EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002103 (Gene tree)
Gene ID: 107095813
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4513 bases
Position: chrKL653075.1:425490-430002
Accession: 107095813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001148	Gar1	PF04410.14	3.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013885	-	1372	XM_015392128	ENSCVAP00000001148	209 (aa)	XP_015247614	UPI0007427EC0

Gene Model

Click here to download ENSCVAG00000002103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002103's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002103	gar1	52	98.148	ENSAPOG00000019754	gar1	51	98.148	Acanthochromis_polyacanthus
ENSCVAG00000002103	gar1	51	92.523	ENSAMEG00000004605	GAR1	52	92.523	Ailuropoda_melanoleuca
ENSCVAG00000002103	gar1	52	98.148	ENSAOCG00000020947	gar1	50	98.148	Amphiprion_ocellaris
ENSCVAG00000002103	gar1	52	98.148	ENSAPEG00000001676	gar1	50	98.148	Amphiprion_percula
ENSCVAG00000002103	gar1	52	97.222	ENSATEG00000003733	gar1	50	97.222	Anabas_testudineus
ENSCVAG00000002103	gar1	51	88.679	ENSAPLG00000010926	GAR1	59	88.679	Anas_platyrhynchos
ENSCVAG00000002103	gar1	51	91.509	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSCVAG00000002103	gar1	51	93.458	ENSBTAG00000000748	GAR1	51	93.458	Bos_taurus
ENSCVAG00000002103	gar1	50	93.269	ENSCAFG00020015566	GAR1	56	93.458	Canis_lupus_dingo
ENSCVAG00000002103	gar1	53	91.818	ENSCHIG00000016026	-	51	93.458	Capra_hircus
ENSCVAG00000002103	gar1	69	85.517	ENSTSYG00000013668	-	50	94.393	Carlito_syrichta
ENSCVAG00000002103	gar1	51	85.981	ENSTSYG00000026632	-	55	85.981	Carlito_syrichta
ENSCVAG00000002103	gar1	53	91.818	ENSCPOG00000004216	GAR1	77	89.130	Cavia_porcellus
ENSCVAG00000002103	gar1	53	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSCVAG00000002103	gar1	53	90.909	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSCVAG00000002103	gar1	51	92.523	ENSCSAG00000003922	GAR1	54	94.393	Chlorocebus_sabaeus
ENSCVAG00000002103	gar1	51	92.453	ENSCPBG00000004310	GAR1	54	92.453	Chrysemys_picta_bellii
ENSCVAG00000002103	gar1	58	94.215	ENSCGRG00001003919	Gar1	61	85.075	Cricetulus_griseus_chok1gshd
ENSCVAG00000002103	gar1	51	95.327	ENSDARG00000076526	gar1	67	78.808	Danio_rerio
ENSCVAG00000002103	gar1	51	93.458	ENSDNOG00000037632	GAR1	54	93.458	Dasypus_novemcinctus
ENSCVAG00000002103	gar1	53	92.727	ENSEASG00005004658	GAR1	50	94.393	Equus_asinus_asinus
ENSCVAG00000002103	gar1	53	91.818	ENSECAG00000013624	GAR1	54	93.458	Equus_caballus
ENSCVAG00000002103	gar1	50	96.154	ENSELUG00000021108	gar1	67	82.993	Esox_lucius
ENSCVAG00000002103	gar1	51	57.009	ENSFCAG00000025841	-	50	59.813	Felis_catus
ENSCVAG00000002103	gar1	51	93.458	ENSFCAG00000040791	-	51	93.458	Felis_catus
ENSCVAG00000002103	gar1	100	95.794	ENSFHEG00000008068	gar1	100	95.794	Fundulus_heteroclitus
ENSCVAG00000002103	gar1	52	91.667	ENSGMOG00000012419	gar1	58	81.679	Gadus_morhua
ENSCVAG00000002103	gar1	52	97.222	ENSGAFG00000016833	gar1	90	94.787	Gambusia_affinis
ENSCVAG00000002103	gar1	50	93.269	ENSGAGG00000004393	GAR1	53	93.269	Gopherus_agassizii
ENSCVAG00000002103	gar1	53	72.973	ENSGGOG00000036205	-	53	74.766	Gorilla_gorilla
ENSCVAG00000002103	gar1	51	94.393	ENSHGLG00000000493	GAR1	92	88.571	Heterocephalus_glaber_female
ENSCVAG00000002103	gar1	53	96.364	ENSIPUG00000003194	gar1	51	96.296	Ictalurus_punctatus
ENSCVAG00000002103	gar1	52	91.743	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSCVAG00000002103	gar1	53	94.595	ENSKMAG00000010402	gar1	51	95.370	Kryptolebias_marmoratus
ENSCVAG00000002103	gar1	51	87.736	ENSLACG00000003306	GAR1	75	84.000	Latimeria_chalumnae
ENSCVAG00000002103	gar1	52	82.407	ENSMFAG00000003572	-	52	82.243	Macaca_fascicularis
ENSCVAG00000002103	gar1	56	63.158	ENSMMUG00000038929	-	60	63.158	Macaca_mulatta
