EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001727 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 21629 bases
Position: chrKL652528.1:998907-1020535
Accession: 107099771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000772	DRIM	PF07539.12	3.4e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014504	-	8040	XM_015398035	ENSCVAP00000000772	2680 (aa)	XP_015253521	-

Gene Model

Click here to download ENSCVAG00000001727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001727	utp20	99	54.545	ENSG00000120800	UTP20	99	54.084	Homo_sapiens
ENSCVAG00000001727	utp20	100	77.564	ENSAPOG00000002429	utp20	99	77.726	Acanthochromis_polyacanthus
ENSCVAG00000001727	utp20	99	54.286	ENSAMEG00000016416	UTP20	99	53.689	Ailuropoda_melanoleuca
ENSCVAG00000001727	utp20	100	77.132	ENSACIG00000007987	utp20	99	77.096	Amphilophus_citrinellus
ENSCVAG00000001727	utp20	59	78.221	ENSAOCG00000015055	utp20	96	77.858	Amphiprion_ocellaris
ENSCVAG00000001727	utp20	100	78.259	ENSAPEG00000011605	utp20	99	78.152	Amphiprion_percula
ENSCVAG00000001727	utp20	98	79.629	ENSATEG00000005601	utp20	100	79.777	Anabas_testudineus
ENSCVAG00000001727	utp20	99	55.260	ENSAPLG00000015651	UTP20	99	55.619	Anas_platyrhynchos
ENSCVAG00000001727	utp20	99	55.138	ENSACAG00000011671	UTP20	99	55.138	Anolis_carolinensis
ENSCVAG00000001727	utp20	99	53.718	ENSANAG00000027152	UTP20	99	53.575	Aotus_nancymaae
ENSCVAG00000001727	utp20	97	79.406	ENSACLG00000008064	utp20	99	79.406	Astatotilapia_calliptera
ENSCVAG00000001727	utp20	100	63.669	ENSAMXG00000021039	utp20	99	63.907	Astyanax_mexicanus
ENSCVAG00000001727	utp20	99	55.181	ENSBTAG00000003239	UTP20	99	54.491	Bos_taurus
ENSCVAG00000001727	utp20	100	54.688	ENSCJAG00000001913	UTP20	99	54.048	Callithrix_jacchus
ENSCVAG00000001727	utp20	99	54.575	ENSCAFG00000006964	UTP20	99	54.529	Canis_familiaris
ENSCVAG00000001727	utp20	99	54.361	ENSCAFG00020024305	UTP20	99	54.315	Canis_lupus_dingo
ENSCVAG00000001727	utp20	99	54.780	ENSCHIG00000009221	UTP20	99	54.084	Capra_hircus
ENSCVAG00000001727	utp20	99	53.830	ENSTSYG00000003040	UTP20	99	53.906	Carlito_syrichta
ENSCVAG00000001727	utp20	99	51.286	ENSCAPG00000014920	UTP20	99	51.318	Cavia_aperea
ENSCVAG00000001727	utp20	100	53.111	ENSCPOG00000003129	UTP20	99	53.167	Cavia_porcellus
ENSCVAG00000001727	utp20	99	54.620	ENSCCAG00000031422	UTP20	99	54.048	Cebus_capucinus
ENSCVAG00000001727	utp20	99	52.645	ENSCATG00000035636	UTP20	99	52.432	Cercocebus_atys
ENSCVAG00000001727	utp20	100	54.575	ENSCLAG00000011569	UTP20	99	54.076	Chinchilla_lanigera
ENSCVAG00000001727	utp20	99	54.688	ENSCSAG00000003388	UTP20	99	54.261	Chlorocebus_sabaeus
