EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002427 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 22257 bases
Position: chrKL652677.1:1035445-1057701
Accession: 107087243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001426	ResIII	PF04851.15	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013443	-	4929	XM_015378704	ENSCVAP00000001426	1642 (aa)	XP_015234190	-
ENSCVAT00000013462	-	1479	-	ENSCVAP00000001408	492 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002427	chd2	99	71.000	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSCVAG00000002427	chd2	100	81.449	ENSAPOG00000008913	chd2	100	81.833	Acanthochromis_polyacanthus
ENSCVAG00000002427	chd2	68	70.904	ENSAMEG00000010805	-	99	71.138	Ailuropoda_melanoleuca
ENSCVAG00000002427	chd2	100	80.652	ENSAOCG00000016332	chd2	100	81.271	Amphiprion_ocellaris
ENSCVAG00000002427	chd2	100	81.528	ENSAPEG00000016676	chd2	100	81.968	Amphiprion_percula
ENSCVAG00000002427	chd2	100	81.394	ENSATEG00000005246	chd2	97	93.000	Anabas_testudineus
ENSCVAG00000002427	chd2	100	64.220	ENSAPLG00000011141	-	100	64.852	Anas_platyrhynchos
ENSCVAG00000002427	chd2	98	61.400	ENSACAG00000000088	-	96	62.486	Anolis_carolinensis
ENSCVAG00000002427	chd2	99	71.071	ENSANAG00000024017	-	100	64.305	Aotus_nancymaae
ENSCVAG00000002427	chd2	98	79.780	ENSACLG00000021370	chd2	98	92.941	Astatotilapia_calliptera
ENSCVAG00000002427	chd2	99	71.000	ENSCJAG00000020444	-	100	64.412	Callithrix_jacchus
ENSCVAG00000002427	chd2	93	72.012	ENSCAFG00000010998	CHD2	100	71.053	Canis_familiaris
ENSCVAG00000002427	chd2	99	63.562	ENSCHIG00000022261	-	96	64.049	Capra_hircus
ENSCVAG00000002427	chd2	100	63.107	ENSTSYG00000003272	-	95	69.680	Carlito_syrichta
ENSCVAG00000002427	chd2	92	73.913	ENSCPOG00000005800	-	99	70.373	Cavia_porcellus
ENSCVAG00000002427	chd2	99	71.071	ENSCCAG00000035304	-	100	64.305	Cebus_capucinus
ENSCVAG00000002427	chd2	99	70.929	ENSCATG00000031069	-	100	64.213	Cercocebus_atys
ENSCVAG00000002427	chd2	100	62.359	ENSCLAG00000016269	-	100	63.412	Chinchilla_lanigera
ENSCVAG00000002427	chd2	99	71.000	ENSCSAG00000017007	-	100	64.267	Chlorocebus_sabaeus
ENSCVAG00000002427	chd2	72	78.333	ENSCHOG00000000608	-	76	78.463	Choloepus_hoffmanni
ENSCVAG00000002427	chd2	81	73.651	ENSCPBG00000018049	-	95	78.520	Chrysemys_picta_bellii
ENSCVAG00000002427	chd2	76	50.257	ENSCSAVG00000007580	-	94	55.579	Ciona_savignyi
ENSCVAG00000002427	chd2	99	71.000	ENSCANG00000038126	-	100	64.213	Colobus_angolensis_palliatus
ENSCVAG00000002427	chd2	99	71.571	ENSCGRG00001006649	Chd2	100	64.267	Cricetulus_griseus_chok1gshd
ENSCVAG00000002427	chd2	99	71.571	ENSCGRG00000018154	Chd2	100	64.267	Cricetulus_griseus_crigri