ENSCVAG00000002103	gar1	58	94.215	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSCVAG00000002103	gar1	60	90.400	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSCVAG00000002103	gar1	60	93.600	ENSMMOG00000004156	gar1	53	95.370	Mola_mola
ENSCVAG00000002103	gar1	51	96.262	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSCVAG00000002103	gar1	72	93.388	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSCVAG00000002103	gar1	72	91.935	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSCVAG00000002103	gar1	59	91.935	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSCVAG00000002103	gar1	72	91.935	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSCVAG00000002103	gar1	51	93.458	ENSMPUG00000008615	GAR1	51	93.458	Mustela_putorius_furo
ENSCVAG00000002103	gar1	66	86.131	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSCVAG00000002103	gar1	50	80.000	ENSNLEG00000034282	-	54	78.505	Nomascus_leucogenys
ENSCVAG00000002103	gar1	53	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSCVAG00000002103	gar1	51	92.523	ENSODEG00000011083	GAR1	55	92.523	Octodon_degus
ENSCVAG00000002103	gar1	51	94.393	ENSOCUG00000003901	GAR1	50	94.393	Oryctolagus_cuniculus
ENSCVAG00000002103	gar1	51	94.393	ENSOGAG00000004693	GAR1	50	94.393	Otolemur_garnettii
ENSCVAG00000002103	gar1	51	93.458	ENSOARG00000004910	GAR1	51	93.458	Ovis_aries
ENSCVAG00000002103	gar1	51	94.393	ENSPPAG00000014081	GAR1	54	94.393	Pan_paniscus
ENSCVAG00000002103	gar1	51	93.458	ENSPPRG00000023697	GAR1	51	93.458	Panthera_pardus
ENSCVAG00000002103	gar1	51	93.458	ENSPTIG00000021565	GAR1	51	93.458	Panthera_tigris_altaica
ENSCVAG00000002103	gar1	53	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSCVAG00000002103	gar1	51	96.262	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSCVAG00000002103	gar1	52	96.296	ENSPFOG00000024155	gar1	51	96.296	Poecilia_formosa
ENSCVAG00000002103	gar1	52	96.296	ENSPLAG00000015056	gar1	51	96.296	Poecilia_latipinna
ENSCVAG00000002103	gar1	52	97.222	ENSPMEG00000009320	gar1	52	97.222	Poecilia_mexicana
ENSCVAG00000002103	gar1	51	92.523	ENSPCOG00000027049	GAR1	55	94.393	Propithecus_coquereli
ENSCVAG00000002103	gar1	53	97.273	ENSPNYG00000020926	gar1	58	79.286	Pundamilia_nyererei
ENSCVAG00000002103	gar1	53	93.636	ENSPNAG00000019686	gar1	54	84.211	Pygocentrus_nattereri
ENSCVAG00000002103	gar1	72	84.000	ENSRNOG00000061146	Gar1	80	83.824	Rattus_norvegicus
ENSCVAG00000002103	gar1	51	94.393	ENSRBIG00000019547	GAR1	54	94.393	Rhinopithecus_bieti
ENSCVAG00000002103	gar1	54	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSCVAG00000002103	gar1	53	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSCVAG00000002103	gar1	54	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSCVAG00000002103	gar1	51	94.393	ENSSBOG00000024785	GAR1	50	94.393	Saimiri_boliviensis_boliviensis
ENSCVAG00000002103	gar1	50	92.308	ENSSHAG00000002161	GAR1	67	70.513	Sarcophilus_harrisii
ENSCVAG00000002103	gar1	52	94.444	ENSSMAG00000009976	gar1	50	94.444	Scophthalmus_maximus
ENSCVAG00000002103	gar1	52	97.222	ENSSLDG00000023264	gar1	51	97.222	Seriola_lalandi_dorsalis
ENSCVAG00000002103	gar1	51	93.396	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSCVAG00000002103	gar1	53	91.818	ENSSSCG00000009137	GAR1	53	93.458	Sus_scrofa
ENSCVAG00000002103	gar1	52	94.444	ENSTRUG00000020580	gar1	52	94.444	Takifugu_rubripes
ENSCVAG00000002103	gar1	50	97.143	ENSTNIG00000013023	gar1	61	97.222	Tetraodon_nigroviridis
ENSCVAG00000002103	gar1	50	93.269	ENSUAMG00000005652	GAR1	56	93.458	Ursus_americanus
ENSCVAG00000002103	gar1	51	93.458	ENSUMAG00000000776	GAR1	52	93.458	Ursus_maritimus
ENSCVAG00000002103	gar1	64	87.970	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes
ENSCVAG00000002103	gar1	52	98.148	ENSXCOG00000014843	GAR1	90	94.787	Xiphophorus_couchianus
ENSCVAG00000002103	gar1	52	98.148	ENSXMAG00000002316	GAR1	90	94.366	Xiphophorus_maculatus