EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002484 (Gene tree)
Gene ID: 107098526
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13074 bases
Position: chrKL653286.1:121416-134489
Accession: 107098526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001493	MMR_HSR1	PF01926.23	8.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013337	-	2588	XM_015396256	ENSCVAP00000001493	625 (aa)	XP_015251742	UPI0007426E8F

Gene Model

Click here to download ENSCVAG00000002484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002484	lsg1	99	66.210	ENSG00000041802	LSG1	89	79.747	Homo_sapiens
ENSCVAG00000002484	lsg1	100	80.635	ENSAPOG00000009694	lsg1	98	80.293	Acanthochromis_polyacanthus
ENSCVAG00000002484	lsg1	100	64.502	ENSAMEG00000009343	LSG1	98	64.341	Ailuropoda_melanoleuca
ENSCVAG00000002484	lsg1	98	80.713	ENSACIG00000012406	lsg1	97	81.107	Amphilophus_citrinellus
ENSCVAG00000002484	lsg1	100	80.573	ENSAOCG00000016066	lsg1	98	80.065	Amphiprion_ocellaris
ENSCVAG00000002484	lsg1	100	80.414	ENSAPEG00000003252	lsg1	98	79.902	Amphiprion_percula
ENSCVAG00000002484	lsg1	98	82.848	ENSATEG00000011794	lsg1	96	83.813	Anabas_testudineus
ENSCVAG00000002484	lsg1	95	61.490	ENSACAG00000004222	LSG1	100	62.102	Anolis_carolinensis
ENSCVAG00000002484	lsg1	99	65.957	ENSANAG00000021153	LSG1	97	66.199	Aotus_nancymaae
ENSCVAG00000002484	lsg1	100	80.277	ENSACLG00000000520	lsg1	98	80.411	Astatotilapia_calliptera
ENSCVAG00000002484	lsg1	100	72.713	ENSAMXG00000008271	lsg1	98	73.217	Astyanax_mexicanus
ENSCVAG00000002484	lsg1	99	66.667	ENSBTAG00000008461	LSG1	97	66.142	Bos_taurus
ENSCVAG00000002484	lsg1	73	48.990	WBGene00016907	C53H9.2	88	50.935	Caenorhabditis_elegans
ENSCVAG00000002484	lsg1	99	65.805	ENSCJAG00000013962	LSG1	97	65.679	Callithrix_jacchus
ENSCVAG00000002484	lsg1	95	66.137	ENSCAFG00000013445	LSG1	100	65.335	Canis_familiaris
ENSCVAG00000002484	lsg1	100	65.158	ENSCAFG00020002216	LSG1	99	65.072	Canis_lupus_dingo
ENSCVAG00000002484	lsg1	100	66.254	ENSCHIG00000015769	LSG1	98	66.190	Capra_hircus
ENSCVAG00000002484	lsg1	99	64.894	ENSTSYG00000001447	LSG1	97	64.642	Carlito_syrichta
ENSCVAG00000002484	lsg1	95	65.677	ENSCAPG00000009856	LSG1	99	65.625	Cavia_aperea
ENSCVAG00000002484	lsg1	99	65.502	ENSCCAG00000035744	LSG1	97	65.421	Cebus_capucinus
ENSCVAG00000002484	lsg1	99	67.375	ENSCATG00000042060	LSG1	97	65.319	Cercocebus_atys
ENSCVAG00000002484	lsg1	99	66.515	ENSCSAG00000008796	LSG1	89	65.991	Chlorocebus_sabaeus