ENSCVAG00000002427	chd2	98	72.158	ENSCSEG00000003646	chd2	96	89.908	Cynoglossus_semilaevis
ENSCVAG00000002427	chd2	100	73.789	ENSDARG00000060687	chd2	100	75.687	Danio_rerio
ENSCVAG00000002427	chd2	99	63.342	ENSDNOG00000009796	-	100	64.481	Dasypus_novemcinctus
ENSCVAG00000002427	chd2	63	66.242	ENSEBUG00000014994	chd2	89	66.035	Eptatretus_burgeri
ENSCVAG00000002427	chd2	99	63.622	ENSEASG00005015526	-	97	77.551	Equus_asinus_asinus
ENSCVAG00000002427	chd2	90	96.552	ENSELUG00000017981	chd2	97	96.552	Esox_lucius
ENSCVAG00000002427	chd2	96	72.857	ENSFALG00000010369	-	100	64.747	Ficedula_albicollis
ENSCVAG00000002427	chd2	100	62.715	ENSFDAG00000020651	-	100	64.071	Fukomys_damarensis
ENSCVAG00000002427	chd2	95	84.000	ENSFHEG00000002119	chd2	100	91.000	Fundulus_heteroclitus
ENSCVAG00000002427	chd2	94	74.216	ENSGMOG00000002890	chd2	99	74.332	Gadus_morhua
ENSCVAG00000002427	chd2	100	70.407	ENSGALG00000006949	CHD2	100	63.622	Gallus_gallus
ENSCVAG00000002427	chd2	96	90.909	ENSGAFG00000001905	chd2	98	92.523	Gambusia_affinis
ENSCVAG00000002427	chd2	94	77.133	ENSGACG00000013246	chd2	99	77.539	Gasterosteus_aculeatus
ENSCVAG00000002427	chd2	80	75.788	ENSGAGG00000013176	-	98	79.061	Gopherus_agassizii
ENSCVAG00000002427	chd2	99	69.764	ENSGGOG00000015677	CHD2	100	63.339	Gorilla_gorilla
ENSCVAG00000002427	chd2	100	81.893	ENSHBUG00000017947	chd2	98	92.941	Haplochromis_burtoni
ENSCVAG00000002427	chd2	100	62.393	ENSHGLG00000004435	CHD2	100	63.910	Heterocephalus_glaber_female
ENSCVAG00000002427	chd2	100	62.071	ENSHGLG00100016376	-	100	63.588	Heterocephalus_glaber_male
ENSCVAG00000002427	chd2	94	76.616	ENSHCOG00000008855	chd2	96	75.729	Hippocampus_comes
ENSCVAG00000002427	chd2	98	70.696	ENSIPUG00000000488	chd2	98	71.278	Ictalurus_punctatus
ENSCVAG00000002427	chd2	100	63.235	ENSSTOG00000001270	-	100	64.267	Ictidomys_tridecemlineatus
ENSCVAG00000002427	chd2	99	70.899	ENSJJAG00000000213	Chd2	100	63.925	Jaculus_jaculus
ENSCVAG00000002427	chd2	81	79.155	ENSKMAG00000015849	chd2	99	79.357	Kryptolebias_marmoratus
ENSCVAG00000002427	chd2	77	72.700	ENSLAFG00000016885	-	98	78.195	Loxodonta_africana
ENSCVAG00000002427	chd2	99	71.000	ENSMFAG00000033343	-	100	64.267	Macaca_fascicularis
ENSCVAG00000002427	chd2	99	71.000	ENSMMUG00000011782	-	100	64.267	Macaca_mulatta
ENSCVAG00000002427	chd2	99	70.685	ENSMNEG00000036875	-	100	64.037	Macaca_nemestrina
ENSCVAG00000002427	chd2	99	71.000	ENSMLEG00000035026	-	100	64.267	Mandrillus_leucophaeus
ENSCVAG00000002427	chd2	100	81.240	ENSMAMG00000009082	chd2	98	87.059	Mastacembelus_armatus
ENSCVAG00000002427	chd2	98	79.780	ENSMZEG00005021333	chd2	98	92.941	Maylandia_zebra
