EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002438 (Gene tree)
Gene ID: 107098530
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 40951 bases
Position: chrKL653286.1:200423-241373
Accession: 107098530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020792	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSCVAP00000020785	MMR_HSR1	PF01926.23	3.4e-05	1	1
ENSCVAP00000001423	MMR_HSR1	PF01926.23	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013450	-	4637	XM_015396263	ENSCVAP00000020785	1014 (aa)	XP_015251749	UPI000742C9F7
ENSCVAT00000013440	-	4691	XM_015396261	ENSCVAP00000001423	1032 (aa)	XP_015251747	UPI00074267A2
ENSCVAT00000013432	-	2871	-	ENSCVAP00000020792	956 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002438	opa1	100	93.726	ENSAPOG00000011980	opa1	100	93.822	Acanthochromis_polyacanthus
ENSCVAG00000002438	opa1	97	92.888	ENSACIG00000012521	opa1	97	96.296	Amphilophus_citrinellus
ENSCVAG00000002438	opa1	100	93.822	ENSAOCG00000020559	opa1	98	96.589	Amphiprion_ocellaris
ENSCVAG00000002438	opa1	100	90.698	ENSAPEG00000001641	opa1	97	94.134	Amphiprion_percula
ENSCVAG00000002438	opa1	96	90.164	ENSAMXG00000012295	opa1	100	94.407	Astyanax_mexicanus
ENSCVAG00000002438	opa1	96	49.475	WBGene00001134	eat-3	98	49.475	Caenorhabditis_elegans
ENSCVAG00000002438	opa1	97	87.027	ENSCSEG00000014266	opa1	95	90.237	Cynoglossus_semilaevis
ENSCVAG00000002438	opa1	100	85.897	ENSDARG00000070801	opa1	100	86.122	Danio_rerio
ENSCVAG00000002438	opa1	99	51.089	FBgn0261276	Opa1	98	51.089	Drosophila_melanogaster
ENSCVAG00000002438	opa1	97	90.215	ENSFHEG00000003616	opa1	98	91.444	Fundulus_heteroclitus
ENSCVAG00000002438	opa1	100	89.842	ENSGACG00000009278	opa1	98	92.267	Gasterosteus_aculeatus
ENSCVAG00000002438	opa1	96	92.258	ENSHBUG00000005897	opa1	98	92.258	Haplochromis_burtoni
ENSCVAG00000002438	opa1	100	88.178	ENSHCOG00000016756	opa1	99	95.745	Hippocampus_comes
ENSCVAG00000002438	opa1	77	96.065	ENSKMAG00000009415	opa1	94	96.185	Kryptolebias_marmoratus
ENSCVAG00000002438	opa1	97	89.032	ENSMMOG00000008891	opa1	95	93.065	Mola_mola
ENSCVAG00000002438	opa1	100	92.248	ENSMALG00000016968	opa1	100	92.345	Monopterus_albus
ENSCVAG00000002438	opa1	98	91.640	ENSNBRG00000020394	opa1	98	96.022	Neolamprologus_brichardi
ENSCVAG00000002438	opa1	100	82.171	ENSPKIG00000003379	opa1	100	82.171	Paramormyrops_kingsleyae
ENSCVAG00000002438	opa1	97	76.818	ENSPKIG00000006473	OPA1	97	77.028	Paramormyrops_kingsleyae
ENSCVAG00000002438	opa1	98	92.013	ENSPNYG00000021747	opa1	97	95.885	Pundamilia_nyererei
ENSCVAG00000002438	opa1	97	89.655	ENSPNAG00000001917	opa1	98	94.679	Pygocentrus_nattereri
ENSCVAG00000002438	opa1	89	94.250	ENSSFOG00015009303	OPA1	97	81.010	Scleropages_formosus
ENSCVAG00000002438	opa1	95	91.602	ENSSMAG00000001797	opa1	97	94.687	Scophthalmus_maximus
ENSCVAG00000002438	opa1	73	95.074	ENSSDUG00000004968	opa1	99	95.074	Seriola_dumerili
ENSCVAG00000002438	opa1	100	93.726	ENSSLDG00000011089	opa1	100	93.822	Seriola_lalandi_dorsalis
ENSCVAG00000002438	opa1	100	90.795	ENSSPAG00000018388	opa1	100	90.795	Stegastes_partitus
ENSCVAG00000002438	opa1	78	94.110	ENSXCOG00000003267	opa1	92	94.110	Xiphophorus_couchianus
ENSCVAG00000002438	opa1	77	97.143	ENSXMAG00000005593	opa1	99	96.477	Xiphophorus_maculatus