EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002476 (Gene tree)
Gene ID: 107096224
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 19152 bases
Position: chrKL653107.1:445120-464271
Accession: 107096224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020850	RRM_1	PF00076.22	3.4e-05	1	1
ENSCVAP00000020850	G-patch	PF01585.23	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013346	-	1179	XM_015392796	ENSCVAP00000020850	392 (aa)	XP_015248282	-

Gene Model

Click here to download ENSCVAG00000002476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002476	rbm17	100	75.854	ENSG00000134453	RBM17	100	74.505	Homo_sapiens
ENSCVAG00000002476	rbm17	99	87.250	ENSAPOG00000007101	rbm17	99	87.250	Acanthochromis_polyacanthus
ENSCVAG00000002476	rbm17	100	76.098	ENSAMEG00000002107	RBM17	100	74.752	Ailuropoda_melanoleuca
ENSCVAG00000002476	rbm17	100	86.375	ENSACIG00000006251	rbm17	100	87.160	Amphilophus_citrinellus
ENSCVAG00000002476	rbm17	100	88.250	ENSAOCG00000014892	rbm17	100	88.000	Amphiprion_ocellaris
ENSCVAG00000002476	rbm17	100	88.250	ENSAPEG00000022779	rbm17	100	88.000	Amphiprion_percula
ENSCVAG00000002476	rbm17	100	85.075	ENSATEG00000004406	rbm17	100	84.577	Anabas_testudineus
ENSCVAG00000002476	rbm17	100	75.912	ENSAPLG00000004190	RBM17	100	74.568	Anas_platyrhynchos
ENSCVAG00000002476	rbm17	89	72.368	ENSACAG00000005418	RBM17	99	70.509	Anolis_carolinensis
ENSCVAG00000002476	rbm17	100	77.250	ENSANAG00000030127	RBM17	92	91.228	Aotus_nancymaae
ENSCVAG00000002476	rbm17	100	72.265	ENSANAG00000019330	-	97	85.593	Aotus_nancymaae
ENSCVAG00000002476	rbm17	100	87.032	ENSACLG00000003928	rbm17	100	88.413	Astatotilapia_calliptera
ENSCVAG00000002476	rbm17	100	80.856	ENSAMXG00000005853	rbm17	100	79.345	Astyanax_mexicanus
ENSCVAG00000002476	rbm17	100	74.390	ENSBTAG00000011094	-	100	73.020	Bos_taurus
ENSCVAG00000002476	rbm17	100	75.610	ENSBTAG00000021951	RBM17	100	74.257	Bos_taurus
ENSCVAG00000002476	rbm17	73	33.103	WBGene00010233	F58B3.7	97	30.446	Caenorhabditis_elegans
ENSCVAG00000002476	rbm17	100	78.880	ENSCJAG00000020573	RBM17	100	76.590	Callithrix_jacchus
ENSCVAG00000002476	rbm17	100	76.098	ENSCAFG00000005206	RBM17	100	74.752	Canis_familiaris
ENSCVAG00000002476	rbm17	100	79.644	ENSCAFG00020005420	RBM17	100	76.590	Canis_lupus_dingo
ENSCVAG00000002476	rbm17	100	78.372	ENSCHIG00000023204	-	100	76.081	Capra_hircus
ENSCVAG00000002476	rbm17	100	74.257	ENSCHIG00000019921	-	100	72.277	Capra_hircus
ENSCVAG00000002476	rbm17	100	75.121	ENSTSYG00000001165	RBM17	97	90.517	Carlito_syrichta
ENSCVAG00000002476	rbm17	90	66.667	ENSCAPG00000006275	RBM17	100	64.167	Cavia_aperea
ENSCVAG00000002476	rbm17	100	77.834	ENSCPOG00000005679	RBM17	99	75.567	Cavia_porcellus
ENSCVAG00000002476	rbm17	100	76.098	ENSCCAG00000018655	RBM17	92	91.228	Cebus_capucinus
ENSCVAG00000002476	rbm17	100	78.626	ENSCATG00000041566	RBM17	98	83.721	Cercocebus_atys
