EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000002426 (Gene tree)
Gene ID: 107081622
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 22372 bases
Position: chrKL652538.1:46492-68863
Accession: 107081622
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	1	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	2	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	3	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	4	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	5	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	6	7
ENSCVAP00000001393	PUF	PF00806.19	1.4e-71	7	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	1	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	2	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	3	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	4	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	5	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	6	7
ENSCVAP00000020784	PUF	PF00806.19	5.6e-70	7	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	1	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	2	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	3	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	4	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	5	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	6	7
ENSCVAP00000001411	PUF	PF00806.19	3.5e-68	7	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	1	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	2	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	3	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	4	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	5	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	6	7
ENSCVAP00000020787	PUF	PF00806.19	5.7e-68	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013465	-	6315	XM_015369772	ENSCVAP00000001411	1211 (aa)	XP_015225258	UPI0007428566
ENSCVAT00000013448	-	6390	-	ENSCVAP00000020787	1292 (aa)	-	-
ENSCVAT00000013453	-	6318	-	ENSCVAP00000020784	1268 (aa)	-	-
ENSCVAT00000013484	-	3216	-	ENSCVAP00000001393	1071 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000002426	pum2	94	62.864	ENSCVAG00000007043	pum1	95	65.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002426	pum2	100	76.077	ENSG00000055917	PUM2	100	79.412	Homo_sapiens
ENSCVAG00000002426	pum2	90	98.778	ENSAPOG00000015756	pum2	99	98.778	Acanthochromis_polyacanthus
ENSCVAG00000002426	pum2	100	75.251	ENSAMEG00000002823	PUM2	100	73.869	Ailuropoda_melanoleuca
ENSCVAG00000002426	pum2	91	96.429	ENSACIG00000010646	pum2	96	98.950	Amphilophus_citrinellus
ENSCVAG00000002426	pum2	99	91.652	ENSAOCG00000016619	pum2	99	93.739	Amphiprion_ocellaris
ENSCVAG00000002426	pum2	100	94.728	ENSAPEG00000019924	pum2	100	95.058	Amphiprion_percula
ENSCVAG00000002426	pum2	100	93.575	ENSATEG00000015030	pum2	100	94.202	Anabas_testudineus
