EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002189 (Gene tree)
Gene ID: 107092862
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 21680 bases
Position: chrKL652898.1:181243-202922
Accession: 107092862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020670	SAP	PF02037.27	4.8e-10	1	1
ENSCVAP00000020696	SAP	PF02037.27	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013749	-	2170	XM_015387549	ENSCVAP00000020670	610 (aa)	XP_015243035	UPI000742B635
ENSCVAT00000013754	-	2171	-	ENSCVAP00000020696	624 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002189	xrcc6	99	56.158	ENSG00000196419	XRCC6	99	56.158	Homo_sapiens
ENSCVAG00000002189	xrcc6	99	83.580	ENSAPOG00000012704	xrcc6	100	83.580	Acanthochromis_polyacanthus
ENSCVAG00000002189	xrcc6	100	84.098	ENSACIG00000021277	xrcc6	100	84.098	Amphilophus_citrinellus
ENSCVAG00000002189	xrcc6	100	83.443	ENSAOCG00000021344	xrcc6	100	83.443	Amphiprion_ocellaris
ENSCVAG00000002189	xrcc6	100	83.770	ENSAPEG00000020712	xrcc6	100	83.770	Amphiprion_percula
ENSCVAG00000002189	xrcc6	100	83.443	ENSATEG00000007119	xrcc6	100	83.443	Anabas_testudineus
ENSCVAG00000002189	xrcc6	90	61.314	ENSAPLG00000004469	XRCC6	98	61.426	Anas_platyrhynchos
ENSCVAG00000002189	xrcc6	99	47.705	ENSANAG00000023445	-	99	47.869	Aotus_nancymaae
ENSCVAG00000002189	xrcc6	99	49.097	ENSANAG00000035230	-	99	49.589	Aotus_nancymaae
ENSCVAG00000002189	xrcc6	99	55.993	ENSANAG00000018684	XRCC6	98	57.248	Aotus_nancymaae
ENSCVAG00000002189	xrcc6	99	49.835	ENSANAG00000020017	-	99	49.835	Aotus_nancymaae
ENSCVAG00000002189	xrcc6	100	85.410	ENSACLG00000018608	xrcc6	100	85.410	Astatotilapia_calliptera
ENSCVAG00000002189	xrcc6	99	76.151	ENSAMXG00000007545	xrcc6	99	76.151	Astyanax_mexicanus
ENSCVAG00000002189	xrcc6	99	55.993	ENSCJAG00000045512	XRCC6	99	56.158	Callithrix_jacchus
ENSCVAG00000002189	xrcc6	99	55.556	ENSTSYG00000011348	XRCC6	99	55.501	Carlito_syrichta
ENSCVAG00000002189	xrcc6	99	54.618	ENSCCAG00000030468	-	99	54.618	Cebus_capucinus
ENSCVAG00000002189	xrcc6	99	47.030	ENSCCAG00000037663	-	96	47.030	Cebus_capucinus
ENSCVAG00000002189	xrcc6	99	53.279	ENSCCAG00000030041	-	94	53.038	Cebus_capucinus
ENSCVAG00000002189	xrcc6	99	44.481	ENSCCAG00000035711	-	99	45.140	Cebus_capucinus
ENSCVAG00000002189	xrcc6	99	56.486	ENSCATG00000042366	XRCC6	98	57.705	Cercocebus_atys
ENSCVAG00000002189	xrcc6	99	56.137	ENSCLAG00000016669	XRCC6	99	56.137	Chinchilla_lanigera
ENSCVAG00000002189	xrcc6	99	56.486	ENSCSAG00000005784	XRCC6	99	56.486	Chlorocebus_sabaeus
ENSCVAG00000002189	xrcc6	99	60.755	ENSCPBG00000020535	XRCC6	99	60.755	Chrysemys_picta_bellii
