EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001680 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1365 bases
Position: chrKL653787.1:67668-69032
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020359	zf-CCCH	PF00642.24	1.1e-32	1	4
ENSCVAP00000020359	zf-CCCH	PF00642.24	1.1e-32	2	4
ENSCVAP00000020359	zf-CCCH	PF00642.24	1.1e-32	3	4
ENSCVAP00000020359	zf-CCCH	PF00642.24	1.1e-32	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014565	-	1365	-	ENSCVAP00000020359	454 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000001680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001680	cth1	58	62.271	ENSAPOG00000012552	cth1	95	61.765	Acanthochromis_polyacanthus
ENSCVAG00000001680	cth1	57	60.949	ENSACIG00000016026	cth1	99	57.143	Amphilophus_citrinellus
ENSCVAG00000001680	cth1	65	61.290	ENSAOCG00000001644	cth1	100	62.058	Amphiprion_ocellaris
ENSCVAG00000001680	cth1	65	61.290	ENSAPEG00000008930	cth1	100	62.058	Amphiprion_percula
ENSCVAG00000001680	cth1	65	61.920	ENSATEG00000002281	cth1	96	60.991	Anabas_testudineus
ENSCVAG00000001680	cth1	58	56.250	ENSACLG00000015353	cth1	95	55.235	Astatotilapia_calliptera
ENSCVAG00000001680	cth1	62	51.613	ENSAMXG00000025717	cth1	92	53.103	Astyanax_mexicanus
ENSCVAG00000001680	cth1	65	59.133	ENSCSEG00000014617	cth1	100	58.385	Cynoglossus_semilaevis
ENSCVAG00000001680	cth1	51	54.615	ENSDARG00000057328	cth1	81	56.757	Danio_rerio
ENSCVAG00000001680	cth1	65	51.471	ENSELUG00000012738	cth1	68	58.798	Esox_lucius
ENSCVAG00000001680	cth1	65	64.331	ENSFHEG00000022665	cth1	100	63.694	Fundulus_heteroclitus
ENSCVAG00000001680	cth1	65	59.105	ENSGMOG00000007360	cth1	100	57.556	Gadus_morhua
ENSCVAG00000001680	cth1	65	65.625	ENSGAFG00000019288	cth1	100	65.000	Gambusia_affinis
ENSCVAG00000001680	cth1	65	61.438	ENSGACG00000000802	cth1	99	60.784	Gasterosteus_aculeatus
ENSCVAG00000001680	cth1	65	56.250	ENSHBUG00000014400	cth1	100	55.340	Haplochromis_burtoni
ENSCVAG00000001680	cth1	65	49.831	ENSHCOG00000010276	cth1	99	50.169	Hippocampus_comes
ENSCVAG00000001680	cth1	61	51.475	ENSIPUG00000018040	cth1	90	51.916	Ictalurus_punctatus
ENSCVAG00000001680	cth1	65	62.706	ENSKMAG00000005944	cth1	100	62.829	Kryptolebias_marmoratus
ENSCVAG00000001680	cth1	65	60.991	ENSLBEG00000019253	cth1	100	62.893	Labrus_bergylta
ENSCVAG00000001680	cth1	65	50.943	ENSMAMG00000001525	cth1	64	58.159	Mastacembelus_armatus
ENSCVAG00000001680	cth1	65	56.579	ENSMZEG00005022335	cth1	100	55.663	Maylandia_zebra
ENSCVAG00000001680	cth1	61	58.224	ENSMMOG00000020518	cth1	100	57.329	Mola_mola
ENSCVAG00000001680	cth1	65	51.579	ENSMALG00000020738	cth1	58	63.303	Monopterus_albus
ENSCVAG00000001680	cth1	59	57.091	ENSNBRG00000022789	cth1	94	57.092	Neolamprologus_brichardi
ENSCVAG00000001680	cth1	65	57.742	ENSONIG00000021318	cth1	99	56.051	Oreochromis_niloticus
ENSCVAG00000001680	cth1	65	55.987	ENSORLG00000022847	cth1	100	55.195	Oryzias_latipes
ENSCVAG00000001680	cth1	65	54.870	ENSORLG00020011979	cth1	100	53.994	Oryzias_latipes_hni
ENSCVAG00000001680	cth1	65	55.882	ENSORLG00015013084	cth1	100	55.410	Oryzias_latipes_hsok
ENSCVAG00000001680	cth1	66	54.754	ENSOMEG00000005809	cth1	85	56.291	Oryzias_melastigma
ENSCVAG00000001680	cth1	62	51.299	ENSPKIG00000015883	cth1	65	56.818	Paramormyrops_kingsleyae
ENSCVAG00000001680	cth1	65	58.333	ENSPMGG00000004275	cth1	100	57.407	Periophthalmus_magnuspinnatus
ENSCVAG00000001680	cth1	65	66.993	ENSPFOG00000013583	cth1	94	66.993	Poecilia_formosa
ENSCVAG00000001680	cth1	65	67.532	ENSPLAG00000018158	cth1	94	67.532	Poecilia_latipinna
ENSCVAG00000001680	cth1	65	66.667	ENSPMEG00000005744	cth1	100	66.667	Poecilia_mexicana
ENSCVAG00000001680	cth1	63	69.435	ENSPREG00000004099	cth1	97	69.024	Poecilia_reticulata
ENSCVAG00000001680	cth1	58	58.555	ENSPNYG00000016705	cth1	84	57.028	Pundamilia_nyererei
ENSCVAG00000001680	cth1	63	52.866	ENSPNAG00000013147	cth1	80	55.426	Pygocentrus_nattereri
ENSCVAG00000001680	cth1	57	53.571	ENSSFOG00015017190	cth1	60	63.636	Scleropages_formosus
ENSCVAG00000001680	cth1	65	60.559	ENSSMAG00000007977	cth1	100	59.938	Scophthalmus_maximus
ENSCVAG00000001680	cth1	65	60.790	ENSSDUG00000004321	cth1	100	60.790	Seriola_dumerili
ENSCVAG00000001680	cth1	65	61.515	ENSSLDG00000004516	-	100	61.631	Seriola_lalandi_dorsalis
ENSCVAG00000001680	cth1	65	61.212	ENSSLDG00000012760	cth1	100	61.329	Seriola_lalandi_dorsalis
ENSCVAG00000001680	cth1	65	62.080	ENSSLDG00000010023	-	99	62.195	Seriola_lalandi_dorsalis
ENSCVAG00000001680	cth1	65	58.228	ENSSPAG00000018659	cth1	100	59.494	Stegastes_partitus
ENSCVAG00000001680	cth1	65	58.621	ENSTRUG00000012770	cth1	100	57.367	Takifugu_rubripes
ENSCVAG00000001680	cth1	65	57.680	ENSTNIG00000000740	cth1	99	57.278	Tetraodon_nigroviridis
ENSCVAG00000001680	cth1	53	62.249	ENSXCOG00000003710	cth1	82	61.111	Xiphophorus_couchianus
ENSCVAG00000001680	cth1	65	66.352	ENSXMAG00000023885	cth1	100	64.151	Xiphophorus_maculatus