001713puf60b8982.051Acanthochromis_polyacanthus
ENSCVAG00000001560-9877.590ENSAMEG00000006406PUF608477.590Ailuropoda_melanoleuca
ENSCVAG00000001560-9684.430ENSACIG00000003263-9083.369Amphilophus_citrinellus
ENSCVAG00000001560-9881.410ENSACIG00000021705puf60b9181.838Amphilophus_citrinellus
ENSCVAG00000001560-9691.832ENSAOCG00000015558-9090.672Amphiprion_ocellaris
ENSCVAG00000001560-9881.624ENSAOCG00000005395puf60b9182.051Amphiprion_ocellaris
ENSCVAG00000001560-9380.269ENSAPEG00000011923puf60b8780.717Amphiprion_percula
ENSCVAG00000001560-9284.018ENSAPEG00000001836-9282.073Amphiprion_percula
ENSCVAG00000001560-9882.265ENSATEG00000001730puf60b8982.265Anabas_testudineus
ENSCVAG00000001560-9691.247ENSATEG00000006303-9089.348Anabas_testudineus
ENSCVAG00000001560-9880.421ENSAPLG00000010150PUF609080.421Anas_platyrhynchos
ENSCVAG00000001560-9879.916ENSACAG00000001645PUF608879.916Anolis_carolinensis
ENSCVAG00000001560-9879.536ENSANAG00000018626PUF609179.789Aotus_nancymaae
ENSCVAG00000001560-9881.410ENSACLG00000004462puf60b9082.960Astatotilapia_calliptera
ENSCVAG00000001560-9685.683ENSAMXG00000036570puf60a9083.621Astyanax_mexicanus
ENSCVAG00000001560-9875.311ENSAMXG00000041030puf60b9175.569Astyanax_mexicanus
ENSCVAG00000001560-9879.747ENSBTAG00000037493PUF609080.000Bos_taurus
ENSCVAG00000001560-7158.371WBGene00004389rnp-67256.327Caenorhabditis_elegans
ENSCVAG00000001560-9879.536ENSCJAG00000021485PUF608979.789Callithrix_jacchus
ENSCVAG00000001560-9879.325ENSCAFG00000001400PUF608381.015Canis_familiaris
ENSCVAG00000001560-9879.747ENSCAFG00020018754PUF608980.000Canis_lupus_dingo
ENSCVAG00000001560-9879.747ENSCHIG00000001618PUF607879.747Capra_hircus
ENSCVAG00000001560-9879.747ENSTSYG00000011912PUF609180.000Carlito_syrichta
ENSCVAG00000001560-9874.686ENSCPOG00000014613PUF608574.948Cavia_porcellus
ENSCVAG00000001560-9879.325ENSCCAG00000007744PUF608980.000Cebus_capucinus
ENSCVAG00000001560-9879.536ENSCATG00000035405PUF608979.789Cercocebus_atys
ENSCVAG00000001560-9879.747ENSCLAG00000009154PUF608480.000Chinchilla_lanigera
ENSCVAG00000001560-9879.536ENSCSAG00000008878PUF609179.789Chlorocebus_sabaeus
ENSCVAG00000001560-9880.169ENSCPBG00000005595PUF608980.169Chrysemys_picta_bellii
ENSCVAG00000001560-9549.453ENSCING00000008436-8450.881Ciona_intestinalis
ENSCVAG00000001560-5556.934ENSCING00000002156-7460.440Ciona_intestinalis
ENSCVAG00000001560-9350.113ENSCSAVG00000004765-8950.340Ciona_savignyi
ENSCVAG00000001560-9254.425ENSCSAVG00000001385-9953.448Ciona_savignyi
ENSCVAG00000001560-7778.133ENSCANG00000041843PUF608978.457Colobus_angolensis_palliatus
ENSCVAG00000001560-9879.747ENSCGRG00001017442Puf608480.000Cricetulus_griseus_chok1gshd
ENSCVAG00000001560-9879.747ENSCGRG00000003717Puf608480.000Cricetulus_griseus_crigri