ENSCVAG00000001727	utp20	87	72.727	ENSCHOG00000003532	UTP20	90	72.727	Choloepus_hoffmanni
ENSCVAG00000001727	utp20	95	55.576	ENSCPBG00000004844	UTP20	99	55.915	Chrysemys_picta_bellii
ENSCVAG00000001727	utp20	92	30.642	ENSCSAVG00000008252	-	99	30.642	Ciona_savignyi
ENSCVAG00000001727	utp20	94	55.888	ENSCANG00000034768	UTP20	99	54.323	Colobus_angolensis_palliatus
ENSCVAG00000001727	utp20	99	54.070	ENSCGRG00001017151	Utp20	99	53.644	Cricetulus_griseus_chok1gshd
ENSCVAG00000001727	utp20	99	54.128	ENSCGRG00000008595	Utp20	99	53.701	Cricetulus_griseus_crigri
ENSCVAG00000001727	utp20	98	75.822	ENSCSEG00000014760	utp20	99	75.570	Cynoglossus_semilaevis
ENSCVAG00000001727	utp20	100	63.068	ENSDARG00000099280	utp20	99	63.068	Danio_rerio
ENSCVAG00000001727	utp20	99	53.969	ENSDNOG00000016845	UTP20	99	53.933	Dasypus_novemcinctus
ENSCVAG00000001727	utp20	96	57.669	ENSDORG00000014762	Utp20	99	55.976	Dipodomys_ordii
ENSCVAG00000001727	utp20	89	75.000	ENSETEG00000019983	UTP20	88	75.000	Echinops_telfairi
ENSCVAG00000001727	utp20	99	53.947	ENSEASG00005019981	UTP20	99	53.470	Equus_asinus_asinus
ENSCVAG00000001727	utp20	99	54.088	ENSECAG00000006876	UTP20	99	53.612	Equus_caballus
ENSCVAG00000001727	utp20	69	64.286	ENSEEUG00000003774	UTP20	72	61.765	Erinaceus_europaeus
ENSCVAG00000001727	utp20	100	67.955	ENSELUG00000000798	utp20	99	67.909	Esox_lucius
ENSCVAG00000001727	utp20	99	54.762	ENSFCAG00000006150	UTP20	99	54.300	Felis_catus
ENSCVAG00000001727	utp20	94	54.385	ENSFALG00000011135	UTP20	99	54.385	Ficedula_albicollis
ENSCVAG00000001727	utp20	99	48.949	ENSFDAG00000007567	UTP20	97	70.085	Fukomys_damarensis
ENSCVAG00000001727	utp20	98	82.615	ENSFHEG00000004142	utp20	100	82.846	Fundulus_heteroclitus
ENSCVAG00000001727	utp20	99	63.623	ENSGMOG00000006762	utp20	99	63.636	Gadus_morhua
ENSCVAG00000001727	utp20	99	55.697	ENSGALG00000011643	UTP20	99	55.803	Gallus_gallus
ENSCVAG00000001727	utp20	98	84.228	ENSGAFG00000006986	utp20	100	84.300	Gambusia_affinis
ENSCVAG00000001727	utp20	99	72.966	ENSGACG00000019092	utp20	99	72.730	Gasterosteus_aculeatus
ENSCVAG00000001727	utp20	69	58.196	ENSGAGG00000011169	UTP20	96	57.984	Gopherus_agassizii
ENSCVAG00000001727	utp20	99	54.084	ENSGGOG00000004904	UTP20	99	53.622	Gorilla_gorilla
ENSCVAG00000001727	utp20	100	76.863	ENSHBUG00000010613	utp20	99	76.970	Haplochromis_burtoni
ENSCVAG00000001727	utp20	100	54.342	ENSHGLG00000006422	UTP20	99	54.448	Heterocephalus_glaber_female
ENSCVAG00000001727	utp20	100	53.100	ENSHGLG00100001086	UTP20	99	53.207	Heterocephalus_glaber_male