ENSCVAG00000002484	lsg1	100	67.066	ENSCPBG00000015941	LSG1	82	67.597	Chrysemys_picta_bellii
ENSCVAG00000002484	lsg1	84	49.143	ENSCING00000007079	-	94	50.305	Ciona_intestinalis
ENSCVAG00000002484	lsg1	81	53.788	ENSCSAVG00000002514	-	96	54.032	Ciona_savignyi
ENSCVAG00000002484	lsg1	99	66.616	ENSCANG00000030709	LSG1	97	66.252	Colobus_angolensis_palliatus
ENSCVAG00000002484	lsg1	99	66.458	ENSCGRG00001019846	Lsg1	97	65.600	Cricetulus_griseus_chok1gshd
ENSCVAG00000002484	lsg1	99	65.741	ENSCGRG00000014617	Lsg1	97	65.354	Cricetulus_griseus_crigri
ENSCVAG00000002484	lsg1	98	77.778	ENSCSEG00000008522	lsg1	97	77.352	Cynoglossus_semilaevis
ENSCVAG00000002484	lsg1	100	74.574	ENSDARG00000015352	lsg1	97	74.478	Danio_rerio
ENSCVAG00000002484	lsg1	99	65.549	ENSDNOG00000006224	LSG1	97	65.469	Dasypus_novemcinctus
ENSCVAG00000002484	lsg1	99	50.000	FBgn0266284	Ns3	95	50.168	Drosophila_melanogaster
ENSCVAG00000002484	lsg1	88	73.333	ENSETEG00000003888	LSG1	87	76.271	Echinops_telfairi
ENSCVAG00000002484	lsg1	88	57.686	ENSEBUG00000003119	lsg1	85	57.858	Eptatretus_burgeri
ENSCVAG00000002484	lsg1	99	66.265	ENSEASG00005000678	LSG1	97	65.895	Equus_asinus_asinus
ENSCVAG00000002484	lsg1	99	65.564	ENSECAG00000017659	LSG1	97	65.741	Equus_caballus
ENSCVAG00000002484	lsg1	86	56.410	ENSEEUG00000015217	LSG1	75	59.845	Erinaceus_europaeus
ENSCVAG00000002484	lsg1	100	72.601	ENSELUG00000023973	lsg1	98	73.651	Esox_lucius
ENSCVAG00000002484	lsg1	100	64.371	ENSFCAG00000024957	LSG1	98	65.163	Felis_catus
ENSCVAG00000002484	lsg1	92	63.192	ENSFALG00000007210	LSG1	94	63.029	Ficedula_albicollis
ENSCVAG00000002484	lsg1	99	64.651	ENSFDAG00000017373	LSG1	97	65.600	Fukomys_damarensis
ENSCVAG00000002484	lsg1	97	85.852	ENSFHEG00000003680	lsg1	97	84.887	Fundulus_heteroclitus
ENSCVAG00000002484	lsg1	98	70.305	ENSGMOG00000015834	lsg1	97	70.323	Gadus_morhua
ENSCVAG00000002484	lsg1	99	61.631	ENSGALG00000007058	LSG1	86	61.646	Gallus_gallus
ENSCVAG00000002484	lsg1	97	87.622	ENSGAFG00000015831	lsg1	97	86.971	Gambusia_affinis
ENSCVAG00000002484	lsg1	98	77.724	ENSGACG00000009323	lsg1	97	77.331	Gasterosteus_aculeatus
ENSCVAG00000002484	lsg1	99	66.514	ENSGGOG00000000520	LSG1	97	65.991	Gorilla_gorilla
ENSCVAG00000002484	lsg1	100	81.279	ENSHBUG00000005659	lsg1	98	81.440	Haplochromis_burtoni
ENSCVAG00000002484	lsg1	99	65.884	ENSHGLG00000017390	LSG1	97	64.593	Heterocephalus_glaber_female
ENSCVAG00000002484	lsg1	99	65.884	ENSHGLG00100018587	LSG1	97	64.593	Heterocephalus_glaber_male