ENSCVAG00000002427	chd2	99	71.035	ENSMGAG00000008966	-	97	63.886	Meleagris_gallopavo
ENSCVAG00000002427	chd2	92	69.957	ENSMICG00000000332	-	96	64.620	Microcebus_murinus
ENSCVAG00000002427	chd2	100	62.957	ENSMOCG00000015124	Chd2	100	64.056	Microtus_ochrogaster
ENSCVAG00000002427	chd2	100	71.714	ENSMODG00000013158	-	100	64.485	Monodelphis_domestica
ENSCVAG00000002427	chd2	98	77.552	ENSMALG00000007755	chd2	91	79.177	Monopterus_albus
ENSCVAG00000002427	chd2	99	71.071	MGP_CAROLIEiJ_G0029860	Chd2	100	64.125	Mus_caroli
ENSCVAG00000002427	chd2	99	71.612	ENSMUSG00000078671	Chd2	100	63.929	Mus_musculus
ENSCVAG00000002427	chd2	99	71.265	MGP_PahariEiJ_G0013082	Chd2	100	64.017	Mus_pahari
ENSCVAG00000002427	chd2	99	71.214	MGP_SPRETEiJ_G0030962	Chd2	100	63.929	Mus_spretus
ENSCVAG00000002427	chd2	100	63.430	ENSMPUG00000017577	-	100	64.355	Mustela_putorius_furo
ENSCVAG00000002427	chd2	99	70.626	ENSMLUG00000009292	-	96	64.489	Myotis_lucifugus
ENSCVAG00000002427	chd2	99	70.857	ENSNGAG00000010792	Chd2	100	64.017	Nannospalax_galili
ENSCVAG00000002427	chd2	98	79.503	ENSNBRG00000020591	chd2	97	92.941	Neolamprologus_brichardi
ENSCVAG00000002427	chd2	99	68.571	ENSNLEG00000012349	-	99	63.808	Nomascus_leucogenys
ENSCVAG00000002427	chd2	73	78.986	ENSMEUG00000001522	-	69	78.986	Notamacropus_eugenii
ENSCVAG00000002427	chd2	100	63.283	ENSODEG00000016028	-	100	63.955	Octodon_degus
ENSCVAG00000002427	chd2	100	82.113	ENSONIG00000015136	chd2	100	82.058	Oreochromis_niloticus
ENSCVAG00000002427	chd2	84	70.612	ENSOANG00000004385	-	99	70.553	Ornithorhynchus_anatinus
ENSCVAG00000002427	chd2	100	67.315	ENSOCUG00000001628	-	99	70.257	Oryctolagus_cuniculus
ENSCVAG00000002427	chd2	100	79.505	ENSORLG00000008403	chd2	98	83.399	Oryzias_latipes
ENSCVAG00000002427	chd2	100	79.923	ENSORLG00020004138	chd2	100	79.208	Oryzias_latipes_hni
ENSCVAG00000002427	chd2	100	87.072	ENSOMEG00000005831	chd2	100	85.942	Oryzias_melastigma
ENSCVAG00000002427	chd2	100	60.938	ENSOGAG00000010399	-	100	62.513	Otolemur_garnettii
ENSCVAG00000002427	chd2	100	63.376	ENSOARG00000010343	-	100	63.353	Ovis_aries
ENSCVAG00000002427	chd2	99	65.976	ENSPPAG00000030381	-	100	64.274	Pan_paniscus
ENSCVAG00000002427	chd2	99	71.000	ENSPTRG00000007478	CHD2	100	64.267	Pan_troglodytes
ENSCVAG00000002427	chd2	99	67.620	ENSPANG00000033355	-	100	61.720	Papio_anubis
ENSCVAG00000002427	chd2	98	77.137	ENSPKIG00000000495	chd2	100	73.249	Paramormyrops_kingsleyae
ENSCVAG00000002427	chd2	82	77.107	ENSPMGG00000009941	chd2	99	77.387	Periophthalmus_magnuspinnatus
ENSCVAG00000002427	chd2	100	63.113	ENSPEMG00000019507	Chd2	100	64.105	Peromyscus_maniculatus_bairdii