ENSCVAG00000001727	utp20	100	70.409	ENSHCOG00000005421	utp20	98	74.620	Hippocampus_comes
ENSCVAG00000001727	utp20	100	63.996	ENSIPUG00000013717	utp20	99	64.031	Ictalurus_punctatus
ENSCVAG00000001727	utp20	100	54.894	ENSSTOG00000015995	UTP20	99	54.819	Ictidomys_tridecemlineatus
ENSCVAG00000001727	utp20	99	53.810	ENSJJAG00000019321	Utp20	99	54.239	Jaculus_jaculus
ENSCVAG00000001727	utp20	100	77.995	ENSKMAG00000005972	utp20	99	78.216	Kryptolebias_marmoratus
ENSCVAG00000001727	utp20	98	77.930	ENSLBEG00000000781	utp20	100	78.190	Labrus_bergylta
ENSCVAG00000001727	utp20	78	57.651	ENSLACG00000010098	UTP20	99	57.710	Latimeria_chalumnae
ENSCVAG00000001727	utp20	93	60.510	ENSLOCG00000015197	utp20	94	78.977	Lepisosteus_oculatus
ENSCVAG00000001727	utp20	100	54.012	ENSLAFG00000012983	UTP20	99	53.659	Loxodonta_africana
ENSCVAG00000001727	utp20	99	54.474	ENSMFAG00000037766	UTP20	99	54.084	Macaca_fascicularis
ENSCVAG00000001727	utp20	99	54.545	ENSMMUG00000012891	UTP20	99	54.190	Macaca_mulatta
ENSCVAG00000001727	utp20	99	52.966	ENSMNEG00000037418	UTP20	99	52.789	Macaca_nemestrina
ENSCVAG00000001727	utp20	99	53.052	ENSMLEG00000029148	UTP20	99	52.803	Mandrillus_leucophaeus
ENSCVAG00000001727	utp20	100	76.100	ENSMAMG00000002063	utp20	99	76.182	Mastacembelus_armatus
ENSCVAG00000001727	utp20	100	78.356	ENSMZEG00005018123	utp20	99	78.356	Maylandia_zebra
ENSCVAG00000001727	utp20	99	55.426	ENSMGAG00000011726	UTP20	99	55.634	Meleagris_gallopavo
ENSCVAG00000001727	utp20	63	52.057	ENSMAUG00000011898	Utp20	99	52.164	Mesocricetus_auratus
ENSCVAG00000001727	utp20	99	52.684	ENSMICG00000015736	UTP20	99	52.471	Microcebus_murinus
ENSCVAG00000001727	utp20	99	53.374	ENSMOCG00000015242	Utp20	99	52.910	Microtus_ochrogaster
ENSCVAG00000001727	utp20	99	71.459	ENSMMOG00000003360	utp20	99	70.955	Mola_mola
ENSCVAG00000001727	utp20	99	54.478	ENSMODG00000003141	UTP20	99	54.267	Monodelphis_domestica
ENSCVAG00000001727	utp20	100	76.445	ENSMALG00000002723	utp20	99	76.679	Monopterus_albus
ENSCVAG00000001727	utp20	99	53.833	MGP_CAROLIEiJ_G0015713	Utp20	99	53.552	Mus_caroli
ENSCVAG00000001727	utp20	99	54.291	ENSMUSG00000004356	Utp20	99	54.010	Mus_musculus
ENSCVAG00000001727	utp20	99	54.162	MGP_PahariEiJ_G0031372	Utp20	99	53.674	Mus_pahari
ENSCVAG00000001727	utp20	99	54.201	MGP_SPRETEiJ_G0016531	Utp20	90	73.810	Mus_spretus
ENSCVAG00000001727	utp20	100	54.922	ENSMPUG00000011641	UTP20	99	54.555	Mustela_putorius_furo
ENSCVAG00000001727	utp20	99	54.619	ENSMLUG00000002313	UTP20	99	54.072	Myotis_lucifugus
ENSCVAG00000001727	utp20	99	54.245	ENSNGAG00000013738	Utp20	99	53.835	Nannospalax_galili