ENSCVAG00000001560-9881.838ENSCSEG00000019887puf60b8381.838Cynoglossus_semilaevis
ENSCVAG00000001560-9183.871ENSCSEG00000014845-8282.430Cynoglossus_semilaevis
ENSCVAG00000001560-9684.130ENSDARG00000032175puf60a9978.962Danio_rerio
ENSCVAG00000001560-9874.844ENSDARG00000001241puf60b7989.950Danio_rerio
ENSCVAG00000001560-9672.103ENSDNOG00000043278PUF608172.377Dasypus_novemcinctus
ENSCVAG00000001560-9879.747ENSDORG00000004585Puf608481.015Dipodomys_ordii
ENSCVAG00000001560-8763.889FBgn0028577hfp9646.449Drosophila_melanogaster
ENSCVAG00000001560-9171.034ENSEBUG00000005470-8071.034Eptatretus_burgeri
ENSCVAG00000001560-9262.451ENSEBUG00000014291puf60b7563.619Eptatretus_burgeri
ENSCVAG00000001560-9879.747ENSEASG00005009695PUF608980.000Equus_asinus_asinus
ENSCVAG00000001560-9879.747ENSECAG00000024681PUF608880.000Equus_caballus
ENSCVAG00000001560-9879.245ENSELUG00000006507puf60b9275.952Esox_lucius
ENSCVAG00000001560-9884.289ENSELUG00000018443-9085.301Esox_lucius
ENSCVAG00000001560-9879.747ENSFCAG00000001045PUF609180.000Felis_catus
ENSCVAG00000001560-9869.831ENSFALG00000001136PUF608970.105Ficedula_albicollis
ENSCVAG00000001560-9879.958ENSFDAG00000017177PUF608480.211Fukomys_damarensis
ENSCVAG00000001560-9695.796ENSFHEG00000021687PUF609794.372Fundulus_heteroclitus
ENSCVAG00000001560-9881.410ENSFHEG00000020046puf60b9083.184Fundulus_heteroclitus
ENSCVAG00000001560-9866.173ENSGMOG00000006392puf60b8966.173Gadus_morhua
ENSCVAG00000001560-6282.550ENSGALG00000039901PUF608282.550Gallus_gallus
ENSCVAG00000001560-9888.720ENSGAFG00000004334-9588.069Gambusia_affinis
ENSCVAG00000001560-9881.197ENSGAFG00000021040puf60b9181.838Gambusia_affinis
ENSCVAG00000001560-9876.458ENSGACG00000001484-9276.242Gasterosteus_aculeatus
ENSCVAG00000001560-9868.803ENSGACG00000004717puf60b8968.803Gasterosteus_aculeatus
ENSCVAG00000001560-9880.169ENSGAGG00000013289PUF608380.169Gopherus_agassizii
ENSCVAG00000001560-9879.536ENSGGOG00000004646PUF608979.789Gorilla_gorilla
ENSCVAG00000001560-9789.827ENSHBUG00000009634-9288.043Haplochromis_burtoni
ENSCVAG00000001560-9881.410ENSHBUG00000015118puf60b9082.960Haplochromis_burtoni
ENSCVAG00000001560-9879.958ENSHGLG00000006111PUF608381.330Heterocephalus_glaber_female
ENSCVAG00000001560-9879.958ENSHGLG00100012362PUF608480.211Heterocephalus_glaber_male
ENSCVAG00000001560-9674.393ENSHCOG00000000378-8571.772Hippocampus_comes
ENSCVAG00000001560-9877.002ENSHCOG00000015541puf60b9179.055Hippocampus_comes
ENSCVAG00000001560-9875.569ENSIPUG00000004660puf60b9076.872Ictalurus_punctatus
ENSCVAG00000001560-9683.696ENSIPUG00000002453puf60a9984.318Ictalurus_punctatus
ENSCVAG00000001560-9879.747ENSSTOG00000025037PUF608480.000Ictidomys_tridecemlineatus
ENSCVAG00000001560-9879.747ENSJJAG00000001076Puf608480.000Jaculus_jaculus
ENSCVAG00000001560-9687.636ENSKMAG00000010106-8887.852Kryptolebias_marmoratus
