EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002226 (Gene tree)
Gene ID: 107097314
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 16335 bases
Position: chrKL653184.1:233195-249529
Accession: 107097314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001265	RRM_1	PF00076.22	4.1e-12	1	1
ENSCVAP00000001265	SAP	PF02037.27	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013695	-	4271	XM_015394419	ENSCVAP00000001265	745 (aa)	XP_015249905	UPI000742AFF4

Gene Model

Click here to download ENSCVAG00000002226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002226	safb	94	39.763	ENSG00000160633	SAFB	76	62.791	Homo_sapiens
ENSCVAG00000002226	safb	100	66.145	ENSAPOG00000022508	safb	100	65.542	Acanthochromis_polyacanthus
ENSCVAG00000002226	safb	100	65.272	ENSACIG00000006247	safb	100	66.583	Amphilophus_citrinellus
ENSCVAG00000002226	safb	100	62.500	ENSAOCG00000006308	safb	100	63.808	Amphiprion_ocellaris
ENSCVAG00000002226	safb	100	66.065	ENSAPEG00000023342	safb	100	65.223	Amphiprion_percula
ENSCVAG00000002226	safb	100	65.311	ENSATEG00000004998	safb	100	65.431	Anabas_testudineus
ENSCVAG00000002226	safb	59	37.852	ENSAPLG00000005780	-	97	41.163	Anas_platyrhynchos
ENSCVAG00000002226	safb	61	56.250	ENSACAG00000016893	-	89	44.976	Anolis_carolinensis
ENSCVAG00000002226	safb	94	40.653	ENSANAG00000028821	SAFB	94	40.593	Aotus_nancymaae
ENSCVAG00000002226	safb	100	67.758	ENSACLG00000001926	safb	100	68.136	Astatotilapia_calliptera
ENSCVAG00000002226	safb	66	63.720	ENSAMXG00000018154	safb	99	55.336	Astyanax_mexicanus
ENSCVAG00000002226	safb	63	45.855	ENSBTAG00000007875	SAFB	95	39.614	Bos_taurus
ENSCVAG00000002226	safb	76	48.718	ENSCJAG00000017081	SAFB	92	45.294	Callithrix_jacchus
ENSCVAG00000002226	safb	65	40.589	ENSCAFG00000018803	SAFB	81	39.887	Canis_familiaris
ENSCVAG00000002226	safb	65	40.589	ENSCAFG00020018943	SAFB	94	39.887	Canis_lupus_dingo
ENSCVAG00000002226	safb	63	45.855	ENSCHIG00000007262	SAFB	95	39.773	Capra_hircus
ENSCVAG00000002226	safb	55	41.296	ENSTSYG00000001851	-	87	39.749	Carlito_syrichta
ENSCVAG00000002226	safb	94	40.339	ENSCCAG00000020193	SAFB	94	40.389	Cebus_capucinus
ENSCVAG00000002226	safb	94	39.835	ENSCATG00000029994	SAFB	94	39.797	Cercocebus_atys
ENSCVAG00000002226	safb	94	39.778	ENSCSAG00000009949	SAFB	94	39.797	Chlorocebus_sabaeus
ENSCVAG00000002226	safb	90	40.714	ENSCPBG00000010928	-	95	41.544	Chrysemys_picta_bellii
ENSCVAG00000002226	safb	90	41.411	ENSCPBG00000010936	-	96	42.173	Chrysemys_picta_bellii
ENSCVAG00000002226	safb	94	35.751	ENSCANG00000004774	-	93	34.881	Colobus_angolensis_palliatus
ENSCVAG00000002226	safb	97	39.771	ENSCANG00000019754	-	93	40.506	Colobus_angolensis_palliatus
ENSCVAG00000002226	safb	99	61.979	ENSCSEG00000019870	safb	100	62.500	Cynoglossus_semilaevis
ENSCVAG00000002226	safb	96	55.407	ENSDARG00000020467	safb	98	54.706	Danio_rerio
ENSCVAG00000002226	safb	65	40.887	ENSDNOG00000015746	SAFB	95	39.233	Dasypus_novemcinctus
ENSCVAG00000002226	safb	64	36.410	ENSEASG00005023019	SAFB	91	51.969	Equus_asinus_asinus
ENSCVAG00000002226	safb	99	56.893	ENSELUG00000022327	safb	99	57.444	Esox_lucius
ENSCVAG00000002226	safb	65	40.426	ENSFCAG00000011835	SAFB	94	39.616	Felis_catus
ENSCVAG00000002226	safb	64	39.358	ENSFALG00000013882	-	87	41.808	Ficedula_albicollis
