EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000001956 (Gene tree)
Gene ID: 107082029
Gene Symbol: zgc:103564
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9186 bases
Position: chrKL652546.1:1901715-1910900
Accession: 107082029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001005	RRM_1	PF00076.22	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000014133	-	1338	XM_015370450	ENSCVAP00000001005	273 (aa)	XP_015225936	UPI00074267AD

Gene Model

Click here to download ENSCVAG00000001956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000001956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000001956	zgc:103564	86	35.443	ENSG00000278023	RDM1	95	39.394	Homo_sapiens
ENSCVAG00000001956	zgc:103564	90	52.439	ENSAPOG00000021886	zgc:103564	73	61.702	Acanthochromis_polyacanthus
ENSCVAG00000001956	zgc:103564	97	59.245	ENSAPEG00000008929	zgc:103564	92	61.134	Amphiprion_percula
ENSCVAG00000001956	zgc:103564	88	36.437	ENSAPLG00000004384	RDM1	88	36.441	Anas_platyrhynchos
ENSCVAG00000001956	zgc:103564	99	38.434	ENSACAG00000012989	-	93	37.643	Anolis_carolinensis
ENSCVAG00000001956	zgc:103564	96	34.432	ENSANAG00000032752	RDM1	94	40.602	Aotus_nancymaae
ENSCVAG00000001956	zgc:103564	92	35.659	ENSBTAG00000000030	RDM1	90	35.659	Bos_taurus
ENSCVAG00000001956	zgc:103564	90	34.783	ENSCJAG00000015031	RDM1	94	41.353	Callithrix_jacchus
ENSCVAG00000001956	zgc:103564	89	35.039	ENSCAFG00000015160	-	98	34.524	Canis_familiaris
ENSCVAG00000001956	zgc:103564	92	35.659	ENSCHIG00000020607	RDM1	91	35.659	Capra_hircus
ENSCVAG00000001956	zgc:103564	96	34.559	ENSCPOG00000001495	-	89	35.409	Cavia_porcellus
ENSCVAG00000001956	zgc:103564	96	34.328	ENSCCAG00000035763	RDM1	94	39.850	Cebus_capucinus
ENSCVAG00000001956	zgc:103564	96	35.955	ENSCATG00000044451	RDM1	94	40.602	Cercocebus_atys
ENSCVAG00000001956	zgc:103564	84	36.170	ENSCSAG00000006209	RDM1	82	35.780	Chlorocebus_sabaeus
ENSCVAG00000001956	zgc:103564	82	34.783	ENSCPBG00000009105	RDM1	85	36.161	Chrysemys_picta_bellii
ENSCVAG00000001956	zgc:103564	96	36.330	ENSCANG00000041322	RDM1	85	43.137	Colobus_angolensis_palliatus
ENSCVAG00000001956	zgc:103564	90	36.508	ENSCGRG00001015927	Rdm1	89	36.364	Cricetulus_griseus_chok1gshd
ENSCVAG00000001956	zgc:103564	86	34.855	ENSDNOG00000045224	-	81	35.455	Dasypus_novemcinctus
ENSCVAG00000001956	zgc:103564	71	36.500	ENSEASG00005010554	RDM1	70	35.533	Equus_asinus_asinus
ENSCVAG00000001956	zgc:103564	90	34.766	ENSECAG00000022182	RDM1	90	34.375	Equus_caballus
ENSCVAG00000001956	zgc:103564	79	35.160	ENSEEUG00000006127	RDM1	87	35.160	Erinaceus_europaeus
ENSCVAG00000001956	zgc:103564	83	34.934	ENSFCAG00000043429	RDM1	94	41.353	Felis_catus
ENSCVAG00000001956	zgc:103564	98	38.971	ENSGALG00000000243	RDM1	89	39.370	Gallus_gallus
ENSCVAG00000001956	zgc:103564	79	37.054	ENSGAGG00000000293	-	70	36.607	Gopherus_agassizii
ENSCVAG00000001956	zgc:103564	96	35.206	ENSGGOG00000010584	RDM1	94	39.850	Gorilla_gorilla
ENSCVAG00000001956	zgc:103564	99	58.029	ENSHCOG00000002518	-	90	59.839	Hippocampus_comes
ENSCVAG00000001956	zgc:103564	98	35.165	ENSSTOG00000022491	RDM1	90	35.798	Ictidomys_tridecemlineatus
ENSCVAG00000001956	zgc:103564	90	34.921	ENSLAFG00000029300	RDM1	88	34.524	Loxodonta_africana