ENSCVAG00000002476	rbm17	100	75.121	ENSCLAG00000012195	RBM17	99	73.775	Chinchilla_lanigera
ENSCVAG00000002476	rbm17	100	75.854	ENSCSAG00000013564	RBM17	100	74.505	Chlorocebus_sabaeus
ENSCVAG00000002476	rbm17	92	59.103	ENSCHOG00000005131	RBM17	100	57.373	Choloepus_hoffmanni
ENSCVAG00000002476	rbm17	100	76.156	ENSCPBG00000019836	RBM17	100	74.815	Chrysemys_picta_bellii
ENSCVAG00000002476	rbm17	100	43.387	ENSCSAVG00000008782	-	100	40.603	Ciona_savignyi
ENSCVAG00000002476	rbm17	100	76.675	ENSCANG00000030987	RBM17	98	83.721	Colobus_angolensis_palliatus
ENSCVAG00000002476	rbm17	97	71.204	ENSCANG00000023715	-	99	69.452	Colobus_angolensis_palliatus
ENSCVAG00000002476	rbm17	100	63.119	ENSCGRG00001009256	-	100	62.871	Cricetulus_griseus_chok1gshd
ENSCVAG00000002476	rbm17	100	75.362	ENSCGRG00001013842	Rbm17	100	74.020	Cricetulus_griseus_chok1gshd
ENSCVAG00000002476	rbm17	100	75.362	ENSCGRG00000006907	Rbm17	100	74.020	Cricetulus_griseus_crigri
ENSCVAG00000002476	rbm17	100	84.406	ENSCSEG00000018164	rbm17	100	84.653	Cynoglossus_semilaevis
ENSCVAG00000002476	rbm17	100	72.209	ENSDARG00000031346	rbm17	100	74.048	Danio_rerio
ENSCVAG00000002476	rbm17	100	75.854	ENSDNOG00000035920	RBM17	100	74.505	Dasypus_novemcinctus
ENSCVAG00000002476	rbm17	99	38.095	FBgn0086683	Spf45	62	49.138	Drosophila_melanogaster
ENSCVAG00000002476	rbm17	89	83.568	ENSETEG00000006642	RBM17	100	62.095	Echinops_telfairi
ENSCVAG00000002476	rbm17	75	59.914	ENSEBUG00000010253	rbm17	89	64.286	Eptatretus_burgeri
ENSCVAG00000002476	rbm17	92	74.667	ENSEASG00005009236	-	100	70.509	Equus_asinus_asinus
ENSCVAG00000002476	rbm17	100	77.889	ENSEASG00005019205	-	100	75.628	Equus_asinus_asinus
ENSCVAG00000002476	rbm17	100	73.791	ENSECAG00000008939	RBM17	100	70.483	Equus_caballus
ENSCVAG00000002476	rbm17	100	67.980	ENSECAG00000001379	-	100	64.109	Equus_caballus
ENSCVAG00000002476	rbm17	85	57.790	ENSEEUG00000013077	RBM17	100	55.908	Erinaceus_europaeus
ENSCVAG00000002476	rbm17	100	77.156	ENSELUG00000006440	rbm17	100	76.690	Esox_lucius
ENSCVAG00000002476	rbm17	100	76.098	ENSFCAG00000031988	RBM17	100	74.752	Felis_catus
ENSCVAG00000002476	rbm17	100	75.366	ENSFALG00000001790	RBM17	100	74.010	Ficedula_albicollis
ENSCVAG00000002476	rbm17	100	75.121	ENSFDAG00000007470	RBM17	100	73.775	Fukomys_damarensis
ENSCVAG00000002476	rbm17	100	91.349	ENSFHEG00000001266	rbm17	100	90.840	Fundulus_heteroclitus
ENSCVAG00000002476	rbm17	99	76.867	ENSGMOG00000008438	rbm17	100	77.108	Gadus_morhua
ENSCVAG00000002476	rbm17	100	76.341	ENSGALG00000006332	RBM17	100	75.000	Gallus_gallus
ENSCVAG00000002476	rbm17	100	89.848	ENSGAFG00000019879	rbm17	100	90.609	Gambusia_affinis
ENSCVAG00000002476	rbm17	99	84.328	ENSGACG00000019174	rbm17	99	84.328	Gasterosteus_aculeatus
ENSCVAG00000002476	rbm17	100	76.156	ENSGAGG00000019906	RBM17	100	74.815	Gopherus_agassizii
ENSCVAG00000002476	rbm17	100	87.345	ENSHBUG00000016624	rbm17	100	88.413	Haplochromis_burtoni
ENSCVAG00000002476	rbm17	100	75.121	ENSHGLG00000011580	RBM17	100	73.775	Heterocephalus_glaber_female
