EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000001863 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6 (1 of many)
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4406 bases
Position: chrKL652658.1:1080906-1085311
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000909	RRM_1	PF00076.22	1.8e-19	1	1
ENSCVAP00000000910	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014294	SRSF6 (1 of many)-202	306	-	ENSCVAP00000000910	101 (aa)	-	-
ENSCVAT00000014293	SRSF6 (1 of many)-201	393	-	ENSCVAP00000000909	130 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000001863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000001863	SRSF6	63	35.385	ENSCVAG00000003556	raly	57	35.385
ENSCVAG00000001863	SRSF6	93	45.669	ENSCVAG00000005458	-	61	45.669
ENSCVAG00000001863	SRSF6	83	43.678	ENSCVAG00000003851	srsf3b	63	45.570
ENSCVAG00000001863	SRSF6	83	41.379	ENSCVAG00000009865	-	52	44.304
ENSCVAG00000001863	SRSF6	93	58.955	ENSCVAG00000016982	srsf5a	98	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001863	SRSF6	95	85.039	ENSG00000124193	SRSF6	58	92.308	Homo_sapiens
ENSCVAG00000001863	SRSF6	97	84.559	ENSAPOG00000016635	-	84	85.185	Acanthochromis_polyacanthus
ENSCVAG00000001863	SRSF6	95	84.553	ENSACIG00000020091	-	95	78.740	Amphilophus_citrinellus
ENSCVAG00000001863	SRSF6	82	95.181	ENSAOCG00000019438	-	73	95.181	Amphiprion_ocellaris
ENSCVAG00000001863	SRSF6	95	85.039	ENSANAG00000024080	SRSF6	58	92.308	Aotus_nancymaae
ENSCVAG00000001863	SRSF6	72	89.041	ENSACLG00000024373	-	80	89.474	Astatotilapia_calliptera
ENSCVAG00000001863	SRSF6	95	83.846	ENSAMXG00000042692	-	97	81.618	Astyanax_mexicanus
ENSCVAG00000001863	SRSF6	95	85.039	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSCVAG00000001863	SRSF6	95	85.039	ENSCJAG00000048403	SRSF6	58	92.308	Callithrix_jacchus
ENSCVAG00000001863	SRSF6	95	85.039	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSCVAG00000001863	SRSF6	95	85.039	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSCVAG00000001863	SRSF6	95	85.039	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSCVAG00000001863	SRSF6	95	85.039	ENSCPOG00000011761	SRSF6	58	92.308	Cavia_porcellus
ENSCVAG00000001863	SRSF6	95	85.039	ENSCCAG00000026018	-	58	92.308	Cebus_capucinus
ENSCVAG00000001863	SRSF6	95	85.039	ENSCATG00000030794	SRSF6	58	92.308	Cercocebus_atys
ENSCVAG00000001863	SRSF6	95	85.039	ENSCLAG00000010247	SRSF6	58	92.308	Chinchilla_lanigera
ENSCVAG00000001863	SRSF6	95	85.039	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSCVAG00000001863	SRSF6	95	90.323	ENSCSEG00000019778	SRSF6	91	86.290	Cynoglossus_semilaevis
ENSCVAG00000001863	SRSF6	95	83.206	ENSDARG00000016783	srsf6b	82	93.590	Danio_rerio
ENSCVAG00000001863	SRSF6	95	85.039	ENSDORG00000028378	Srsf6	58	92.308	Dipodomys_ordii
ENSCVAG00000001863	SRSF6	95	86.719	ENSELUG00000013506	SRSF6	70	92.308	Esox_lucius
ENSCVAG00000001863	SRSF6	95	82.308	ENSELUG00000024182	SRSF6	99	74.815	Esox_lucius
ENSCVAG00000001863	SRSF6	95	82.443	ENSGALG00000000990	SRSF6	58	91.026	Gallus_gallus
ENSCVAG00000001863	SRSF6	100	81.752	ENSGAFG00000019088	-	76	81.752	Gambusia_affinis
ENSCVAG00000001863	SRSF6	95	85.039	ENSGGOG00000009808	SRSF6	58	92.308	Gorilla_gorilla
ENSCVAG00000001863	SRSF6	95	85.039	ENSHGLG00000007348	SRSF6	58	92.308	Heterocephalus_glaber_female
