EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000002540 (Gene tree)
Gene ID: 107090658
Gene Symbol: ddx6
Alias: p54a|si:ch211-147p17.1
Full Name: DEAD-box helicase 6
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11516 bases
Position: chrKL652806.1:341349-352864
Accession: 107090658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001546	DEAD	PF00270.29	3.8e-43	1	1
ENSCVAP00000020864	DEAD	PF00270.29	6.1e-27	1	2
ENSCVAP00000020864	DEAD	PF00270.29	6.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013246	-	1293	-	ENSCVAP00000020864	430 (aa)	-	-
ENSCVAT00000013238	-	4313	XM_015384180	ENSCVAP00000001546	479 (aa)	XP_015239666	UPI0007426C4B

Gene Model

Click here to download ENSCVAG00000002540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000002540	ddx6	68	45.098	ENSCVAG00000020927	ddx1	53	45.098
ENSCVAG00000002540	ddx6	73	31.944	ENSCVAG00000010921	si:dkey-156n14.5	54	31.944
ENSCVAG00000002540	ddx6	99	81.342	ENSCVAG00000011006	-	96	81.342
ENSCVAG00000002540	ddx6	75	40.741	ENSCVAG00000011003	-	57	30.144
ENSCVAG00000002540	ddx6	76	38.753	ENSCVAG00000019209	eif4a1b	91	38.753
ENSCVAG00000002540	ddx6	76	39.295	ENSCVAG00000003186	eif4a2	90	39.295
ENSCVAG00000002540	ddx6	58	32.472	ENSCVAG00000006635	ddx55	66	30.334
ENSCVAG00000002540	ddx6	81	33.920	ENSCVAG00000014821	ddx20	52	33.920
ENSCVAG00000002540	ddx6	75	32.447	ENSCVAG00000008721	zgc:193690	80	34.496
ENSCVAG00000002540	ddx6	75	37.666	ENSCVAG00000012986	ddx19	79	37.666
ENSCVAG00000002540	ddx6	73	34.078	ENSCVAG00000010466	ddx49	75	34.078
ENSCVAG00000002540	ddx6	76	32.020	ENSCVAG00000015745	ddx23	54	32.020
ENSCVAG00000002540	ddx6	78	30.923	ENSCVAG00000001784	-	62	30.923
ENSCVAG00000002540	ddx6	78	36.053	ENSCVAG00000007477	DDX39A	89	36.053
ENSCVAG00000002540	ddx6	72	30.312	ENSCVAG00000018093	ddx5	71	30.312
ENSCVAG00000002540	ddx6	78	37.600	ENSCVAG00000006864	eif4a3	91	37.600
ENSCVAG00000002540	ddx6	61	30.341	ENSCVAG00000005890	ddx24	58	30.341
ENSCVAG00000002540	ddx6	67	31.722	ENSCVAG00000017936	ddx18	51	31.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002540	ddx6	99	88.382	ENSG00000110367	DDX6	99	88.382	Homo_sapiens
ENSCVAG00000002540	ddx6	99	96.058	ENSAPOG00000007695	ddx6	99	96.058	Acanthochromis_polyacanthus
ENSCVAG00000002540	ddx6	99	88.174	ENSAMEG00000006073	DDX6	99	88.174	Ailuropoda_melanoleuca
ENSCVAG00000002540	ddx6	99	86.530	ENSACIG00000023989	ddx6	99	87.126	Amphilophus_citrinellus
ENSCVAG00000002540	ddx6	99	96.058	ENSAOCG00000022849	ddx6	99	96.058	Amphiprion_ocellaris
ENSCVAG00000002540	ddx6	99	96.058	ENSAPEG00000013047	ddx6	99	96.058	Amphiprion_percula
ENSCVAG00000002540	ddx6	99	96.258	ENSATEG00000009693	ddx6	99	96.258	Anabas_testudineus
ENSCVAG00000002540	ddx6	100	87.785	ENSAPLG00000007274	DDX6	100	87.785	Anas_platyrhynchos
ENSCVAG00000002540	ddx6	99	83.468	ENSACAG00000017134	DDX6	99	87.578	Anolis_carolinensis
ENSCVAG00000002540	ddx6	99	60.788	ENSANAG00000032103	-	90	72.105	Aotus_nancymaae
ENSCVAG00000002540	ddx6	99	84.440	ENSANAG00000038280	-	99	84.124	Aotus_nancymaae
ENSCVAG00000002540	ddx6	99	95.634	ENSACLG00000022164	ddx6	99	95.634	Astatotilapia_calliptera
ENSCVAG00000002540	ddx6	99	92.754	ENSAMXG00000019553	ddx6	99	92.754	Astyanax_mexicanus
ENSCVAG00000002540	ddx6	99	88.174	ENSBTAG00000009067	DDX6	99	88.174	Bos_taurus
ENSCVAG00000002540	ddx6	99	88.174	ENSCJAG00000013591	DDX6	99	88.174	Callithrix_jacchus
ENSCVAG00000002540	ddx6	99	88.174	ENSCAFG00000012442	DDX6	99	88.174	Canis_familiaris