ENSCVAG00000002189	xrcc6	99	34.975	ENSCING00000000633	-	95	35.517	Ciona_intestinalis
ENSCVAG00000002189	xrcc6	99	56.486	ENSCANG00000031032	XRCC6	99	56.486	Colobus_angolensis_palliatus
ENSCVAG00000002189	xrcc6	99	52.224	ENSCGRG00001019029	Xrcc6	99	51.809	Cricetulus_griseus_chok1gshd
ENSCVAG00000002189	xrcc6	99	56.672	ENSCGRG00000001528	Xrcc6	99	56.672	Cricetulus_griseus_crigri
ENSCVAG00000002189	xrcc6	100	77.869	ENSCSEG00000020434	xrcc6	100	77.869	Cynoglossus_semilaevis
ENSCVAG00000002189	xrcc6	99	74.384	ENSDARG00000071551	xrcc6	99	74.548	Danio_rerio
ENSCVAG00000002189	xrcc6	78	53.041	ENSETEG00000015333	-	77	53.041	Echinops_telfairi
ENSCVAG00000002189	xrcc6	99	55.483	ENSEASG00005001514	XRCC6	99	56.250	Equus_asinus_asinus
ENSCVAG00000002189	xrcc6	99	55.921	ENSECAG00000017563	XRCC6	99	56.406	Equus_caballus
ENSCVAG00000002189	xrcc6	100	73.934	ENSELUG00000020301	xrcc6	100	73.934	Esox_lucius
ENSCVAG00000002189	xrcc6	99	60.033	ENSFALG00000011908	XRCC6	96	60.196	Ficedula_albicollis
ENSCVAG00000002189	xrcc6	100	89.672	ENSFHEG00000016833	xrcc6	100	89.672	Fundulus_heteroclitus
ENSCVAG00000002189	xrcc6	99	67.101	ENSGMOG00000013524	xrcc6	100	67.101	Gadus_morhua
ENSCVAG00000002189	xrcc6	99	59.121	ENSGALG00000011932	XRCC6	94	60.788	Gallus_gallus
ENSCVAG00000002189	xrcc6	100	86.885	ENSGAFG00000008130	xrcc6	100	86.885	Gambusia_affinis
ENSCVAG00000002189	xrcc6	99	80.782	ENSGACG00000004868	xrcc6	99	80.782	Gasterosteus_aculeatus
ENSCVAG00000002189	xrcc6	99	60.591	ENSGAGG00000017518	XRCC6	99	60.591	Gopherus_agassizii
ENSCVAG00000002189	xrcc6	99	56.158	ENSGGOG00000015885	XRCC6	99	56.158	Gorilla_gorilla
ENSCVAG00000002189	xrcc6	93	86.042	ENSHBUG00000023281	xrcc6	100	86.042	Haplochromis_burtoni
ENSCVAG00000002189	xrcc6	99	55.065	ENSHGLG00000018078	XRCC6	99	54.754	Heterocephalus_glaber_female
ENSCVAG00000002189	xrcc6	99	55.065	ENSHGLG00100011264	XRCC6	99	54.754	Heterocephalus_glaber_male
ENSCVAG00000002189	xrcc6	100	77.541	ENSHCOG00000009821	xrcc6	100	77.541	Hippocampus_comes
ENSCVAG00000002189	xrcc6	99	75.987	ENSIPUG00000000767	xrcc6	99	75.987	Ictalurus_punctatus
ENSCVAG00000002189	xrcc6	99	54.992	ENSSTOG00000009490	XRCC6	99	54.992	Ictidomys_tridecemlineatus
ENSCVAG00000002189	xrcc6	99	51.974	ENSJJAG00000017136	Xrcc6	99	52.467	Jaculus_jaculus
ENSCVAG00000002189	xrcc6	99	86.535	ENSKMAG00000002141	xrcc6	99	86.535	Kryptolebias_marmoratus
ENSCVAG00000002189	xrcc6	99	83.224	ENSLBEG00000002691	xrcc6	99	83.224	Labrus_bergylta
ENSCVAG00000002189	xrcc6	87	69.307	ENSLOCG00000011533	xrcc6	99	69.307	Lepisosteus_oculatus
ENSCVAG00000002189	xrcc6	99	56.486	ENSMFAG00000003352	XRCC6	99	56.486	Macaca_fascicularis