ENSCVAG00000002426	pum2	100	74.265	ENSAPLG00000010496	PUM2	100	70.740	Anas_platyrhynchos
ENSCVAG00000002426	pum2	100	74.839	ENSACAG00000010491	PUM2	100	72.710	Anolis_carolinensis
ENSCVAG00000002426	pum2	100	76.077	ENSANAG00000021807	PUM2	100	73.801	Aotus_nancymaae
ENSCVAG00000002426	pum2	100	93.498	ENSACLG00000022532	pum2	100	94.403	Astatotilapia_calliptera
ENSCVAG00000002426	pum2	100	75.458	ENSBTAG00000011155	PUM2	100	78.516	Bos_taurus
ENSCVAG00000002426	pum2	100	75.985	ENSCJAG00000007450	PUM2	100	73.708	Callithrix_jacchus
ENSCVAG00000002426	pum2	100	75.275	ENSCAFG00000003839	PUM2	100	73.567	Canis_familiaris
ENSCVAG00000002426	pum2	100	74.359	ENSCAFG00020025689	PUM2	100	72.643	Canis_lupus_dingo
ENSCVAG00000002426	pum2	100	75.458	ENSCHIG00000022180	PUM2	100	73.567	Capra_hircus
ENSCVAG00000002426	pum2	100	74.977	ENSTSYG00000014463	PUM2	100	73.937	Carlito_syrichta
ENSCVAG00000002426	pum2	99	87.726	ENSCAPG00000016888	PUM2	99	85.775	Cavia_aperea
ENSCVAG00000002426	pum2	96	85.965	ENSCPOG00000031996	PUM2	100	73.573	Cavia_porcellus
ENSCVAG00000002426	pum2	100	76.077	ENSCCAG00000037035	PUM2	100	73.801	Cebus_capucinus
ENSCVAG00000002426	pum2	100	76.169	ENSCATG00000043826	PUM2	100	73.893	Cercocebus_atys
ENSCVAG00000002426	pum2	100	75.985	ENSCLAG00000006048	PUM2	100	73.985	Chinchilla_lanigera
ENSCVAG00000002426	pum2	100	76.169	ENSCSAG00000008087	PUM2	100	73.893	Chlorocebus_sabaeus
ENSCVAG00000002426	pum2	79	76.316	ENSCHOG00000004575	PUM2	79	77.778	Choloepus_hoffmanni
ENSCVAG00000002426	pum2	100	76.260	ENSCANG00000032797	PUM2	100	73.985	Colobus_angolensis_palliatus
ENSCVAG00000002426	pum2	96	85.965	ENSCGRG00001025023	Pum2	100	73.432	Cricetulus_griseus_chok1gshd
ENSCVAG00000002426	pum2	96	85.965	ENSCGRG00000001580	Pum2	100	73.616	Cricetulus_griseus_crigri
ENSCVAG00000002426	pum2	100	91.591	ENSCSEG00000020899	pum2	100	91.838	Cynoglossus_semilaevis
ENSCVAG00000002426	pum2	100	86.599	ENSDARG00000061040	pum2	100	85.846	Danio_rerio
ENSCVAG00000002426	pum2	100	72.578	ENSDNOG00000006733	PUM2	100	70.604	Dasypus_novemcinctus
ENSCVAG00000002426	pum2	100	71.743	ENSDORG00000011453	Pum2	100	69.493	Dipodomys_ordii
ENSCVAG00000002426	pum2	86	89.680	ENSETEG00000017683	PUM2	79	90.391	Echinops_telfairi
ENSCVAG00000002426	pum2	96	60.000	ENSEBUG00000004435	pum2	96	58.374	Eptatretus_burgeri
ENSCVAG00000002426	pum2	70	61.347	ENSEBUG00000014828	pum2	93	59.551	Eptatretus_burgeri
ENSCVAG00000002426	pum2	100	75.183	ENSEASG00005009429	PUM2	100	73.475	Equus_asinus_asinus
ENSCVAG00000002426	pum2	100	75.183	ENSECAG00000021930	PUM2	100	78.207	Equus_caballus
ENSCVAG00000002426	pum2	76	73.585	ENSEEUG00000003224	-	74	73.585	Erinaceus_europaeus
ENSCVAG00000002426	pum2	100	88.144	ENSELUG00000014997	pum2	100	88.307	Esox_lucius