ENSCVAG00000001560-9881.410ENSKMAG00000016745puf60b9182.051Kryptolebias_marmoratus
ENSCVAG00000001560-9681.046ENSLBEG00000012505puf60b9379.915Labrus_bergylta
ENSCVAG00000001560-7577.198ENSLACG00000005456PUF609977.198Latimeria_chalumnae
ENSCVAG00000001560-9884.188ENSLOCG00000010106puf60b8984.188Lepisosteus_oculatus
ENSCVAG00000001560-9879.114ENSLAFG00000022929PUF608579.368Loxodonta_africana
ENSCVAG00000001560-9879.536ENSMFAG00000043373PUF608979.789Macaca_fascicularis
ENSCVAG00000001560-9879.536ENSMMUG00000013558PUF608979.789Macaca_mulatta
ENSCVAG00000001560-9879.536ENSMNEG00000031099PUF608979.789Macaca_nemestrina
ENSCVAG00000001560-9879.536ENSMLEG00000040009PUF609080.795Mandrillus_leucophaeus
ENSCVAG00000001560-9881.197ENSMAMG00000010394puf60b9179.461Mastacembelus_armatus
ENSCVAG00000001560-9692.105ENSMAMG00000019476-9090.672Mastacembelus_armatus
ENSCVAG00000001560-9790.043ENSMZEG00005019425-8990.043Maylandia_zebra
ENSCVAG00000001560-9881.410ENSMZEG00005018515puf60b9082.960Maylandia_zebra
ENSCVAG00000001560-9880.421ENSMGAG00000013070PUF608980.421Meleagris_gallopavo
ENSCVAG00000001560-6482.222ENSMAUG00000014267-7583.959Mesocricetus_auratus
ENSCVAG00000001560-9267.265ENSMAUG00000018549-8767.634Mesocricetus_auratus
ENSCVAG00000001560-9879.747ENSMICG00000012226PUF609080.000Microcebus_murinus
ENSCVAG00000001560-9879.747ENSMOCG00000018780Puf608480.000Microtus_ochrogaster
ENSCVAG00000001560-9681.798ENSMMOG00000018059-9982.558Mola_mola
ENSCVAG00000001560-9881.838ENSMMOG00000004217puf60b9181.838Mola_mola
ENSCVAG00000001560-9879.114ENSMODG00000009161PUF608481.015Monodelphis_domestica
ENSCVAG00000001560-9690.372ENSMALG00000000200-9088.769Monopterus_albus
ENSCVAG00000001560-9874.518ENSMALG00000006797puf60b8874.145Monopterus_albus
ENSCVAG00000001560-9879.958MGP_CAROLIEiJ_G0019910Puf608480.211Mus_caroli
ENSCVAG00000001560-9879.958ENSMUSG00000002524Puf608480.211Mus_musculus
ENSCVAG00000001560-9879.958MGP_PahariEiJ_G0019920Puf608480.211Mus_pahari
ENSCVAG00000001560-9879.958MGP_SPRETEiJ_G0020812Puf608480.211Mus_spretus
ENSCVAG00000001560-9879.536ENSMPUG00000008137PUF608379.789Mustela_putorius_furo
ENSCVAG00000001560-9878.903ENSMLUG00000000238-8479.158Myotis_lucifugus
ENSCVAG00000001560-9278.027ENSMLUG00000013032-8678.523Myotis_lucifugus
ENSCVAG00000001560-9879.747ENSNGAG00000000712Puf609180.000Nannospalax_galili
ENSCVAG00000001560-7879.839ENSNBRG00000013047puf60b8780.376Neolamprologus_brichardi
ENSCVAG00000001560-9789.805ENSNBRG00000017223-8889.805Neolamprologus_brichardi
ENSCVAG00000001560-9879.536ENSNLEG00000002156PUF608979.789Nomascus_leucogenys
ENSCVAG00000001560-6987.879ENSOPRG00000002147PUF606687.903Ochotona_princeps
ENSCVAG00000001560-9859.827ENSODEG00000015513-8760.043Octodon_degus
ENSCVAG00000001560-6890.625ENSODEG00000014024-7890.625Octodon_degus
