EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002404 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4646 bases
Position: chrKL652897.1:641291-645936
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001425	RRM_1	PF00076.22	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013442	-	372	-	ENSCVAP00000001425	123 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002404	-	95	73.504	ENSG00000153914	SREK1	85	84.706	Homo_sapiens
ENSCVAG00000002404	-	69	70.588	ENSG00000116754	SRSF11	70	68.889	Homo_sapiens
ENSCVAG00000002404	-	68	66.667	ENSAPOG00000004488	-	78	66.667	Acanthochromis_polyacanthus
ENSCVAG00000002404	-	67	66.265	ENSAPOG00000007244	-	60	66.265	Acanthochromis_polyacanthus
ENSCVAG00000002404	-	68	66.667	ENSACIG00000018075	-	78	66.667	Amphilophus_citrinellus
ENSCVAG00000002404	-	100	81.600	ENSACIG00000015055	-	100	81.600	Amphilophus_citrinellus
ENSCVAG00000002404	-	74	62.637	ENSACIG00000012348	-	96	62.637	Amphilophus_citrinellus
ENSCVAG00000002404	-	71	95.402	ENSAOCG00000024368	-	88	95.402	Amphiprion_ocellaris
ENSCVAG00000002404	-	67	67.073	ENSAOCG00000000739	-	87	67.073	Amphiprion_ocellaris
ENSCVAG00000002404	-	68	66.667	ENSAPEG00000003619	SRSF11	78	66.667	Amphiprion_percula
ENSCVAG00000002404	-	71	96.552	ENSAPEG00000002218	-	95	96.552	Amphiprion_percula
ENSCVAG00000002404	-	69	64.706	ENSAPEG00000003142	SRSF11	87	65.476	Amphiprion_percula
ENSCVAG00000002404	-	67	67.073	ENSATEG00000011691	srsf11	77	66.265	Anabas_testudineus
ENSCVAG00000002404	-	66	96.296	ENSATEG00000009464	-	89	96.296	Anabas_testudineus
ENSCVAG00000002404	-	68	66.667	ENSATEG00000007534	-	78	66.667	Anabas_testudineus
ENSCVAG00000002404	-	98	71.901	ENSANAG00000031358	SREK1	85	84.706	Aotus_nancymaae
ENSCVAG00000002404	-	67	66.265	ENSACLG00000000623	srsf11	85	66.265	Astatotilapia_calliptera
ENSCVAG00000002404	-	66	88.889	ENSBTAG00000007321	SREK1	85	85.882	Bos_taurus
ENSCVAG00000002404	-	69	84.706	ENSCJAG00000015950	SREK1	85	84.706	Callithrix_jacchus
ENSCVAG00000002404	-	69	69.412	ENSCAFG00020017255	-	76	69.767	Canis_lupus_dingo
ENSCVAG00000002404	-	95	74.359	ENSCAFG00020019449	-	85	85.882	Canis_lupus_dingo
ENSCVAG00000002404	-	69	69.412	ENSCHIG00000025295	SRSF11	76	67.778	Capra_hircus
ENSCVAG00000002404	-	66	88.889	ENSCHIG00000025052	-	85	85.882	Capra_hircus
ENSCVAG00000002404	-	95	74.359	ENSTSYG00000036957	SREK1	85	85.882	Carlito_syrichta
ENSCVAG00000002404	-	69	65.882	ENSTSYG00000033270	-	63	65.169	Carlito_syrichta
ENSCVAG00000002404	-	98	71.901	ENSCCAG00000020591	SREK1	85	84.706	Cebus_capucinus