ENSCVAG00000001727	utp20	80	91.176	ENSNBRG00000019464	utp20	98	91.176	Neolamprologus_brichardi
ENSCVAG00000001727	utp20	99	54.691	ENSNLEG00000006166	UTP20	99	54.193	Nomascus_leucogenys
ENSCVAG00000001727	utp20	91	85.185	ENSMEUG00000015457	UTP20	86	85.185	Notamacropus_eugenii
ENSCVAG00000001727	utp20	88	77.070	ENSOPRG00000010546	UTP20	86	77.070	Ochotona_princeps
ENSCVAG00000001727	utp20	100	54.219	ENSODEG00000013411	UTP20	99	54.147	Octodon_degus
ENSCVAG00000001727	utp20	100	77.311	ENSONIG00000009910	utp20	99	77.276	Oreochromis_niloticus
ENSCVAG00000001727	utp20	99	54.417	ENSOANG00000005578	UTP20	99	54.094	Ornithorhynchus_anatinus
ENSCVAG00000001727	utp20	99	54.220	ENSOCUG00000010475	UTP20	99	54.081	Oryctolagus_cuniculus
ENSCVAG00000001727	utp20	98	72.799	ENSORLG00000008900	utp20	99	75.913	Oryzias_latipes
ENSCVAG00000001727	utp20	96	75.923	ENSORLG00020005879	utp20	99	75.923	Oryzias_latipes_hni
ENSCVAG00000001727	utp20	96	76.638	ENSORLG00015002843	utp20	99	76.638	Oryzias_latipes_hsok
ENSCVAG00000001727	utp20	98	75.967	ENSOMEG00000023583	utp20	100	76.042	Oryzias_melastigma
ENSCVAG00000001727	utp20	99	54.010	ENSOGAG00000015130	UTP20	99	53.513	Otolemur_garnettii
ENSCVAG00000001727	utp20	99	54.816	ENSOARG00000014722	UTP20	99	54.285	Ovis_aries
ENSCVAG00000001727	utp20	99	54.474	ENSPPAG00000001381	UTP20	99	54.013	Pan_paniscus
ENSCVAG00000001727	utp20	99	54.797	ENSPPRG00000001026	UTP20	99	54.335	Panthera_pardus
ENSCVAG00000001727	utp20	99	54.762	ENSPTIG00000020972	UTP20	99	54.264	Panthera_tigris_altaica
ENSCVAG00000001727	utp20	99	54.510	ENSPTRG00000005349	UTP20	99	54.048	Pan_troglodytes
ENSCVAG00000001727	utp20	99	54.510	ENSPANG00000020388	UTP20	99	54.084	Papio_anubis
ENSCVAG00000001727	utp20	100	62.208	ENSPKIG00000007196	utp20	99	62.026	Paramormyrops_kingsleyae
ENSCVAG00000001727	utp20	94	55.664	ENSPSIG00000016689	UTP20	99	55.547	Pelodiscus_sinensis
ENSCVAG00000001727	utp20	100	72.607	ENSPMGG00000004066	utp20	99	72.607	Periophthalmus_magnuspinnatus
ENSCVAG00000001727	utp20	99	54.749	ENSPEMG00000024120	Utp20	99	54.358	Peromyscus_maniculatus_bairdii
ENSCVAG00000001727	utp20	99	54.321	ENSPCIG00000009298	UTP20	99	54.128	Phascolarctos_cinereus
ENSCVAG00000001727	utp20	92	80.954	ENSPFOG00000003312	utp20	99	81.262	Poecilia_formosa
ENSCVAG00000001727	utp20	98	82.628	ENSPLAG00000012874	utp20	100	82.928	Poecilia_latipinna
ENSCVAG00000001727	utp20	98	80.000	ENSPMEG00000005915	utp20	100	81.702	Poecilia_mexicana
ENSCVAG00000001727	utp20	98	83.321	ENSPREG00000013285	utp20	100	83.283	Poecilia_reticulata
ENSCVAG00000001727	utp20	88	54.143	ENSPPYG00000004871	UTP20	99	53.620	Pongo_abelii