ENSCVAG00000002426	pum2	100	75.183	ENSFCAG00000027520	PUM2	100	73.475	Felis_catus
ENSCVAG00000002426	pum2	100	74.587	ENSFALG00000001759	PUM2	100	73.407	Ficedula_albicollis
ENSCVAG00000002426	pum2	100	75.389	ENSFDAG00000019685	PUM2	100	72.861	Fukomys_damarensis
ENSCVAG00000002426	pum2	100	96.151	ENSFHEG00000021596	pum2	100	94.364	Fundulus_heteroclitus
ENSCVAG00000002426	pum2	100	84.665	ENSGMOG00000006903	pum2	100	86.481	Gadus_morhua
ENSCVAG00000002426	pum2	87	90.954	ENSGALG00000016481	PUM2	100	72.988	Gallus_gallus
ENSCVAG00000002426	pum2	100	96.626	ENSGAFG00000013691	pum2	100	96.626	Gambusia_affinis
ENSCVAG00000002426	pum2	100	89.556	ENSGACG00000009670	pum2	100	91.240	Gasterosteus_aculeatus
ENSCVAG00000002426	pum2	100	74.679	ENSGAGG00000020698	PUM2	100	73.013	Gopherus_agassizii
ENSCVAG00000002426	pum2	100	76.077	ENSGGOG00000011374	PUM2	100	73.801	Gorilla_gorilla
ENSCVAG00000002426	pum2	95	94.937	ENSHBUG00000016453	pum2	100	85.487	Haplochromis_burtoni
ENSCVAG00000002426	pum2	96	85.088	ENSHGLG00000007892	PUM2	100	73.155	Heterocephalus_glaber_female
ENSCVAG00000002426	pum2	100	75.046	ENSHGLG00100015510	PUM2	100	73.825	Heterocephalus_glaber_male
ENSCVAG00000002426	pum2	100	90.833	ENSHCOG00000010119	pum2	100	92.521	Hippocampus_comes
ENSCVAG00000002426	pum2	100	75.666	ENSSTOG00000006262	PUM2	100	74.214	Ictidomys_tridecemlineatus
ENSCVAG00000002426	pum2	100	75.868	ENSJJAG00000020969	Pum2	100	74.470	Jaculus_jaculus
ENSCVAG00000002426	pum2	100	93.092	ENSKMAG00000017216	pum2	100	93.586	Kryptolebias_marmoratus
ENSCVAG00000002426	pum2	100	94.142	ENSLBEG00000020488	pum2	100	94.142	Labrus_bergylta
ENSCVAG00000002426	pum2	100	75.023	ENSLACG00000008723	PUM2	100	73.077	Latimeria_chalumnae
ENSCVAG00000002426	pum2	100	78.624	ENSLOCG00000017196	pum2	100	75.638	Lepisosteus_oculatus
ENSCVAG00000002426	pum2	100	74.795	ENSLAFG00000009278	PUM2	100	72.928	Loxodonta_africana
ENSCVAG00000002426	pum2	100	76.169	ENSMFAG00000000492	PUM2	100	73.893	Macaca_fascicularis
ENSCVAG00000002426	pum2	100	76.169	ENSMMUG00000023181	PUM2	100	73.893	Macaca_mulatta
ENSCVAG00000002426	pum2	100	76.169	ENSMNEG00000039659	PUM2	100	73.893	Macaca_nemestrina
ENSCVAG00000002426	pum2	100	76.169	ENSMLEG00000039243	PUM2	100	73.893	Mandrillus_leucophaeus
ENSCVAG00000002426	pum2	100	94.307	ENSMAMG00000006121	pum2	100	93.812	Mastacembelus_armatus
ENSCVAG00000002426	pum2	100	93.498	ENSMZEG00005000791	pum2	100	94.403	Maylandia_zebra
ENSCVAG00000002426	pum2	100	74.380	ENSMGAG00000014040	PUM2	100	72.988	Meleagris_gallopavo
ENSCVAG00000002426	pum2	100	75.663	ENSMAUG00000000311	Pum2	100	73.708	Mesocricetus_auratus
ENSCVAG00000002426	pum2	100	76.077	ENSMICG00000011647	PUM2	100	73.801	Microcebus_murinus
ENSCVAG00000002426	pum2	100	75.389	ENSMOCG00000013663	Pum2	100	73.845	Microtus_ochrogaster
ENSCVAG00000002426	pum2	100	89.062	ENSMMOG00000002975	pum2	100	91.187	Mola_mola