ENSCVAG00000002484	lsg1	97	78.080	ENSHCOG00000016848	lsg1	97	78.080	Hippocampus_comes
ENSCVAG00000002484	lsg1	100	74.684	ENSIPUG00000008631	lsg1	97	74.472	Ictalurus_punctatus
ENSCVAG00000002484	lsg1	75	59.604	ENSSTOG00000010234	LSG1	92	60.922	Ictidomys_tridecemlineatus
ENSCVAG00000002484	lsg1	99	67.241	ENSJJAG00000015513	Lsg1	97	66.720	Jaculus_jaculus
ENSCVAG00000002484	lsg1	98	78.930	ENSKMAG00000009681	lsg1	97	78.339	Kryptolebias_marmoratus
ENSCVAG00000002484	lsg1	98	78.084	ENSLBEG00000024261	lsg1	97	78.140	Labrus_bergylta
ENSCVAG00000002484	lsg1	100	65.172	ENSLACG00000013399	LSG1	98	66.204	Latimeria_chalumnae
ENSCVAG00000002484	lsg1	98	72.484	ENSLOCG00000004918	lsg1	97	71.851	Lepisosteus_oculatus
ENSCVAG00000002484	lsg1	99	66.512	ENSLAFG00000012919	-	97	66.296	Loxodonta_africana
ENSCVAG00000002484	lsg1	99	67.223	ENSMFAG00000039903	LSG1	97	65.163	Macaca_fascicularis
ENSCVAG00000002484	lsg1	99	67.223	ENSMMUG00000010708	LSG1	97	66.719	Macaca_mulatta
ENSCVAG00000002484	lsg1	99	67.223	ENSMNEG00000031538	LSG1	97	65.163	Macaca_nemestrina
ENSCVAG00000002484	lsg1	99	67.071	ENSMLEG00000041184	LSG1	97	66.719	Mandrillus_leucophaeus
ENSCVAG00000002484	lsg1	100	78.233	ENSMAMG00000000470	lsg1	98	77.207	Mastacembelus_armatus
ENSCVAG00000002484	lsg1	100	81.435	ENSMZEG00005017865	lsg1	98	81.600	Maylandia_zebra
ENSCVAG00000002484	lsg1	88	62.775	ENSMGAG00000007050	LSG1	99	62.692	Meleagris_gallopavo
ENSCVAG00000002484	lsg1	96	64.182	ENSMAUG00000016976	Lsg1	90	67.376	Mesocricetus_auratus
ENSCVAG00000002484	lsg1	99	64.502	ENSMICG00000049087	LSG1	97	64.632	Microcebus_murinus
ENSCVAG00000002484	lsg1	99	64.715	ENSMOCG00000022136	Lsg1	97	64.465	Microtus_ochrogaster
ENSCVAG00000002484	lsg1	98	75.654	ENSMMOG00000008884	lsg1	97	75.614	Mola_mola
ENSCVAG00000002484	lsg1	99	56.240	ENSMODG00000019828	LSG1	98	55.919	Monodelphis_domestica
ENSCVAG00000002484	lsg1	100	67.183	MGP_CAROLIEiJ_G0020648	Lsg1	98	66.984	Mus_caroli
ENSCVAG00000002484	lsg1	100	66.718	ENSMUSG00000022538	Lsg1	98	67.143	Mus_musculus
ENSCVAG00000002484	lsg1	98	66.301	MGP_PahariEiJ_G0016352	Lsg1	97	66.351	Mus_pahari
ENSCVAG00000002484	lsg1	100	66.512	MGP_SPRETEiJ_G0021544	Lsg1	98	67.091	Mus_spretus
ENSCVAG00000002484	lsg1	100	65.961	ENSMPUG00000003734	LSG1	98	65.319	Mustela_putorius_furo
ENSCVAG00000002484	lsg1	100	65.596	ENSMLUG00000012548	LSG1	98	65.987	Myotis_lucifugus
ENSCVAG00000002484	lsg1	99	65.480	ENSNGAG00000021872	Lsg1	97	65.873	Nannospalax_galili