ENSCVAG00000002427	chd2	90	74.411	ENSPCIG00000009417	-	100	67.555	Phascolarctos_cinereus
ENSCVAG00000002427	chd2	100	84.077	ENSPFOG00000007050	chd2	100	84.959	Poecilia_formosa
ENSCVAG00000002427	chd2	100	84.298	ENSPLAG00000005067	chd2	100	85.069	Poecilia_latipinna
ENSCVAG00000002427	chd2	100	84.132	ENSPMEG00000019628	chd2	100	85.014	Poecilia_mexicana
ENSCVAG00000002427	chd2	99	69.357	ENSPPYG00000006799	-	100	63.031	Pongo_abelii
ENSCVAG00000002427	chd2	100	63.127	ENSPCOG00000028084	-	100	64.267	Propithecus_coquereli
ENSCVAG00000002427	chd2	98	79.780	ENSPNYG00000010273	chd2	98	92.941	Pundamilia_nyererei
ENSCVAG00000002427	chd2	77	76.223	ENSPNAG00000016719	chd2	100	70.595	Pygocentrus_nattereri
ENSCVAG00000002427	chd2	99	71.357	ENSRNOG00000012716	Chd2	100	63.929	Rattus_norvegicus
ENSCVAG00000002427	chd2	100	63.547	ENSRBIG00000036875	-	100	63.395	Rhinopithecus_bieti
ENSCVAG00000002427	chd2	99	70.929	ENSRROG00000041087	-	100	64.267	Rhinopithecus_roxellana
ENSCVAG00000002427	chd2	99	71.000	ENSSBOG00000023754	-	100	64.359	Saimiri_boliviensis_boliviensis
ENSCVAG00000002427	chd2	100	72.000	ENSSHAG00000012513	-	100	65.486	Sarcophilus_harrisii
ENSCVAG00000002427	chd2	100	72.742	ENSSFOG00015023759	chd2	100	73.650	Scleropages_formosus
ENSCVAG00000002427	chd2	100	80.615	ENSSMAG00000001726	chd2	99	90.588	Scophthalmus_maximus
ENSCVAG00000002427	chd2	98	79.605	ENSSLDG00000001146	chd2	99	79.581	Seriola_lalandi_dorsalis
ENSCVAG00000002427	chd2	79	80.000	ENSSARG00000014112	-	82	80.000	Sorex_araneus
ENSCVAG00000002427	chd2	99	64.108	ENSSPUG00000011266	-	94	79.592	Sphenodon_punctatus
ENSCVAG00000002427	chd2	98	79.279	ENSSPAG00000016452	chd2	97	91.765	Stegastes_partitus
ENSCVAG00000002427	chd2	89	83.200	ENSSSCG00000002266	-	100	66.394	Sus_scrofa
ENSCVAG00000002427	chd2	96	72.419	ENSTGUG00000008540	-	100	64.205	Taeniopygia_guttata
ENSCVAG00000002427	chd2	90	85.122	ENSTRUG00000008842	chd2	91	85.462	Takifugu_rubripes
ENSCVAG00000002427	chd2	89	83.905	ENSTNIG00000010760	chd2	99	82.853	Tetraodon_nigroviridis
ENSCVAG00000002427	chd2	72	91.057	ENSTBEG00000017730	-	79	71.806	Tupaia_belangeri
ENSCVAG00000002427	chd2	91	67.518	ENSTTRG00000000430	-	88	68.959	Tursiops_truncatus
ENSCVAG00000002427	chd2	100	65.744	ENSUMAG00000000083	-	100	65.692	Ursus_maritimus
ENSCVAG00000002427	chd2	82	81.047	ENSVPAG00000009645	-	86	81.047	Vicugna_pacos
ENSCVAG00000002427	chd2	86	72.130	ENSXETG00000024129	chd2	96	72.333	Xenopus_tropicalis
ENSCVAG00000002427	chd2	96	94.340	ENSXCOG00000020255	chd2	100	94.286	Xiphophorus_couchianus
ENSCVAG00000002427	chd2	96	94.444	ENSXMAG00000002707	chd2	98	94.393	Xiphophorus_maculatus