ENSCVAG00000002426	pum2	100	72.884	ENSMODG00000009811	PUM2	100	71.376	Monodelphis_domestica
ENSCVAG00000002426	pum2	100	75.641	MGP_CAROLIEiJ_G0017603	Pum2	99	77.011	Mus_caroli
ENSCVAG00000002426	pum2	96	85.746	ENSMUSG00000020594	Pum2	98	76.628	Mus_musculus
ENSCVAG00000002426	pum2	100	75.710	MGP_PahariEiJ_G0029361	Pum2	99	77.011	Mus_pahari
ENSCVAG00000002426	pum2	96	85.746	MGP_SPRETEiJ_G0018447	Pum2	99	76.628	Mus_spretus
ENSCVAG00000002426	pum2	100	75.366	ENSMPUG00000013734	PUM2	100	73.660	Mustela_putorius_furo
ENSCVAG00000002426	pum2	100	75.000	ENSMLUG00000007362	PUM2	100	73.290	Myotis_lucifugus
ENSCVAG00000002426	pum2	100	75.572	ENSNGAG00000016665	-	100	74.214	Nannospalax_galili
ENSCVAG00000002426	pum2	99	49.407	ENSNGAG00000016239	-	99	50.785	Nannospalax_galili
ENSCVAG00000002426	pum2	90	91.474	ENSNBRG00000020737	pum2	99	91.349	Neolamprologus_brichardi
ENSCVAG00000002426	pum2	87	91.505	ENSNLEG00000002509	PUM2	100	73.801	Nomascus_leucogenys
ENSCVAG00000002426	pum2	94	71.210	ENSMEUG00000016567	PUM2	100	66.667	Notamacropus_eugenii
ENSCVAG00000002426	pum2	77	68.467	ENSOPRG00000001963	PUM2	93	60.474	Ochotona_princeps
ENSCVAG00000002426	pum2	96	86.404	ENSODEG00000007823	PUM2	100	73.937	Octodon_degus
ENSCVAG00000002426	pum2	100	93.228	ENSONIG00000006119	pum2	100	94.542	Oreochromis_niloticus
ENSCVAG00000002426	pum2	100	75.527	ENSOCUG00000017908	PUM2	100	73.432	Oryctolagus_cuniculus
ENSCVAG00000002426	pum2	100	90.602	ENSORLG00000012611	pum2	100	91.261	Oryzias_latipes
ENSCVAG00000002426	pum2	100	90.684	ENSORLG00020014452	pum2	100	91.344	Oryzias_latipes_hni
ENSCVAG00000002426	pum2	100	90.684	ENSORLG00015009427	pum2	100	91.344	Oryzias_latipes_hsok
ENSCVAG00000002426	pum2	100	75.320	ENSOARG00000017236	PUM2	100	73.432	Ovis_aries
ENSCVAG00000002426	pum2	100	76.077	ENSPPAG00000023095	PUM2	100	73.801	Pan_paniscus
ENSCVAG00000002426	pum2	100	75.183	ENSPPRG00000021443	PUM2	100	73.475	Panthera_pardus
ENSCVAG00000002426	pum2	100	75.183	ENSPTIG00000018982	PUM2	100	73.475	Panthera_tigris_altaica
ENSCVAG00000002426	pum2	100	76.077	ENSPTRG00000011692	PUM2	100	73.801	Pan_troglodytes
ENSCVAG00000002426	pum2	100	66.166	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSCVAG00000002426	pum2	100	74.404	ENSPSIG00000011626	PUM2	99	71.346	Pelodiscus_sinensis
ENSCVAG00000002426	pum2	100	75.023	ENSPEMG00000008357	Pum2	100	73.432	Peromyscus_maniculatus_bairdii
ENSCVAG00000002426	pum2	100	62.692	ENSPMAG00000007038	pum2	100	59.548	Petromyzon_marinus
ENSCVAG00000002426	pum2	90	70.968	ENSPCIG00000022139	PUM2	100	70.055	Phascolarctos_cinereus
ENSCVAG00000002426	pum2	100	96.872	ENSPFOG00000019208	pum2	100	96.872	Poecilia_formosa
ENSCVAG00000002426	pum2	100	96.955	ENSPLAG00000001826	pum2	100	96.955	Poecilia_latipinna