ENSCVAG00000002226	safb	59	50.340	ENSFDAG00000020306	SAFB	53	50.340	Fukomys_damarensis
ENSCVAG00000002226	safb	100	86.640	ENSFHEG00000004219	safb	100	86.640	Fundulus_heteroclitus
ENSCVAG00000002226	safb	100	57.901	ENSGMOG00000014280	safb	100	58.484	Gadus_morhua
ENSCVAG00000002226	safb	99	38.353	ENSGALG00000013365	-	96	41.463	Gallus_gallus
ENSCVAG00000002226	safb	100	80.255	ENSGAFG00000016162	safb	100	80.255	Gambusia_affinis
ENSCVAG00000002226	safb	100	60.397	ENSGACG00000011385	safb	100	60.921	Gasterosteus_aculeatus
ENSCVAG00000002226	safb	70	48.161	ENSGAGG00000017702	-	88	48.866	Gopherus_agassizii
ENSCVAG00000002226	safb	94	44.321	ENSGAGG00000008424	-	97	44.519	Gopherus_agassizii
ENSCVAG00000002226	safb	94	40.204	ENSGGOG00000015109	SAFB	94	40.711	Gorilla_gorilla
ENSCVAG00000002226	safb	100	64.005	ENSHBUG00000009218	safb	100	63.371	Haplochromis_burtoni
ENSCVAG00000002226	safb	93	59.524	ENSHCOG00000001705	safb	99	58.995	Hippocampus_comes
ENSCVAG00000002226	safb	99	55.423	ENSIPUG00000024869	safb2	100	54.785	Ictalurus_punctatus
ENSCVAG00000002226	safb	100	70.466	ENSKMAG00000022308	safb	100	71.078	Kryptolebias_marmoratus
ENSCVAG00000002226	safb	100	64.929	ENSLBEG00000006015	safb	100	64.455	Labrus_bergylta
ENSCVAG00000002226	safb	64	41.087	ENSLACG00000018090	SAFB	96	46.277	Latimeria_chalumnae
ENSCVAG00000002226	safb	98	53.991	ENSLOCG00000003613	safb	99	54.930	Lepisosteus_oculatus
ENSCVAG00000002226	safb	94	40.378	ENSLAFG00000003840	SAFB	95	40.452	Loxodonta_africana
ENSCVAG00000002226	safb	94	39.835	ENSMFAG00000003885	SAFB	94	39.820	Macaca_fascicularis
ENSCVAG00000002226	safb	94	40.770	ENSMMUG00000017970	SAFB	94	40.367	Macaca_mulatta
ENSCVAG00000002226	safb	94	38.969	ENSMNEG00000035637	SAFB	94	40.023	Macaca_nemestrina
ENSCVAG00000002226	safb	94	38.618	ENSMLEG00000038637	SAFB	94	39.380	Mandrillus_leucophaeus
ENSCVAG00000002226	safb	100	65.155	ENSMAMG00000003357	safb	91	64.558	Mastacembelus_armatus
ENSCVAG00000002226	safb	100	67.884	ENSMZEG00005009120	safb	100	68.262	Maylandia_zebra
ENSCVAG00000002226	safb	97	37.307	ENSMGAG00000001101	-	97	40.678	Meleagris_gallopavo
ENSCVAG00000002226	safb	65	41.636	ENSMICG00000008739	-	93	41.169	Microcebus_murinus
ENSCVAG00000002226	safb	50	54.545	ENSMOCG00000014040	Safb	73	54.331	Microtus_ochrogaster
ENSCVAG00000002226	safb	93	40.045	ENSMODG00000001236	SAFB	93	40.289	Monodelphis_domestica
ENSCVAG00000002226	safb	100	64.142	ENSMALG00000020330	safb	100	63.432	Monopterus_albus
ENSCVAG00000002226	safb	50	55.372	ENSMUSG00000071054	Safb	71	50.694	Mus_musculus
ENSCVAG00000002226	safb	98	40.067	ENSMLUG00000001081	SAFB	94	39.002	Myotis_lucifugus
ENSCVAG00000002226	safb	52	53.543	ENSNGAG00000019882	Safb	75	50.794	Nannospalax_galili
ENSCVAG00000002226	safb	93	39.886	ENSNLEG00000013551	SAFB	97	40.242	Nomascus_leucogenys
ENSCVAG00000002226	safb	100	64.755	ENSONIG00000002318	safb	100	64.516	Oreochromis_niloticus
ENSCVAG00000002226	safb	59	42.125	ENSOCUG00000014628	SAFB	65	40.472	Oryctolagus_cuniculus
ENSCVAG00000002226	safb	98	66.204	ENSORLG00000016989	safb	100	66.010	Oryzias_latipes
ENSCVAG00000002226	safb	98	62.953	ENSORLG00020000404	safb	100	63.085	Oryzias_latipes_hni
ENSCVAG00000002226	safb	98	66.709	ENSORLG00015010733	safb	100	66.667	Oryzias_latipes_hsok