ENSCVAG00000002189	xrcc6	99	56.486	ENSMMUG00000001856	XRCC6	99	56.486	Macaca_mulatta
ENSCVAG00000002189	xrcc6	99	56.486	ENSMNEG00000035076	XRCC6	98	57.509	Macaca_nemestrina
ENSCVAG00000002189	xrcc6	99	56.486	ENSMLEG00000019869	XRCC6	99	56.486	Mandrillus_leucophaeus
ENSCVAG00000002189	xrcc6	100	81.178	ENSMAMG00000003368	xrcc6	100	81.178	Mastacembelus_armatus
ENSCVAG00000002189	xrcc6	96	81.261	ENSMAMG00000003405	xrcc6	97	81.261	Mastacembelus_armatus
ENSCVAG00000002189	xrcc6	100	85.246	ENSMZEG00005028080	xrcc6	100	85.246	Maylandia_zebra
ENSCVAG00000002189	xrcc6	99	59.512	ENSMGAG00000012146	XRCC6	99	59.675	Meleagris_gallopavo
ENSCVAG00000002189	xrcc6	99	56.343	ENSMAUG00000017340	Xrcc6	99	56.343	Mesocricetus_auratus
ENSCVAG00000002189	xrcc6	99	56.343	ENSMOCG00000015717	Xrcc6	99	56.507	Microtus_ochrogaster
ENSCVAG00000002189	xrcc6	99	80.992	ENSMMOG00000003536	xrcc6	99	80.992	Mola_mola
ENSCVAG00000002189	xrcc6	100	82.459	ENSMALG00000013912	xrcc6	95	82.459	Monopterus_albus
ENSCVAG00000002189	xrcc6	99	52.459	MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.459	Mus_caroli
ENSCVAG00000002189	xrcc6	99	56.557	ENSMUSG00000022471	Xrcc6	99	58.935	Mus_musculus
ENSCVAG00000002189	xrcc6	99	56.721	MGP_PahariEiJ_G0020069	Xrcc6	99	56.721	Mus_pahari
ENSCVAG00000002189	xrcc6	96	57.705	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	Mus_spretus
ENSCVAG00000002189	xrcc6	99	55.684	ENSNGAG00000013750	Xrcc6	99	55.684	Nannospalax_galili
ENSCVAG00000002189	xrcc6	100	85.574	ENSNBRG00000004125	xrcc6	100	85.574	Neolamprologus_brichardi
ENSCVAG00000002189	xrcc6	95	58.176	ENSOPRG00000002386	XRCC6	99	58.176	Ochotona_princeps
ENSCVAG00000002189	xrcc6	99	56.137	ENSODEG00000015847	XRCC6	99	55.810	Octodon_degus
ENSCVAG00000002189	xrcc6	100	85.410	ENSONIG00000019715	xrcc6	100	85.410	Oreochromis_niloticus
ENSCVAG00000002189	xrcc6	68	58.795	ENSOANG00000011328	XRCC6	99	58.795	Ornithorhynchus_anatinus
ENSCVAG00000002189	xrcc6	99	55.757	ENSOCUG00000006948	XRCC6	99	56.086	Oryctolagus_cuniculus
ENSCVAG00000002189	xrcc6	100	82.815	ENSORLG00020007820	xrcc6	100	82.815	Oryzias_latipes_hni
ENSCVAG00000002189	xrcc6	100	82.979	ENSORLG00015006406	xrcc6	100	82.979	Oryzias_latipes_hsok
ENSCVAG00000002189	xrcc6	100	83.470	ENSOMEG00000008998	xrcc6	100	83.470	Oryzias_melastigma
ENSCVAG00000002189	xrcc6	99	55.810	ENSOGAG00000008821	XRCC6	99	56.086	Otolemur_garnettii
ENSCVAG00000002189	xrcc6	92	56.676	ENSPPAG00000037167	XRCC6	99	56.676	Pan_paniscus
ENSCVAG00000002189	xrcc6	99	56.158	ENSPTRG00000022548	XRCC6	99	57.388	Pan_troglodytes
ENSCVAG00000002189	xrcc6	99	56.158	ENSPTRG00000045824	XRCC6	99	57.388	Pan_troglodytes
