EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002411 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4595 bases
Position: chrKL652897.1:636256-640850
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001418	RRM_1	PF00076.22	7.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013435	-	606	-	ENSCVAP00000001418	201 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002411	srek1	84	77.966	ENSG00000153914	SREK1	97	64.865	Homo_sapiens
ENSCVAG00000002411	srek1	86	88.398	ENSACIG00000015041	srek1	96	88.398	Amphilophus_citrinellus
ENSCVAG00000002411	srek1	89	75.269	ENSANAG00000031358	SREK1	92	77.222	Aotus_nancymaae
ENSCVAG00000002411	srek1	88	89.011	ENSACLG00000026754	srek1	62	89.011	Astatotilapia_calliptera
ENSCVAG00000002411	srek1	94	72.959	ENSCJAG00000015950	SREK1	92	77.222	Callithrix_jacchus
ENSCVAG00000002411	srek1	84	73.743	ENSCAFG00020019448	-	90	73.743	Canis_lupus_dingo
ENSCVAG00000002411	srek1	84	78.531	ENSTSYG00000036957	SREK1	92	76.503	Carlito_syrichta
ENSCVAG00000002411	srek1	88	75.543	ENSCATG00000031482	SREK1	92	77.222	Cercocebus_atys
ENSCVAG00000002411	srek1	71	83.448	ENSCPBG00000026866	SREK1	53	77.401	Chrysemys_picta_bellii
ENSCVAG00000002411	srek1	88	75.543	ENSCANG00000030421	SREK1	92	77.222	Colobus_angolensis_palliatus
ENSCVAG00000002411	srek1	86	77.222	ENSDORG00000023425	-	92	77.222	Dipodomys_ordii
ENSCVAG00000002411	srek1	86	75.956	ENSEASG00005006829	-	92	75.956	Equus_asinus_asinus
ENSCVAG00000002411	srek1	86	75.956	ENSECAG00000036994	-	92	75.956	Equus_caballus
ENSCVAG00000002411	srek1	88	75.543	ENSGGOG00000004737	SREK1	92	77.222	Gorilla_gorilla
ENSCVAG00000002411	srek1	88	89.011	ENSHBUG00000007057	srek1	99	89.011	Haplochromis_burtoni
ENSCVAG00000002411	srek1	99	74.000	ENSHCOG00000017240	SREK1	53	83.333	Hippocampus_comes
ENSCVAG00000002411	srek1	86	77.222	ENSJJAG00000000214	-	92	77.222	Jaculus_jaculus
ENSCVAG00000002411	srek1	91	85.165	ENSLBEG00000022980	srek1	95	85.165	Labrus_bergylta
ENSCVAG00000002411	srek1	88	75.543	ENSMFAG00000039823	SREK1	92	77.222	Macaca_fascicularis
ENSCVAG00000002411	srek1	88	75.543	ENSMNEG00000030723	SREK1	92	77.222	Macaca_nemestrina
ENSCVAG00000002411	srek1	88	75.543	ENSMLEG00000039078	SREK1	92	77.222	Mandrillus_leucophaeus
ENSCVAG00000002411	srek1	88	89.011	ENSMZEG00005005719	srek1	99	89.011	Maylandia_zebra
ENSCVAG00000002411	srek1	63	75.000	ENSMGAG00000002047	SREK1	68	65.896	Meleagris_gallopavo
ENSCVAG00000002411	srek1	84	76.111	ENSMAUG00000010066	-	57	76.667	Mesocricetus_auratus
ENSCVAG00000002411	srek1	86	77.222	ENSMICG00000034959	SREK1	92	77.222	Microcebus_murinus
ENSCVAG00000002411	srek1	84	76.111	ENSMOCG00000001536	-	56	76.667	Microtus_ochrogaster
ENSCVAG00000002411	srek1	86	89.535	ENSMMOG00000008409	srek1	91	89.535	Mola_mola
ENSCVAG00000002411	srek1	86	75.410	ENSNGAG00000017527	-	92	75.410	Nannospalax_galili
ENSCVAG00000002411	srek1	88	87.500	ENSNBRG00000010718	srek1	99	87.500	Neolamprologus_brichardi
ENSCVAG00000002411	srek1	85	91.908	ENSONIG00000011080	srek1	50	90.857	Oreochromis_niloticus
ENSCVAG00000002411	srek1	86	86.813	ENSORLG00015020471	srek1	94	86.813	Oryzias_latipes_hsok
ENSCVAG00000002411	srek1	88	75.543	ENSPPAG00000031605	SREK1	92	77.222	Pan_paniscus
ENSCVAG00000002411	srek1	88	75.543	ENSPTRG00000016936	SREK1	92	77.222	Pan_troglodytes
ENSCVAG00000002411	srek1	88	75.543	ENSPANG00000008953	SREK1	92	77.222	Papio_anubis
ENSCVAG00000002411	srek1	86	85.549	ENSPMGG00000017031	srek1	99	85.549	Periophthalmus_magnuspinnatus
ENSCVAG00000002411	srek1	84	76.111	ENSPEMG00000024051	-	58	76.667	Peromyscus_maniculatus_bairdii
ENSCVAG00000002411	srek1	86	77.222	ENSPCIG00000017750	-	92	77.222	Phascolarctos_cinereus
ENSCVAG00000002411	srek1	86	92.529	ENSPLAG00000008827	srek1	99	92.529	Poecilia_latipinna
ENSCVAG00000002411	srek1	83	92.857	ENSPREG00000019912	srek1	98	92.857	Poecilia_reticulata
ENSCVAG00000002411	srek1	86	77.222	ENSPCOG00000026230	SREK1	92	77.222	Propithecus_coquereli
ENSCVAG00000002411	srek1	84	77.966	ENSRBIG00000033818	SREK1	93	75.135	Rhinopithecus_bieti
ENSCVAG00000002411	srek1	88	75.543	ENSRROG00000017210	SREK1	92	77.222	Rhinopithecus_roxellana
ENSCVAG00000002411	srek1	86	77.222	ENSSBOG00000031230	SREK1	92	77.222	Saimiri_boliviensis_boliviensis
ENSCVAG00000002411	srek1	86	75.556	ENSSPUG00000016553	SREK1	58	75.556	Sphenodon_punctatus
ENSCVAG00000002411	srek1	86	89.655	ENSSPAG00000022298	srek1	98	89.655	Stegastes_partitus
ENSCVAG00000002411	srek1	86	86.628	ENSTRUG00000002960	srek1	96	86.628	Takifugu_rubripes
ENSCVAG00000002411	srek1	86	77.222	ENSUAMG00000022661	-	92	77.222	Ursus_americanus
ENSCVAG00000002411	srek1	72	83.108	ENSVVUG00000005890	-	90	73.743	Vulpes_vulpes
ENSCVAG00000002411	srek1	89	90.710	ENSXCOG00000017793	srek1	100	90.710	Xiphophorus_couchianus