ENSCVAG00000002484	lsg1	99	66.717	ENSNLEG00000008293	LSG1	97	66.199	Nomascus_leucogenys
ENSCVAG00000002484	lsg1	68	72.165	ENSMEUG00000009041	-	75	72.165	Notamacropus_eugenii
ENSCVAG00000002484	lsg1	100	81.579	ENSONIG00000002635	lsg1	98	81.746	Oreochromis_niloticus
ENSCVAG00000002484	lsg1	95	68.167	ENSOANG00000012742	LSG1	99	67.480	Ornithorhynchus_anatinus
ENSCVAG00000002484	lsg1	99	65.706	ENSOCUG00000004817	LSG1	97	65.008	Oryctolagus_cuniculus
ENSCVAG00000002484	lsg1	98	80.813	ENSORLG00000007695	lsg1	97	80.392	Oryzias_latipes
ENSCVAG00000002484	lsg1	98	80.650	ENSORLG00020016286	lsg1	97	80.229	Oryzias_latipes_hni
ENSCVAG00000002484	lsg1	98	80.163	ENSORLG00015012025	lsg1	97	79.248	Oryzias_latipes_hsok
ENSCVAG00000002484	lsg1	98	79.708	ENSOMEG00000022379	lsg1	97	78.793	Oryzias_melastigma
ENSCVAG00000002484	lsg1	99	64.653	ENSOGAG00000003475	LSG1	97	64.551	Otolemur_garnettii
ENSCVAG00000002484	lsg1	100	65.850	ENSOARG00000020403	LSG1	98	65.149	Ovis_aries
ENSCVAG00000002484	lsg1	99	66.970	ENSPPAG00000029271	LSG1	97	66.719	Pan_paniscus
ENSCVAG00000002484	lsg1	100	63.556	ENSPPRG00000010281	LSG1	98	64.462	Panthera_pardus
ENSCVAG00000002484	lsg1	100	64.222	ENSPTIG00000010789	LSG1	98	65.163	Panthera_tigris_altaica
ENSCVAG00000002484	lsg1	99	66.818	ENSPTRG00000015760	LSG1	97	66.563	Pan_troglodytes
ENSCVAG00000002484	lsg1	99	67.071	ENSPANG00000018249	LSG1	97	65.008	Papio_anubis
ENSCVAG00000002484	lsg1	99	73.418	ENSPKIG00000002895	lsg1	97	74.309	Paramormyrops_kingsleyae
ENSCVAG00000002484	lsg1	96	62.267	ENSPSIG00000009821	LSG1	99	61.742	Pelodiscus_sinensis
ENSCVAG00000002484	lsg1	95	78.167	ENSPMGG00000000931	lsg1	100	78.000	Periophthalmus_magnuspinnatus
ENSCVAG00000002484	lsg1	99	65.145	ENSPEMG00000012082	-	97	64.899	Peromyscus_maniculatus_bairdii
ENSCVAG00000002484	lsg1	99	61.019	ENSPMAG00000007451	lsg1	98	60.676	Petromyzon_marinus
ENSCVAG00000002484	lsg1	98	64.398	ENSPCIG00000013890	LSG1	80	64.398	Phascolarctos_cinereus
ENSCVAG00000002484	lsg1	97	87.419	ENSPFOG00000021882	lsg1	97	87.419	Poecilia_formosa
ENSCVAG00000002484	lsg1	97	86.129	ENSPLAG00000019536	lsg1	97	86.290	Poecilia_latipinna
ENSCVAG00000002484	lsg1	97	86.334	ENSPMEG00000017281	lsg1	97	86.334	Poecilia_mexicana
ENSCVAG00000002484	lsg1	97	74.802	ENSPREG00000006048	lsg1	97	74.485	Poecilia_reticulata
ENSCVAG00000002484	lsg1	92	66.338	ENSPPYG00000014425	LSG1	97	66.271	Pongo_abelii