ENSCVAG00000001560-9790.260ENSONIG00000014030-8890.260Oreochromis_niloticus
ENSCVAG00000001560-9881.410ENSONIG00000006247puf60b8981.838Oreochromis_niloticus
ENSCVAG00000001560-9564.978ENSOANG00000006962PUF608764.693Ornithorhynchus_anatinus
ENSCVAG00000001560-9590.708ENSORLG00000028655-8890.708Oryzias_latipes
ENSCVAG00000001560-9881.838ENSORLG00000012279puf60b9181.838Oryzias_latipes
ENSCVAG00000001560-9881.838ENSORLG00020007333puf609181.838Oryzias_latipes_hni
ENSCVAG00000001560-9789.394ENSORLG00020018144-8889.394Oryzias_latipes_hni
ENSCVAG00000001560-9882.128ENSORLG00015007718puf60b9182.128Oryzias_latipes_hsok
ENSCVAG00000001560-9690.549ENSORLG00015016833-9590.549Oryzias_latipes_hsok
ENSCVAG00000001560-9791.757ENSOMEG00000022185-9891.540Oryzias_melastigma
ENSCVAG00000001560-9880.128ENSOMEG00000001643puf60b9580.128Oryzias_melastigma
ENSCVAG00000001560-9879.747ENSOGAG00000006259PUF608480.000Otolemur_garnettii
ENSCVAG00000001560-9876.596ENSOARG00000016235PUF608978.390Ovis_aries
ENSCVAG00000001560-9879.536ENSPPAG00000029933PUF608979.789Pan_paniscus
ENSCVAG00000001560-9879.747ENSPPRG00000003257PUF609081.015Panthera_pardus
ENSCVAG00000001560-9380.531ENSPTIG00000009795PUF608680.482Panthera_tigris_altaica
ENSCVAG00000001560-9879.536ENSPTRG00000020670PUF608979.789Pan_troglodytes
ENSCVAG00000001560-9879.536ENSPTRG00000043963-8979.789Pan_troglodytes
ENSCVAG00000001560-9879.536ENSPANG00000021936PUF608979.789Papio_anubis
ENSCVAG00000001560-9885.169ENSPKIG00000004295puf60a9185.381Paramormyrops_kingsleyae
ENSCVAG00000001560-9883.726ENSPKIG00000012204puf60b9183.726Paramormyrops_kingsleyae
ENSCVAG00000001560-9880.042ENSPSIG00000004679PUF608980.421Pelodiscus_sinensis
ENSCVAG00000001560-9880.679ENSPMGG00000013444puf60b9180.679Periophthalmus_magnuspinnatus
ENSCVAG00000001560-9879.747ENSPEMG00000008820Puf608480.000Peromyscus_maniculatus_bairdii
ENSCVAG00000001560-9879.747ENSPCIG00000020270PUF609080.000Phascolarctos_cinereus
ENSCVAG00000001560-9692.511ENSPFOG00000011118-8890.889Poecilia_formosa
ENSCVAG00000001560-9881.197ENSPFOG00000019217puf60b8882.960Poecilia_formosa
ENSCVAG00000001560-9891.126ENSPLAG00000017025-8290.672Poecilia_latipinna
ENSCVAG00000001560-9881.197ENSPLAG00000010754puf60b9082.960Poecilia_latipinna
ENSCVAG00000001560-9692.952ENSPMEG00000009767-8291.323Poecilia_mexicana
ENSCVAG00000001560-9881.197ENSPMEG00000000838puf60b9082.960Poecilia_mexicana
ENSCVAG00000001560-9879.487ENSPREG00000005440puf60b9380.128Poecilia_reticulata
ENSCVAG00000001560-7579.508ENSPPYG00000018951-8678.820Pongo_abelii
ENSCVAG00000001560-7778.400ENSPCAG00000014837PUF608978.723Procavia_capensis
ENSCVAG00000001560-9879.747ENSPCOG00000027981PUF609080.000Propithecus_coquereli
ENSCVAG00000001560-9886.726ENSPVAG00000016167PUF607286.726Pteropus_vampyrus