ENSCVAG00000002476	rbm17	100	66.667	ENSHGLG00100010556	-	100	60.442	Heterocephalus_glaber_male
ENSCVAG00000002476	rbm17	100	75.121	ENSHGLG00100010460	RBM17	100	73.775	Heterocephalus_glaber_male
ENSCVAG00000002476	rbm17	99	82.212	ENSHCOG00000010865	rbm17	100	82.212	Hippocampus_comes
ENSCVAG00000002476	rbm17	100	75.689	ENSIPUG00000007699	Rbm17	100	81.203	Ictalurus_punctatus
ENSCVAG00000002476	rbm17	100	75.362	ENSSTOG00000013591	RBM17	100	74.020	Ictidomys_tridecemlineatus
ENSCVAG00000002476	rbm17	100	75.362	ENSJJAG00000022886	Rbm17	100	74.020	Jaculus_jaculus
ENSCVAG00000002476	rbm17	100	55.366	ENSJJAG00000000993	-	100	55.198	Jaculus_jaculus
ENSCVAG00000002476	rbm17	100	88.279	ENSKMAG00000021400	rbm17	100	88.917	Kryptolebias_marmoratus
ENSCVAG00000002476	rbm17	100	85.891	ENSLBEG00000000881	rbm17	100	81.473	Labrus_bergylta
ENSCVAG00000002476	rbm17	99	61.502	ENSLACG00000017297	RBM17	99	60.471	Latimeria_chalumnae
ENSCVAG00000002476	rbm17	100	79.167	ENSLOCG00000015659	rbm17	100	75.616	Lepisosteus_oculatus
ENSCVAG00000002476	rbm17	100	74.760	ENSLAFG00000011629	RBM17	100	73.415	Loxodonta_africana
ENSCVAG00000002476	rbm17	100	78.626	ENSMFAG00000035521	RBM17	98	83.721	Macaca_fascicularis
ENSCVAG00000002476	rbm17	100	75.854	ENSMMUG00000015152	RBM17	98	83.721	Macaca_mulatta
ENSCVAG00000002476	rbm17	100	78.626	ENSMNEG00000017264	RBM17	98	83.721	Macaca_nemestrina
ENSCVAG00000002476	rbm17	100	78.626	ENSMLEG00000029340	RBM17	98	83.721	Mandrillus_leucophaeus
ENSCVAG00000002476	rbm17	100	82.872	ENSMAMG00000000387	rbm17	100	83.206	Mastacembelus_armatus
ENSCVAG00000002476	rbm17	100	87.032	ENSMZEG00005015179	rbm17	100	88.413	Maylandia_zebra
ENSCVAG00000002476	rbm17	100	75.060	ENSMGAG00000003981	RBM17	100	73.723	Meleagris_gallopavo
ENSCVAG00000002476	rbm17	100	75.362	ENSMAUG00000019247	Rbm17	100	74.020	Mesocricetus_auratus
ENSCVAG00000002476	rbm17	100	77.500	ENSMICG00000003976	-	100	77.250	Microcebus_murinus
ENSCVAG00000002476	rbm17	100	70.631	ENSMICG00000041489	-	100	70.388	Microcebus_murinus
ENSCVAG00000002476	rbm17	100	75.362	ENSMOCG00000011847	Rbm17	100	74.020	Microtus_ochrogaster
ENSCVAG00000002476	rbm17	92	63.158	ENSMOCG00000014517	-	99	62.500	Microtus_ochrogaster
ENSCVAG00000002476	rbm17	100	80.882	ENSMMOG00000010264	rbm17	100	80.392	Mola_mola
ENSCVAG00000002476	rbm17	100	76.098	ENSMODG00000016648	RBM17	100	74.752	Monodelphis_domestica
ENSCVAG00000002476	rbm17	100	87.786	ENSMALG00000010597	rbm17	100	87.532	Monopterus_albus
ENSCVAG00000002476	rbm17	100	75.362	MGP_CAROLIEiJ_G0023173	Rbm17	100	74.020	Mus_caroli
ENSCVAG00000002476	rbm17	100	75.362	ENSMUSG00000037197	Rbm17	100	74.020	Mus_musculus
ENSCVAG00000002476	rbm17	100	75.845	MGP_PahariEiJ_G0019233	Rbm17	100	74.510	Mus_pahari
ENSCVAG00000002476	rbm17	100	75.362	MGP_SPRETEiJ_G0024091	Rbm17	100	74.020	Mus_spretus
ENSCVAG00000002476	rbm17	85	73.371	ENSMPUG00000016359	RBM17	96	71.758	Mustela_putorius_furo