ENSCVAG00000002189	xrcc6	99	56.650	ENSPANG00000001252	XRCC6	99	57.877	Papio_anubis
ENSCVAG00000002189	xrcc6	99	70.888	ENSPKIG00000003974	xrcc6	99	70.888	Paramormyrops_kingsleyae
ENSCVAG00000002189	xrcc6	99	79.734	ENSPMGG00000014220	xrcc6	100	79.734	Periophthalmus_magnuspinnatus
ENSCVAG00000002189	xrcc6	99	56.013	ENSPEMG00000023446	Xrcc6	99	56.013	Peromyscus_maniculatus_bairdii
ENSCVAG00000002189	xrcc6	99	58.320	ENSPCIG00000026409	XRCC6	99	58.320	Phascolarctos_cinereus
ENSCVAG00000002189	xrcc6	100	90.328	ENSPFOG00000017173	xrcc6	100	90.328	Poecilia_formosa
ENSCVAG00000002189	xrcc6	100	89.836	ENSPLAG00000000562	xrcc6	100	89.836	Poecilia_latipinna
ENSCVAG00000002189	xrcc6	100	89.836	ENSPMEG00000018478	xrcc6	100	89.836	Poecilia_mexicana
ENSCVAG00000002189	xrcc6	100	88.399	ENSPREG00000020957	xrcc6	94	88.254	Poecilia_reticulata
ENSCVAG00000002189	xrcc6	99	50.082	ENSPPYG00000011876	XRCC6	99	50.082	Pongo_abelii
ENSCVAG00000002189	xrcc6	99	55.848	ENSPVAG00000001168	XRCC6	99	55.848	Pteropus_vampyrus
ENSCVAG00000002189	xrcc6	100	85.082	ENSPNYG00000003815	xrcc6	100	80.967	Pundamilia_nyererei
ENSCVAG00000002189	xrcc6	99	56.557	ENSRNOG00000006392	Xrcc6	99	56.721	Rattus_norvegicus
ENSCVAG00000002189	xrcc6	99	52.217	ENSRBIG00000039794	XRCC6	99	53.425	Rhinopithecus_bieti
ENSCVAG00000002189	xrcc6	99	56.486	ENSRROG00000030297	XRCC6	99	56.486	Rhinopithecus_roxellana
ENSCVAG00000002189	xrcc6	67	50.611	ENSSBOG00000024724	-	99	50.985	Saimiri_boliviensis_boliviensis
ENSCVAG00000002189	xrcc6	99	57.026	ENSSHAG00000010790	XRCC6	99	57.026	Sarcophilus_harrisii
ENSCVAG00000002189	xrcc6	99	75.329	ENSSFOG00015014409	xrcc6	99	75.329	Scleropages_formosus
ENSCVAG00000002189	xrcc6	100	83.770	ENSSMAG00000006496	xrcc6	100	83.770	Scophthalmus_maximus
ENSCVAG00000002189	xrcc6	100	84.754	ENSSDUG00000007542	xrcc6	100	84.754	Seriola_dumerili
ENSCVAG00000002189	xrcc6	100	84.262	ENSSLDG00000009974	xrcc6	100	84.262	Seriola_lalandi_dorsalis
ENSCVAG00000002189	xrcc6	99	59.150	ENSSPUG00000012086	XRCC6	99	59.247	Sphenodon_punctatus
ENSCVAG00000002189	xrcc6	100	84.262	ENSSPAG00000015199	xrcc6	100	84.262	Stegastes_partitus
ENSCVAG00000002189	xrcc6	95	61.815	ENSTGUG00000009852	-	95	61.815	Taeniopygia_guttata
ENSCVAG00000002189	xrcc6	99	76.847	ENSTRUG00000017070	xrcc6	99	76.847	Takifugu_rubripes
ENSCVAG00000002189	xrcc6	96	76.481	ENSTNIG00000012947	xrcc6	99	76.481	Tetraodon_nigroviridis
ENSCVAG00000002189	xrcc6	96	53.253	ENSTBEG00000011736	XRCC6	99	53.253	Tupaia_belangeri
ENSCVAG00000002189	xrcc6	99	46.546	ENSTTRG00000006749	XRCC6	99	47.204	Tursiops_truncatus
ENSCVAG00000002189	xrcc6	100	88.689	ENSXMAG00000009691	xrcc6	100	88.689	Xiphophorus_maculatus