ENSCVAG00000001560-9881.410ENSPNYG00000002556puf60b9181.838Pundamilia_nyererei
ENSCVAG00000001560-9790.043ENSPNYG00000004273-8990.043Pundamilia_nyererei
ENSCVAG00000001560-9379.287ENSPNAG00000019415puf60b8078.652Pygocentrus_nattereri
ENSCVAG00000001560-9286.395ENSPNAG00000019909puf60a9183.836Pygocentrus_nattereri
ENSCVAG00000001560-9879.958ENSRNOG00000009960Puf608480.211Rattus_norvegicus
ENSCVAG00000001560-9879.536ENSRBIG00000035274PUF608979.789Rhinopithecus_bieti
ENSCVAG00000001560-9879.536ENSRROG00000029360PUF608979.789Rhinopithecus_roxellana
ENSCVAG00000001560-9878.059ENSSBOG00000027089PUF608978.316Saimiri_boliviensis_boliviensis
ENSCVAG00000001560-8778.860ENSSHAG00000006668PUF608079.147Sarcophilus_harrisii
ENSCVAG00000001560-9881.370ENSSFOG00015019619puf60b9480.942Scleropages_formosus
ENSCVAG00000001560-9885.563ENSSFOG00015019371puf60a9485.563Scleropages_formosus
ENSCVAG00000001560-7088.745ENSSMAG00000016381puf60b6788.710Scophthalmus_maximus
ENSCVAG00000001560-9880.128ENSSDUG00000009935puf60b9580.556Seriola_dumerili
ENSCVAG00000001560-9292.273ENSSDUG00000007048-8791.256Seriola_dumerili
ENSCVAG00000001560-9391.837ENSSLDG00000007366-8691.383Seriola_lalandi_dorsalis
ENSCVAG00000001560-9881.838ENSSLDG00000024011puf60b9179.876Seriola_lalandi_dorsalis
ENSCVAG00000001560-5872.183ENSSPUG00000013518PUF607872.183Sphenodon_punctatus
ENSCVAG00000001560-9877.593ENSSPAG00000012144puf60b9179.876Stegastes_partitus
ENSCVAG00000001560-9691.429ENSSPAG00000020285-9291.145Stegastes_partitus
ENSCVAG00000001560-9879.747ENSSSCG00000038800PUF6010076.695Sus_scrofa
ENSCVAG00000001560-9878.814ENSTGUG00000012797-9078.814Taeniopygia_guttata
ENSCVAG00000001560-9882.265ENSTRUG00000005420puf60b9179.876Takifugu_rubripes
ENSCVAG00000001560-9189.510ENSTRUG00000008843-8989.171Takifugu_rubripes
ENSCVAG00000001560-9882.051ENSTNIG00000013675puf60b9082.265Tetraodon_nigroviridis
ENSCVAG00000001560-9686.534ENSTNIG00000003069-8886.313Tetraodon_nigroviridis
ENSCVAG00000001560-8264.183ENSTBEG00000001899-10065.043Tupaia_belangeri
ENSCVAG00000001560-5982.818ENSTBEG00000002751-9782.818Tupaia_belangeri
ENSCVAG00000001560-9878.224ENSTTRG00000017088PUF609179.158Tursiops_truncatus
ENSCVAG00000001560-9879.747ENSUAMG00000024917PUF608980.000Ursus_americanus
ENSCVAG00000001560-9874.473ENSUMAG00000000272PUF608474.526Ursus_maritimus
ENSCVAG00000001560-9879.747ENSVVUG00000022527PUF609180.000Vulpes_vulpes
ENSCVAG00000001560-9680.430ENSXETG00000012469puf608880.531Xenopus_tropicalis
ENSCVAG00000001560-9382.287ENSXCOG00000012355puf60b9082.960Xiphophorus_couchianus
ENSCVAG00000001560-9881.197ENSXMAG00000001862puf60b9181.838Xiphophorus_maculatus
ENSCVAG00000001560-9291.475ENSXMAG00000010507-9088.043Xiphophorus_maculatus

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