ENSCVAG00000002476	rbm17	100	73.735	ENSMLUG00000002302	-	100	72.372	Myotis_lucifugus
ENSCVAG00000002476	rbm17	100	72.927	ENSMLUG00000025709	-	100	69.975	Myotis_lucifugus
ENSCVAG00000002476	rbm17	100	57.506	ENSNGAG00000000663	-	100	57.107	Nannospalax_galili
ENSCVAG00000002476	rbm17	100	75.362	ENSNGAG00000000741	Rbm17	100	74.020	Nannospalax_galili
ENSCVAG00000002476	rbm17	100	86.768	ENSNBRG00000018148	rbm17	100	86.768	Neolamprologus_brichardi
ENSCVAG00000002476	rbm17	100	77.193	ENSNLEG00000033350	RBM17	92	91.228	Nomascus_leucogenys
ENSCVAG00000002476	rbm17	100	70.732	ENSMEUG00000011347	RBM17	100	69.307	Notamacropus_eugenii
ENSCVAG00000002476	rbm17	100	74.940	ENSODEG00000004393	RBM17	100	73.594	Octodon_degus
ENSCVAG00000002476	rbm17	97	60.102	ENSODEG00000007286	-	99	57.513	Octodon_degus
ENSCVAG00000002476	rbm17	100	86.585	ENSONIG00000011838	rbm17	100	86.946	Oreochromis_niloticus
ENSCVAG00000002476	rbm17	100	75.862	ENSOANG00000015455	RBM17	100	73.892	Ornithorhynchus_anatinus
ENSCVAG00000002476	rbm17	100	87.121	ENSORLG00000028798	rbm17	100	87.121	Oryzias_latipes
ENSCVAG00000002476	rbm17	100	87.532	ENSORLG00020004593	rbm17	100	87.532	Oryzias_latipes_hni
ENSCVAG00000002476	rbm17	100	85.891	ENSORLG00015000033	rbm17	100	85.891	Oryzias_latipes_hsok
ENSCVAG00000002476	rbm17	100	82.423	ENSOMEG00000012060	rbm17	100	92.453	Oryzias_melastigma
ENSCVAG00000002476	rbm17	100	75.604	ENSOGAG00000015687	RBM17	100	76.471	Otolemur_garnettii
ENSCVAG00000002476	rbm17	100	75.610	ENSOARG00000012975	RBM17	100	74.257	Ovis_aries
ENSCVAG00000002476	rbm17	100	77.667	ENSPPAG00000032347	RBM17	92	91.228	Pan_paniscus
ENSCVAG00000002476	rbm17	100	76.098	ENSPPRG00000010706	RBM17	100	74.752	Panthera_pardus
ENSCVAG00000002476	rbm17	100	76.098	ENSPTIG00000007596	RBM17	100	74.752	Panthera_tigris_altaica
ENSCVAG00000002476	rbm17	100	77.667	ENSPTRG00000002265	RBM17	92	91.228	Pan_troglodytes
ENSCVAG00000002476	rbm17	100	78.626	ENSPANG00000023425	RBM17	98	83.721	Papio_anubis
ENSCVAG00000002476	rbm17	100	77.262	ENSPKIG00000025526	rbm17	100	75.430	Paramormyrops_kingsleyae
ENSCVAG00000002476	rbm17	100	76.962	ENSPKIG00000005048	-	100	76.709	Paramormyrops_kingsleyae
ENSCVAG00000002476	rbm17	100	74.879	ENSPSIG00000012332	RBM17	100	73.529	Pelodiscus_sinensis
ENSCVAG00000002476	rbm17	100	84.040	ENSPMGG00000007980	rbm17	100	83.459	Periophthalmus_magnuspinnatus
ENSCVAG00000002476	rbm17	100	75.362	ENSPEMG00000014320	Rbm17	100	74.020	Peromyscus_maniculatus_bairdii
ENSCVAG00000002476	rbm17	100	75.728	ENSPCIG00000019260	-	100	74.384	Phascolarctos_cinereus
ENSCVAG00000002476	rbm17	100	85.511	ENSPFOG00000013271	rbm17	100	85.511	Poecilia_formosa
ENSCVAG00000002476	rbm17	100	89.594	ENSPLAG00000004455	rbm17	100	89.594	Poecilia_latipinna
ENSCVAG00000002476	rbm17	100	89.330	ENSPMEG00000014864	rbm17	100	89.330	Poecilia_mexicana
ENSCVAG00000002476	rbm17	100	90.609	ENSPREG00000015589	rbm17	100	90.609	Poecilia_reticulata