ENSCVAG00000001863	SRSF6	95	85.039	ENSSTOG00000010866	SRSF6	58	92.308	Ictidomys_tridecemlineatus
ENSCVAG00000001863	SRSF6	95	85.039	ENSMFAG00000036925	SRSF6	58	92.308	Macaca_fascicularis
ENSCVAG00000001863	SRSF6	95	85.039	ENSMMUG00000006742	SRSF6	58	92.308	Macaca_mulatta
ENSCVAG00000001863	SRSF6	95	84.252	ENSMNEG00000027392	-	58	91.026	Macaca_nemestrina
ENSCVAG00000001863	SRSF6	81	89.024	ENSMAMG00000023477	-	82	90.789	Mastacembelus_armatus
ENSCVAG00000001863	SRSF6	82	90.361	ENSMAUG00000019086	-	58	92.308	Mesocricetus_auratus
ENSCVAG00000001863	SRSF6	95	85.039	ENSMICG00000008537	SRSF6	58	92.308	Microcebus_murinus
ENSCVAG00000001863	SRSF6	87	96.591	ENSMMOG00000015241	-	82	96.591	Mola_mola
ENSCVAG00000001863	SRSF6	95	85.039	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSCVAG00000001863	SRSF6	95	85.039	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSCVAG00000001863	SRSF6	95	85.039	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSCVAG00000001863	SRSF6	95	85.039	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSCVAG00000001863	SRSF6	95	85.039	ENSNGAG00000017560	Srsf6	58	92.308	Nannospalax_galili
ENSCVAG00000001863	SRSF6	95	85.039	ENSNLEG00000006524	SRSF6	58	92.308	Nomascus_leucogenys
ENSCVAG00000001863	SRSF6	82	90.361	ENSODEG00000016510	-	58	92.308	Octodon_degus
ENSCVAG00000001863	SRSF6	92	89.167	ENSORLG00020017506	srsf6a	74	89.167	Oryzias_latipes_hni
ENSCVAG00000001863	SRSF6	95	85.039	ENSPTRG00000044686	-	58	92.308	Pan_troglodytes
ENSCVAG00000001863	SRSF6	95	85.039	ENSPANG00000035224	SRSF6	58	92.308	Papio_anubis
ENSCVAG00000001863	SRSF6	96	72.000	ENSPKIG00000015703	-	91	69.672	Paramormyrops_kingsleyae
ENSCVAG00000001863	SRSF6	95	91.057	ENSPKIG00000018463	-	77	92.308	Paramormyrops_kingsleyae
ENSCVAG00000001863	SRSF6	99	89.922	ENSPKIG00000015603	-	92	89.922	Paramormyrops_kingsleyae
ENSCVAG00000001863	SRSF6	95	82.812	ENSPCIG00000003820	SRSF6	58	91.026	Phascolarctos_cinereus
ENSCVAG00000001863	SRSF6	95	87.692	ENSPLAG00000009243	srsf6a	80	86.614	Poecilia_latipinna
ENSCVAG00000001863	SRSF6	95	87.023	ENSPREG00000001040	srsf6a	88	87.023	Poecilia_reticulata
ENSCVAG00000001863	SRSF6	95	85.039	ENSPCOG00000026364	SRSF6	58	92.308	Propithecus_coquereli
ENSCVAG00000001863	SRSF6	100	86.923	ENSPNAG00000023179	-	99	85.385	Pygocentrus_nattereri
ENSCVAG00000001863	SRSF6	95	87.805	ENSRBIG00000041414	SRSF6	60	92.308	Rhinopithecus_bieti
ENSCVAG00000001863	SRSF6	95	85.039	ENSRROG00000029989	SRSF6	58	92.308	Rhinopithecus_roxellana
ENSCVAG00000001863	SRSF6	95	85.039	ENSSBOG00000033708	-	58	92.308	Saimiri_boliviensis_boliviensis
ENSCVAG00000001863	SRSF6	79	93.750	ENSSMAG00000014861	-	97	67.176	Scophthalmus_maximus
ENSCVAG00000001863	SRSF6	81	89.024	ENSSDUG00000011036	-	83	90.789	Seriola_dumerili
ENSCVAG00000001863	SRSF6	81	89.024	ENSSLDG00000014858	-	83	90.789	Seriola_lalandi_dorsalis
ENSCVAG00000001863	SRSF6	95	86.400	ENSSPUG00000004967	SRSF6	58	91.026	Sphenodon_punctatus
ENSCVAG00000001863	SRSF6	81	86.585	ENSSPAG00000021913	-	79	89.474	Stegastes_partitus
ENSCVAG00000001863	SRSF6	79	96.250	ENSTRUG00000021397	-	87	96.250	Takifugu_rubripes
ENSCVAG00000001863	SRSF6	95	85.039	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSCVAG00000001863	SRSF6	82	59.036	ENSVVUG00000019276	-	55	58.974	Vulpes_vulpes