ENSCVAG00000002404	-	66	87.654	ENSCATG00000031482	SREK1	85	84.706	Cercocebus_atys
ENSCVAG00000002404	-	96	55.372	ENSCPBG00000022430	-	89	55.372	Chrysemys_picta_bellii
ENSCVAG00000002404	-	95	73.504	ENSCPBG00000026866	SREK1	88	73.504	Chrysemys_picta_bellii
ENSCVAG00000002404	-	66	87.654	ENSCANG00000030421	SREK1	85	84.706	Colobus_angolensis_palliatus
ENSCVAG00000002404	-	100	77.236	ENSCSEG00000013934	-	95	86.047	Cynoglossus_semilaevis
ENSCVAG00000002404	-	85	58.095	ENSDARG00000098574	srsf11	95	63.953	Danio_rerio
ENSCVAG00000002404	-	95	76.068	ENSDORG00000023160	-	90	74.380	Dipodomys_ordii
ENSCVAG00000002404	-	95	74.359	ENSEASG00005006832	-	90	72.727	Equus_asinus_asinus
ENSCVAG00000002404	-	69	69.412	ENSEASG00005007847	SRSF11	75	69.767	Equus_asinus_asinus
ENSCVAG00000002404	-	95	74.359	ENSECAG00000035731	-	90	72.727	Equus_caballus
ENSCVAG00000002404	-	66	88.889	ENSFCAG00000036884	-	85	85.882	Felis_catus
ENSCVAG00000002404	-	69	70.588	ENSFCAG00000034448	-	71	68.889	Felis_catus
ENSCVAG00000002404	-	98	87.903	ENSFHEG00000020959	-	96	87.903	Fundulus_heteroclitus
ENSCVAG00000002404	-	66	88.889	ENSGALG00000043541	SREK1	82	88.889	Gallus_gallus
ENSCVAG00000002404	-	100	84.000	ENSGAFG00000001732	-	100	84.000	Gambusia_affinis
ENSCVAG00000002404	-	85	55.652	ENSGAFG00000021415	SRSF11	51	55.652	Gambusia_affinis
ENSCVAG00000002404	-	74	69.231	ENSGAGG00000022411	-	88	69.231	Gopherus_agassizii
ENSCVAG00000002404	-	95	73.504	ENSGAGG00000006087	SREK1	88	73.504	Gopherus_agassizii
ENSCVAG00000002404	-	95	73.504	ENSGGOG00000004737	SREK1	85	84.706	Gorilla_gorilla
ENSCVAG00000002404	-	98	95.041	ENSHBUG00000007082	-	90	95.041	Haplochromis_burtoni
ENSCVAG00000002404	-	72	62.921	ENSHCOG00000016860	-	91	62.921	Hippocampus_comes
ENSCVAG00000002404	-	66	93.827	ENSHCOG00000017228	-	79	94.118	Hippocampus_comes
ENSCVAG00000002404	-	66	88.889	ENSSTOG00000008850	SREK1	85	85.882	Ictidomys_tridecemlineatus
ENSCVAG00000002404	-	95	75.214	ENSJJAG00000008846	-	92	73.554	Jaculus_jaculus
ENSCVAG00000002404	-	67	66.265	ENSLBEG00000024167	srsf11	85	66.265	Labrus_bergylta
ENSCVAG00000002404	-	100	79.070	ENSLBEG00000022954	-	93	79.070	Labrus_bergylta
ENSCVAG00000002404	-	95	73.504	ENSMFAG00000039823	SREK1	85	84.706	Macaca_fascicularis
ENSCVAG00000002404	-	66	87.654	ENSMMUG00000014586	SREK1	78	84.706	Macaca_mulatta
ENSCVAG00000002404	-	66	87.654	ENSMNEG00000030723	SREK1	85	84.706	Macaca_nemestrina
ENSCVAG00000002404	-	66	87.654	ENSMLEG00000039078	SREK1	85	84.706	Mandrillus_leucophaeus
ENSCVAG00000002404	-	70	98.837	ENSMAMG00000003099	-	83	98.837	Mastacembelus_armatus