ENSCVAG00000002476	rbm17	80	57.009	ENSPPYG00000019042	-	100	57.278	Pongo_abelii
ENSCVAG00000002476	rbm17	99	59.548	ENSPPYG00000019881	-	100	57.252	Pongo_abelii
ENSCVAG00000002476	rbm17	100	75.854	ENSPPYG00000002067	RBM17	100	74.505	Pongo_abelii
ENSCVAG00000002476	rbm17	100	68.537	ENSPCAG00000016879	RBM17	100	67.079	Procavia_capensis
ENSCVAG00000002476	rbm17	100	78.934	ENSPCOG00000027881	RBM17	100	78.934	Propithecus_coquereli
ENSCVAG00000002476	rbm17	100	69.825	ENSPVAG00000015499	RBM17	100	67.581	Pteropus_vampyrus
ENSCVAG00000002476	rbm17	100	84.478	ENSPNYG00000015274	rbm17	100	84.478	Pundamilia_nyererei
ENSCVAG00000002476	rbm17	100	82.323	ENSPNAG00000030046	rbm17	100	82.323	Pygocentrus_nattereri
ENSCVAG00000002476	rbm17	100	75.362	ENSRNOG00000018767	Rbm17	100	74.020	Rattus_norvegicus
ENSCVAG00000002476	rbm17	100	77.193	ENSRBIG00000043727	RBM17	92	91.228	Rhinopithecus_bieti
ENSCVAG00000002476	rbm17	100	78.626	ENSRROG00000044142	RBM17	98	83.721	Rhinopithecus_roxellana
ENSCVAG00000002476	rbm17	100	66.910	ENSSBOG00000023653	-	100	64.691	Saimiri_boliviensis_boliviensis
ENSCVAG00000002476	rbm17	100	78.626	ENSSBOG00000031661	-	94	88.793	Saimiri_boliviensis_boliviensis
ENSCVAG00000002476	rbm17	100	76.098	ENSSHAG00000012480	-	100	74.752	Sarcophilus_harrisii
ENSCVAG00000002476	rbm17	100	77.451	ENSSFOG00015009892	rbm17	100	77.451	Scleropages_formosus
ENSCVAG00000002476	rbm17	100	82.045	ENSSMAG00000012368	rbm17	100	83.715	Scophthalmus_maximus
ENSCVAG00000002476	rbm17	100	88.295	ENSSDUG00000015015	rbm17	100	88.041	Seriola_dumerili
ENSCVAG00000002476	rbm17	100	88.295	ENSSLDG00000014486	rbm17	100	88.041	Seriola_lalandi_dorsalis
ENSCVAG00000002476	rbm17	99	75.854	ENSSPUG00000001036	RBM17	99	74.505	Sphenodon_punctatus
ENSCVAG00000002476	rbm17	100	87.129	ENSSPAG00000002338	rbm17	100	87.129	Stegastes_partitus
ENSCVAG00000002476	rbm17	100	75.610	ENSSSCG00000011134	RBM17	100	74.257	Sus_scrofa
ENSCVAG00000002476	rbm17	100	74.879	ENSTGUG00000002013	RBM17	100	73.529	Taeniopygia_guttata
ENSCVAG00000002476	rbm17	100	84.615	ENSTRUG00000010698	rbm17	100	83.127	Takifugu_rubripes
ENSCVAG00000002476	rbm17	100	83.498	ENSTNIG00000006892	rbm17	100	82.020	Tetraodon_nigroviridis
ENSCVAG00000002476	rbm17	100	61.634	ENSTBEG00000014686	RBM17	100	59.406	Tupaia_belangeri
ENSCVAG00000002476	rbm17	90	73.984	ENSTTRG00000001344	RBM17	100	72.452	Tursiops_truncatus
ENSCVAG00000002476	rbm17	100	78.734	ENSUAMG00000009499	RBM17	100	78.734	Ursus_americanus
ENSCVAG00000002476	rbm17	100	78.880	ENSUMAG00000012237	RBM17	100	78.880	Ursus_maritimus
ENSCVAG00000002476	rbm17	100	66.827	ENSVPAG00000005497	RBM17	100	65.087	Vicugna_pacos
ENSCVAG00000002476	rbm17	100	79.644	ENSVVUG00000006780	RBM17	100	76.590	Vulpes_vulpes
ENSCVAG00000002476	rbm17	99	73.632	ENSXETG00000018123	rbm17	100	71.393	Xenopus_tropicalis
ENSCVAG00000002476	rbm17	100	88.916	ENSXMAG00000008674	rbm17	100	89.303	Xiphophorus_maculatus