ENSCVAG00000002484	lsg1	89	70.667	ENSPCAG00000005511	LSG1	71	74.576	Procavia_capensis
ENSCVAG00000002484	lsg1	99	64.643	ENSPCOG00000012360	LSG1	97	64.075	Propithecus_coquereli
ENSCVAG00000002484	lsg1	100	80.431	ENSPNYG00000021994	lsg1	98	80.569	Pundamilia_nyererei
ENSCVAG00000002484	lsg1	100	74.189	ENSPNAG00000015533	lsg1	98	73.810	Pygocentrus_nattereri
ENSCVAG00000002484	lsg1	100	65.854	ENSRNOG00000001727	Lsg1	98	65.469	Rattus_norvegicus
ENSCVAG00000002484	lsg1	99	66.667	ENSRBIG00000029053	LSG1	97	65.991	Rhinopithecus_bieti
ENSCVAG00000002484	lsg1	99	66.667	ENSRROG00000037702	LSG1	97	65.991	Rhinopithecus_roxellana
ENSCVAG00000002484	lsg1	81	41.399	YGL099W	LSG1	70	42.147	Saccharomyces_cerevisiae
ENSCVAG00000002484	lsg1	99	65.653	ENSSBOG00000034938	LSG1	97	66.044	Saimiri_boliviensis_boliviensis
ENSCVAG00000002484	lsg1	77	62.193	ENSSHAG00000003487	LSG1	100	62.004	Sarcophilus_harrisii
ENSCVAG00000002484	lsg1	98	73.558	ENSSFOG00015008955	lsg1	97	73.591	Scleropages_formosus
ENSCVAG00000002484	lsg1	98	80.794	ENSSDUG00000004622	lsg1	98	80.542	Seriola_dumerili
ENSCVAG00000002484	lsg1	98	81.006	ENSSLDG00000010869	lsg1	97	80.261	Seriola_lalandi_dorsalis
ENSCVAG00000002484	lsg1	83	68.563	ENSSARG00000012981	LSG1	70	73.043	Sorex_araneus
ENSCVAG00000002484	lsg1	100	66.667	ENSSPUG00000016347	LSG1	97	65.625	Sphenodon_punctatus
ENSCVAG00000002484	lsg1	100	78.605	ENSSPAG00000005508	lsg1	98	80.000	Stegastes_partitus
ENSCVAG00000002484	lsg1	100	64.961	ENSSSCG00000011827	LSG1	98	64.308	Sus_scrofa
ENSCVAG00000002484	lsg1	88	61.833	ENSTGUG00000009068	LSG1	100	61.809	Taeniopygia_guttata
ENSCVAG00000002484	lsg1	97	73.878	ENSTRUG00000017380	lsg1	97	72.917	Takifugu_rubripes
ENSCVAG00000002484	lsg1	97	78.641	ENSTNIG00000015570	lsg1	97	77.994	Tetraodon_nigroviridis
ENSCVAG00000002484	lsg1	100	61.562	ENSTTRG00000000559	LSG1	98	61.381	Tursiops_truncatus
ENSCVAG00000002484	lsg1	100	64.795	ENSUAMG00000012454	LSG1	98	65.062	Ursus_americanus
ENSCVAG00000002484	lsg1	100	64.795	ENSUMAG00000000855	LSG1	98	65.062	Ursus_maritimus
ENSCVAG00000002484	lsg1	95	62.798	ENSVPAG00000012400	LSG1	100	61.920	Vicugna_pacos
ENSCVAG00000002484	lsg1	99	63.623	ENSVVUG00000008956	LSG1	98	64.075	Vulpes_vulpes
ENSCVAG00000002484	lsg1	100	66.975	ENSXETG00000003451	lsg1	98	66.559	Xenopus_tropicalis
ENSCVAG00000002484	lsg1	97	86.591	ENSXCOG00000003239	lsg1	97	85.945	Xiphophorus_couchianus
ENSCVAG00000002484	lsg1	97	85.669	ENSXMAG00000005536	lsg1	98	85.039	Xiphophorus_maculatus