ENSCVAG00000002404	-	68	66.667	ENSMAMG00000015002	-	79	66.667	Mastacembelus_armatus
ENSCVAG00000002404	-	91	95.536	ENSMZEG00005005707	-	88	95.536	Maylandia_zebra
ENSCVAG00000002404	-	66	88.889	ENSMICG00000034959	SREK1	85	85.882	Microcebus_murinus
ENSCVAG00000002404	-	67	64.634	ENSMMOG00000008877	-	81	64.634	Mola_mola
ENSCVAG00000002404	-	68	66.667	ENSMMOG00000016751	-	78	67.470	Mola_mola
ENSCVAG00000002404	-	72	64.045	ENSMALG00000016608	srsf11	91	64.045	Monopterus_albus
ENSCVAG00000002404	-	71	96.552	ENSMALG00000017086	srek1	98	96.552	Monopterus_albus
ENSCVAG00000002404	-	70	70.930	MGP_CAROLIEiJ_G0025767	Srsf11	86	70.930	Mus_caroli
ENSCVAG00000002404	-	70	70.930	ENSMUSG00000055436	Srsf11	85	70.930	Mus_musculus
ENSCVAG00000002404	-	70	70.930	MGP_PahariEiJ_G0027217	Srsf11	86	70.930	Mus_pahari
ENSCVAG00000002404	-	70	70.930	MGP_SPRETEiJ_G0026719	Srsf11	86	70.930	Mus_spretus
ENSCVAG00000002404	-	95	76.068	ENSNGAG00000014631	-	90	74.380	Nannospalax_galili
ENSCVAG00000002404	-	98	95.868	ENSNBRG00000010656	-	90	95.868	Neolamprologus_brichardi
ENSCVAG00000002404	-	74	62.637	ENSNBRG00000020213	-	96	62.637	Neolamprologus_brichardi
ENSCVAG00000002404	-	66	87.654	ENSNLEG00000003827	SREK1	85	84.706	Nomascus_leucogenys
ENSCVAG00000002404	-	95	74.359	ENSODEG00000016218	-	83	87.059	Octodon_degus
ENSCVAG00000002404	-	68	66.667	ENSORLG00000030366	-	75	66.667	Oryzias_latipes
ENSCVAG00000002404	-	62	97.368	ENSORLG00000002711	-	63	97.368	Oryzias_latipes
ENSCVAG00000002404	-	95	82.906	ENSORLG00020012815	-	91	82.787	Oryzias_latipes_hni
ENSCVAG00000002404	-	68	66.667	ENSORLG00020009393	-	75	66.667	Oryzias_latipes_hni
ENSCVAG00000002404	-	68	66.667	ENSORLG00015009374	-	75	66.667	Oryzias_latipes_hsok
ENSCVAG00000002404	-	100	82.114	ENSORLG00015020455	-	95	82.114	Oryzias_latipes_hsok
ENSCVAG00000002404	-	95	73.504	ENSPPAG00000031605	SREK1	78	84.706	Pan_paniscus
ENSCVAG00000002404	-	66	88.889	ENSPPRG00000024617	SREK1	85	85.882	Panthera_pardus
ENSCVAG00000002404	-	66	88.889	ENSPTIG00000006608	SREK1	85	85.882	Panthera_tigris_altaica
ENSCVAG00000002404	-	95	73.504	ENSPTRG00000016936	SREK1	85	84.706	Pan_troglodytes
ENSCVAG00000002404	-	95	73.504	ENSPANG00000008953	SREK1	85	84.706	Papio_anubis
ENSCVAG00000002404	-	74	61.538	ENSPKIG00000021576	-	96	61.538	Paramormyrops_kingsleyae
ENSCVAG00000002404	-	89	75.229	ENSPMGG00000017029	-	95	75.229	Periophthalmus_magnuspinnatus
ENSCVAG00000002404	-	77	58.947	ENSPMGG00000000954	-	90	58.947	Periophthalmus_magnuspinnatus
ENSCVAG00000002404	-	70	63.953	ENSPMGG00000005045	-	75	63.953	Periophthalmus_magnuspinnatus
ENSCVAG00000002404	-	85	55.652	ENSPLAG00000009484	-	79	55.652	Poecilia_latipinna