ENSCVAG00000002226	safb	100	65.845	ENSOMEG00000009066	safb	100	65.968	Oryzias_melastigma
ENSCVAG00000002226	safb	59	40.367	ENSOARG00000007662	-	95	36.538	Ovis_aries
ENSCVAG00000002226	safb	94	40.024	ENSPPAG00000035129	SAFB	94	39.933	Pan_paniscus
ENSCVAG00000002226	safb	65	40.426	ENSPPRG00000017197	SAFB	94	39.616	Panthera_pardus
ENSCVAG00000002226	safb	94	40.024	ENSPTRG00000010335	SAFB	94	39.933	Pan_troglodytes
ENSCVAG00000002226	safb	94	40.763	ENSPANG00000007770	SAFB	94	39.933	Papio_anubis
ENSCVAG00000002226	safb	99	54.181	ENSPKIG00000009902	safb	99	55.161	Paramormyrops_kingsleyae
ENSCVAG00000002226	safb	98	41.991	ENSPSIG00000011679	-	97	44.084	Pelodiscus_sinensis
ENSCVAG00000002226	safb	98	42.716	ENSPSIG00000009367	-	94	43.164	Pelodiscus_sinensis
ENSCVAG00000002226	safb	100	84.544	ENSPFOG00000007745	safb	100	84.544	Poecilia_formosa
ENSCVAG00000002226	safb	100	80.706	ENSPLAG00000001614	safb	100	80.706	Poecilia_latipinna
ENSCVAG00000002226	safb	100	84.412	ENSPMEG00000021023	safb	100	84.412	Poecilia_mexicana
ENSCVAG00000002226	safb	100	82.490	ENSPREG00000012496	safb	100	82.490	Poecilia_reticulata
ENSCVAG00000002226	safb	94	39.644	ENSPPYG00000009428	SAFB	94	39.887	Pongo_abelii
ENSCVAG00000002226	safb	64	36.877	ENSPCAG00000006475	SAFB	94	37.003	Procavia_capensis
ENSCVAG00000002226	safb	94	37.664	ENSPCOG00000014090	SAFB	93	38.882	Propithecus_coquereli
ENSCVAG00000002226	safb	70	54.630	ENSPVAG00000004913	SAFB	60	54.630	Pteropus_vampyrus
ENSCVAG00000002226	safb	66	65.730	ENSPNAG00000021838	safb	98	56.190	Pygocentrus_nattereri
ENSCVAG00000002226	safb	50	56.198	ENSRNOG00000050543	Safb	72	50.327	Rattus_norvegicus
ENSCVAG00000002226	safb	94	40.144	ENSRBIG00000042509	SAFB	93	40.317	Rhinopithecus_bieti
ENSCVAG00000002226	safb	94	39.716	ENSRROG00000029278	SAFB	94	39.708	Rhinopithecus_roxellana
ENSCVAG00000002226	safb	94	40.307	ENSSBOG00000026291	SAFB	94	39.932	Saimiri_boliviensis_boliviensis
ENSCVAG00000002226	safb	99	56.366	ENSSFOG00015008156	safb	99	55.671	Scleropages_formosus
ENSCVAG00000002226	safb	100	65.394	ENSSMAG00000009316	safb	100	64.916	Scophthalmus_maximus
ENSCVAG00000002226	safb	100	67.595	ENSSDUG00000009652	safb	100	66.962	Seriola_dumerili
ENSCVAG00000002226	safb	100	65.663	ENSSLDG00000001670	safb	100	65.301	Seriola_lalandi_dorsalis
ENSCVAG00000002226	safb	59	39.560	ENSSARG00000010475	SAFB	96	38.721	Sorex_araneus
ENSCVAG00000002226	safb	52	41.322	ENSSPUG00000009747	-	98	38.491	Sphenodon_punctatus
ENSCVAG00000002226	safb	98	64.541	ENSSPAG00000015682	safb	99	63.520	Stegastes_partitus
ENSCVAG00000002226	safb	64	40.268	ENSSSCG00000013522	SAFB	93	42.140	Sus_scrofa
ENSCVAG00000002226	safb	51	52.075	ENSTGUG00000000502	-	83	47.826	Taeniopygia_guttata
ENSCVAG00000002226	safb	100	65.122	ENSTRUG00000003567	safb	100	64.024	Takifugu_rubripes
ENSCVAG00000002226	safb	90	55.514	ENSTNIG00000015470	safb	100	54.135	Tetraodon_nigroviridis
ENSCVAG00000002226	safb	74	75.000	ENSTTRG00000013588	SAFB	67	75.000	Tursiops_truncatus
ENSCVAG00000002226	safb	60	48.718	ENSUMAG00000009734	SAFB	55	66.667	Ursus_maritimus
ENSCVAG00000002226	safb	65	40.426	ENSVVUG00000013720	SAFB	81	39.797	Vulpes_vulpes
ENSCVAG00000002226	safb	63	41.075	ENSXETG00000008755	safb	95	43.426	Xenopus_tropicalis
ENSCVAG00000002226	safb	100	84.544	ENSXMAG00000003458	safb	100	84.544	Xiphophorus_maculatus