ENSCVAG00000002426	pum2	100	96.872	ENSPMEG00000015766	pum2	100	96.872	Poecilia_mexicana
ENSCVAG00000002426	pum2	90	84.355	ENSPREG00000006905	pum2	100	86.436	Poecilia_reticulata
ENSCVAG00000002426	pum2	100	76.260	ENSPPYG00000012617	PUM2	100	73.985	Pongo_abelii
ENSCVAG00000002426	pum2	70	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSCVAG00000002426	pum2	99	75.811	ENSPCOG00000019636	PUM2	100	73.832	Propithecus_coquereli
ENSCVAG00000002426	pum2	98	69.916	ENSPVAG00000002920	PUM2	100	68.451	Pteropus_vampyrus
ENSCVAG00000002426	pum2	100	93.416	ENSPNYG00000022901	pum2	100	94.321	Pundamilia_nyererei
ENSCVAG00000002426	pum2	98	87.755	ENSPNAG00000008025	pum2	99	87.670	Pygocentrus_nattereri
ENSCVAG00000002426	pum2	100	74.152	ENSRNOG00000006180	Pum2	100	73.155	Rattus_norvegicus
ENSCVAG00000002426	pum2	100	76.260	ENSRBIG00000044880	PUM2	100	73.985	Rhinopithecus_bieti
ENSCVAG00000002426	pum2	100	76.099	ENSSBOG00000022007	PUM2	100	73.641	Saimiri_boliviensis_boliviensis
ENSCVAG00000002426	pum2	90	71.226	ENSSHAG00000002778	PUM2	100	69.510	Sarcophilus_harrisii
ENSCVAG00000002426	pum2	91	75.378	ENSSFOG00015003476	pum2	99	76.181	Scleropages_formosus
ENSCVAG00000002426	pum2	100	92.440	ENSSMAG00000018236	pum2	100	92.769	Scophthalmus_maximus
ENSCVAG00000002426	pum2	92	90.743	ENSSDUG00000001800	pum2	99	94.322	Seriola_dumerili
ENSCVAG00000002426	pum2	100	93.663	ENSSLDG00000000981	pum2	100	94.156	Seriola_lalandi_dorsalis
ENSCVAG00000002426	pum2	96	66.408	ENSSARG00000010992	PUM2	86	66.067	Sorex_araneus
ENSCVAG00000002426	pum2	99	74.861	ENSSPUG00000017012	PUM2	99	72.923	Sphenodon_punctatus
ENSCVAG00000002426	pum2	100	94.152	ENSSPAG00000022948	pum2	100	94.975	Stegastes_partitus
ENSCVAG00000002426	pum2	100	74.885	ENSSSCG00000008600	PUM2	100	78.793	Sus_scrofa
ENSCVAG00000002426	pum2	100	74.495	ENSTGUG00000013149	PUM2	100	73.315	Taeniopygia_guttata
ENSCVAG00000002426	pum2	100	86.562	ENSTRUG00000018167	pum2	100	87.542	Takifugu_rubripes
ENSCVAG00000002426	pum2	100	89.601	ENSTNIG00000003116	pum2	100	90.704	Tetraodon_nigroviridis
ENSCVAG00000002426	pum2	78	88.683	ENSTBEG00000008729	PUM2	76	86.071	Tupaia_belangeri
ENSCVAG00000002426	pum2	100	74.954	ENSTTRG00000004887	PUM2	100	73.475	Tursiops_truncatus
ENSCVAG00000002426	pum2	72	79.034	ENSUAMG00000008120	PUM2	97	77.232	Ursus_americanus
ENSCVAG00000002426	pum2	100	75.366	ENSUMAG00000023198	PUM2	100	73.660	Ursus_maritimus
ENSCVAG00000002426	pum2	100	74.886	ENSVPAG00000005056	PUM2	100	73.728	Vicugna_pacos
ENSCVAG00000002426	pum2	100	75.366	ENSVVUG00000014829	PUM2	100	73.660	Vulpes_vulpes
ENSCVAG00000002426	pum2	100	71.258	ENSXETG00000008903	pum2	100	68.242	Xenopus_tropicalis
ENSCVAG00000002426	pum2	92	95.714	ENSXCOG00000002556	pum2	100	96.242	Xiphophorus_couchianus
ENSCVAG00000002426	pum2	100	96.790	ENSXMAG00000017682	pum2	100	96.790	Xiphophorus_maculatus