ENSCVAG00000002404	-	98	82.787	ENSPLAG00000014609	-	88	82.787	Poecilia_latipinna
ENSCVAG00000002404	-	98	82.787	ENSPLAG00000008818	-	88	82.787	Poecilia_latipinna
ENSCVAG00000002404	-	98	82.787	ENSPMEG00000006607	-	88	82.787	Poecilia_mexicana
ENSCVAG00000002404	-	85	55.652	ENSPMEG00000023453	-	79	55.652	Poecilia_mexicana
ENSCVAG00000002404	-	98	82.787	ENSPMEG00000006824	-	88	82.787	Poecilia_mexicana
ENSCVAG00000002404	-	70	65.116	ENSPMEG00000018837	srsf11	70	65.116	Poecilia_mexicana
ENSCVAG00000002404	-	100	85.600	ENSPREG00000019922	-	100	85.600	Poecilia_reticulata
ENSCVAG00000002404	-	95	74.359	ENSPCOG00000026230	SREK1	85	85.882	Propithecus_coquereli
ENSCVAG00000002404	-	98	95.041	ENSPNYG00000007178	-	90	95.041	Pundamilia_nyererei
ENSCVAG00000002404	-	69	68.235	ENSRBIG00000042971	SRSF11	68	67.416	Rhinopithecus_bieti
ENSCVAG00000002404	-	95	73.504	ENSRBIG00000033818	SREK1	85	84.706	Rhinopithecus_bieti
ENSCVAG00000002404	-	66	87.654	ENSRROG00000017210	SREK1	85	84.706	Rhinopithecus_roxellana
ENSCVAG00000002404	-	69	68.235	ENSSBOG00000033461	SRSF11	68	67.416	Saimiri_boliviensis_boliviensis
ENSCVAG00000002404	-	98	71.901	ENSSBOG00000031230	SREK1	85	84.706	Saimiri_boliviensis_boliviensis
ENSCVAG00000002404	-	63	67.949	ENSSFOG00015016086	-	71	67.949	Scleropages_formosus
ENSCVAG00000002404	-	71	96.552	ENSSDUG00000010395	-	86	96.552	Seriola_dumerili
ENSCVAG00000002404	-	68	66.667	ENSSLDG00000012105	-	78	66.667	Seriola_lalandi_dorsalis
ENSCVAG00000002404	-	71	96.552	ENSSLDG00000016285	-	86	96.552	Seriola_lalandi_dorsalis
ENSCVAG00000002404	-	67	66.265	ENSSLDG00000015477	-	85	66.265	Seriola_lalandi_dorsalis
ENSCVAG00000002404	-	66	67.901	ENSSPAG00000016483	-	65	67.901	Stegastes_partitus
ENSCVAG00000002404	-	70	95.349	ENSSPAG00000022310	-	87	95.349	Stegastes_partitus
ENSCVAG00000002404	-	100	78.906	ENSTRUG00000022058	-	100	78.906	Takifugu_rubripes
ENSCVAG00000002404	-	68	69.048	ENSUAMG00000008403	-	68	67.416	Ursus_americanus
ENSCVAG00000002404	-	66	88.889	ENSUAMG00000022662	-	78	85.882	Ursus_americanus
ENSCVAG00000002404	-	95	74.359	ENSVVUG00000005888	-	85	85.882	Vulpes_vulpes
ENSCVAG00000002404	-	70	66.279	ENSXCOG00000003220	-	74	66.279	Xiphophorus_couchianus
ENSCVAG00000002404	-	98	83.740	ENSXCOG00000017792	-	94	83.740	Xiphophorus_couchianus
ENSCVAG00000002404	-	68	66.667	ENSXCOG00000015127	-	90	66.667	Xiphophorus_couchianus
ENSCVAG00000002404	-	85	55.652	ENSXMAG00000019180	SRSF11	76	55.652	Xiphophorus_maculatus
ENSCVAG00000002404	-	100	84.000	ENSXMAG00000028210	-	100	84.000	Xiphophorus_maculatus