ENSCVAG00000001956	zgc:103564	96	35.581	ENSMFAG00000032968	RDM1	94	40.602	Macaca_fascicularis
ENSCVAG00000001956	zgc:103564	96	35.955	ENSMMUG00000006847	RDM1	85	43.137	Macaca_mulatta
ENSCVAG00000001956	zgc:103564	96	35.581	ENSMNEG00000039977	RDM1	94	40.602	Macaca_nemestrina
ENSCVAG00000001956	zgc:103564	96	36.330	ENSMLEG00000041158	RDM1	85	43.137	Mandrillus_leucophaeus
ENSCVAG00000001956	zgc:103564	93	36.187	ENSMGAG00000008774	RDM1	87	38.009	Meleagris_gallopavo
ENSCVAG00000001956	zgc:103564	98	36.918	ENSMAUG00000018559	Rdm1	89	36.905	Mesocricetus_auratus
ENSCVAG00000001956	zgc:103564	98	34.432	ENSMICG00000038651	RDM1	96	35.808	Microcebus_murinus
ENSCVAG00000001956	zgc:103564	98	37.091	ENSMOCG00000015095	Rdm1	93	37.452	Microtus_ochrogaster
ENSCVAG00000001956	zgc:103564	98	36.397	ENSMODG00000011101	RDM1	92	36.471	Monodelphis_domestica
ENSCVAG00000001956	zgc:103564	89	33.740	MGP_CAROLIEiJ_G0017226	Rdm1	89	33.597	Mus_caroli
ENSCVAG00000001956	zgc:103564	89	33.333	ENSMUSG00000010362	Rdm1	89	33.202	Mus_musculus
ENSCVAG00000001956	zgc:103564	98	33.096	MGP_PahariEiJ_G0018356	Rdm1	89	32.411	Mus_pahari
ENSCVAG00000001956	zgc:103564	89	32.927	MGP_SPRETEiJ_G0018069	Rdm1	89	32.806	Mus_spretus
ENSCVAG00000001956	zgc:103564	92	34.363	ENSMPUG00000008363	RDM1	90	34.363	Mustela_putorius_furo
ENSCVAG00000001956	zgc:103564	96	35.075	ENSNLEG00000014173	RDM1	86	42.157	Nomascus_leucogenys
ENSCVAG00000001956	zgc:103564	90	35.484	ENSMEUG00000015826	RDM1	99	35.081	Notamacropus_eugenii
ENSCVAG00000001956	zgc:103564	90	35.714	ENSOCUG00000022704	RDM1	97	35.178	Oryctolagus_cuniculus
ENSCVAG00000001956	zgc:103564	96	36.803	ENSOGAG00000011332	RDM1	87	37.751	Otolemur_garnettii
ENSCVAG00000001956	zgc:103564	96	35.206	ENSPPAG00000029969	RDM1	88	34.783	Pan_paniscus
ENSCVAG00000001956	zgc:103564	96	35.075	ENSPTRG00000009031	RDM1	94	39.850	Pan_troglodytes
ENSCVAG00000001956	zgc:103564	96	35.955	ENSPANG00000022933	RDM1	94	40.602	Papio_anubis
ENSCVAG00000001956	zgc:103564	92	35.294	ENSPEMG00000018985	Rdm1	90	34.902	Peromyscus_maniculatus_bairdii
ENSCVAG00000001956	zgc:103564	96	34.457	ENSPPYG00000008198	RDM1	88	34.127	Pongo_abelii
ENSCVAG00000001956	zgc:103564	98	34.432	ENSPCOG00000017995	RDM1	94	39.098	Propithecus_coquereli
ENSCVAG00000001956	zgc:103564	98	34.317	ENSPVAG00000001116	RDM1	99	36.111	Pteropus_vampyrus
ENSCVAG00000001956	zgc:103564	98	33.700	ENSRNOG00000020751	Rdm1	90	33.721	Rattus_norvegicus
ENSCVAG00000001956	zgc:103564	96	35.581	ENSRBIG00000030000	RDM1	94	40.602	Rhinopithecus_bieti
ENSCVAG00000001956	zgc:103564	96	35.581	ENSRROG00000035242	RDM1	85	43.137	Rhinopithecus_roxellana
ENSCVAG00000001956	zgc:103564	98	37.269	ENSSHAG00000013584	RDM1	92	37.795	Sarcophilus_harrisii
ENSCVAG00000001956	zgc:103564	93	37.308	ENSSPUG00000010941	RDM1	91	36.759	Sphenodon_punctatus
ENSCVAG00000001956	zgc:103564	99	64.103	ENSSPAG00000011690	-	92	67.063	Stegastes_partitus
ENSCVAG00000001956	zgc:103564	85	30.769	ENSSSCG00000017574	-	90	30.734	Sus_scrofa
ENSCVAG00000001956	zgc:103564	92	36.576	ENSUAMG00000027279	RDM1	90	36.187	Ursus_americanus
ENSCVAG00000001956	zgc:103564	92	36.576	ENSUMAG00000015423	RDM1	88	36.187	Ursus_maritimus