ENSCVAG00000001727	utp20	81	69.474	ENSPCAG00000012791	UTP20	82	69.474	Procavia_capensis
ENSCVAG00000001727	utp20	97	54.504	ENSPCOG00000024948	UTP20	99	53.736	Propithecus_coquereli
ENSCVAG00000001727	utp20	99	53.813	ENSPVAG00000008113	UTP20	99	53.071	Pteropus_vampyrus
ENSCVAG00000001727	utp20	100	76.446	ENSPNYG00000011561	utp20	99	76.500	Pundamilia_nyererei
ENSCVAG00000001727	utp20	100	63.633	ENSPNAG00000006176	utp20	99	63.681	Pygocentrus_nattereri
ENSCVAG00000001727	utp20	99	53.958	ENSRNOG00000005823	Utp20	99	53.565	Rattus_norvegicus
ENSCVAG00000001727	utp20	99	53.362	ENSRBIG00000025384	UTP20	99	53.229	Rhinopithecus_bieti
ENSCVAG00000001727	utp20	99	54.385	ENSRROG00000041254	UTP20	99	54.119	Rhinopithecus_roxellana
ENSCVAG00000001727	utp20	99	54.662	ENSSBOG00000035762	UTP20	99	54.093	Saimiri_boliviensis_boliviensis
ENSCVAG00000001727	utp20	98	53.165	ENSSHAG00000002298	UTP20	99	52.948	Sarcophilus_harrisii
ENSCVAG00000001727	utp20	99	63.756	ENSSFOG00015001674	utp20	99	63.889	Scleropages_formosus
ENSCVAG00000001727	utp20	98	76.866	ENSSMAG00000016460	utp20	100	77.090	Scophthalmus_maximus
ENSCVAG00000001727	utp20	100	78.631	ENSSDUG00000013730	utp20	99	78.507	Seriola_dumerili
ENSCVAG00000001727	utp20	100	78.163	ENSSLDG00000012844	utp20	99	78.041	Seriola_lalandi_dorsalis
ENSCVAG00000001727	utp20	58	88.889	ENSSARG00000002796	-	55	88.889	Sorex_araneus
ENSCVAG00000001727	utp20	99	55.095	ENSSPUG00000004513	UTP20	99	55.103	Sphenodon_punctatus
ENSCVAG00000001727	utp20	100	76.981	ENSSPAG00000014674	utp20	99	76.838	Stegastes_partitus
ENSCVAG00000001727	utp20	99	54.575	ENSSSCG00000000869	UTP20	99	54.079	Sus_scrofa
ENSCVAG00000001727	utp20	76	55.000	ENSTGUG00000009053	-	99	54.630	Taeniopygia_guttata
ENSCVAG00000001727	utp20	99	74.243	ENSTRUG00000005849	utp20	99	74.236	Takifugu_rubripes
ENSCVAG00000001727	utp20	99	72.424	ENSTNIG00000006921	utp20	99	72.601	Tetraodon_nigroviridis
ENSCVAG00000001727	utp20	91	53.101	ENSTBEG00000011917	UTP20	91	53.101	Tupaia_belangeri
ENSCVAG00000001727	utp20	97	54.019	ENSTTRG00000017195	UTP20	98	54.019	Tursiops_truncatus
ENSCVAG00000001727	utp20	99	54.385	ENSUAMG00000016363	UTP20	99	53.800	Ursus_americanus
ENSCVAG00000001727	utp20	99	53.830	ENSUMAG00000000077	UTP20	99	53.234	Ursus_maritimus
ENSCVAG00000001727	utp20	87	56.664	ENSVPAG00000011620	UTP20	92	56.593	Vicugna_pacos
ENSCVAG00000001727	utp20	99	54.432	ENSVVUG00000018110	UTP20	99	54.280	Vulpes_vulpes
ENSCVAG00000001727	utp20	98	54.627	ENSXETG00000032346	UTP20	99	54.750	Xenopus_tropicalis
ENSCVAG00000001727	utp20	98	83.402	ENSXMAG00000006503	utp20	100	83.440	Xiphophorus_maculatus