ENSCVAG00000002540	ddx6	99	88.174	ENSCAFG00020013150	DDX6	99	88.174	Canis_lupus_dingo
ENSCVAG00000002540	ddx6	99	87.759	ENSCHIG00000026114	DDX6	99	87.759	Capra_hircus
ENSCVAG00000002540	ddx6	99	88.174	ENSTSYG00000026313	DDX6	99	88.174	Carlito_syrichta
ENSCVAG00000002540	ddx6	81	60.891	ENSCAPG00000013040	DDX6	99	60.891	Cavia_aperea
ENSCVAG00000002540	ddx6	99	81.950	ENSCPOG00000010587	Ddx6	99	81.950	Cavia_porcellus
ENSCVAG00000002540	ddx6	99	84.025	ENSCCAG00000021636	-	99	84.025	Cebus_capucinus
ENSCVAG00000002540	ddx6	99	88.382	ENSCATG00000045025	DDX6	99	88.382	Cercocebus_atys
ENSCVAG00000002540	ddx6	99	66.320	ENSCATG00000009414	-	99	66.320	Cercocebus_atys
ENSCVAG00000002540	ddx6	99	87.967	ENSCLAG00000016749	DDX6	99	87.967	Chinchilla_lanigera
ENSCVAG00000002540	ddx6	99	88.382	ENSCSAG00000002564	DDX6	99	88.382	Chlorocebus_sabaeus
ENSCVAG00000002540	ddx6	87	92.530	ENSCHOG00000007565	DDX6	99	92.530	Choloepus_hoffmanni
ENSCVAG00000002540	ddx6	99	87.759	ENSCPBG00000004323	DDX6	99	87.759	Chrysemys_picta_bellii
ENSCVAG00000002540	ddx6	99	84.368	ENSCANG00000042664	DDX6	99	83.908	Colobus_angolensis_palliatus
ENSCVAG00000002540	ddx6	99	88.382	ENSCGRG00001023465	Ddx6	99	88.382	Cricetulus_griseus_chok1gshd
ENSCVAG00000002540	ddx6	99	88.382	ENSCGRG00000014165	Ddx6	99	88.382	Cricetulus_griseus_crigri
ENSCVAG00000002540	ddx6	99	94.191	ENSCSEG00000006875	ddx6	99	94.398	Cynoglossus_semilaevis
ENSCVAG00000002540	ddx6	99	91.097	ENSDARG00000061338	ddx6	99	91.097	Danio_rerio
ENSCVAG00000002540	ddx6	99	83.471	ENSDNOG00000014447	DDX6	99	83.471	Dasypus_novemcinctus
ENSCVAG00000002540	ddx6	88	80.000	ENSDORG00000001037	Ddx6	100	80.235	Dipodomys_ordii
ENSCVAG00000002540	ddx6	61	93.411	ENSETEG00000007589	-	69	93.411	Echinops_telfairi
ENSCVAG00000002540	ddx6	61	79.699	ENSEBUG00000010009	ddx6	71	85.115	Eptatretus_burgeri
ENSCVAG00000002540	ddx6	99	88.174	ENSEASG00005004961	DDX6	99	88.174	Equus_asinus_asinus
ENSCVAG00000002540	ddx6	99	88.174	ENSECAG00000000539	DDX6	99	88.174	Equus_caballus
ENSCVAG00000002540	ddx6	88	80.000	ENSEEUG00000002824	DDX6	100	80.282	Erinaceus_europaeus
ENSCVAG00000002540	ddx6	99	86.842	ENSELUG00000022660	ddx6	99	88.821	Esox_lucius
ENSCVAG00000002540	ddx6	99	88.174	ENSFCAG00000029360	DDX6	99	88.174	Felis_catus
ENSCVAG00000002540	ddx6	100	87.785	ENSFALG00000009831	DDX6	100	87.785	Ficedula_albicollis
ENSCVAG00000002540	ddx6	99	88.174	ENSFDAG00000012457	DDX6	99	88.174	Fukomys_damarensis
ENSCVAG00000002540	ddx6	100	98.548	ENSFHEG00000021202	ddx6	100	98.548	Fundulus_heteroclitus
ENSCVAG00000002540	ddx6	99	90.909	ENSGMOG00000009542	ddx6	99	90.289	Gadus_morhua
ENSCVAG00000002540	ddx6	100	87.785	ENSGALG00000033064	DDX6	100	87.785	Gallus_gallus
ENSCVAG00000002540	ddx6	100	96.266	ENSGAFG00000020279	ddx6	100	96.266	Gambusia_affinis
ENSCVAG00000002540	ddx6	99	92.723	ENSGACG00000012258	ddx6	99	92.723	Gasterosteus_aculeatus
ENSCVAG00000002540	ddx6	99	87.759	ENSGAGG00000020608	DDX6	99	87.759	Gopherus_agassizii
ENSCVAG00000002540	ddx6	99	69.710	ENSGGOG00000038856	-	99	69.710	Gorilla_gorilla
ENSCVAG00000002540	ddx6	99	84.018	ENSGGOG00000016751	DDX6	99	83.908	Gorilla_gorilla
ENSCVAG00000002540	ddx6	99	63.466	ENSGGOG00000023765	-	99	63.466	Gorilla_gorilla
ENSCVAG00000002540	ddx6	99	95.426	ENSHBUG00000009651	ddx6	99	95.426	Haplochromis_burtoni
ENSCVAG00000002540	ddx6	99	88.174	ENSHGLG00000004316	DDX6	99	88.174	Heterocephalus_glaber_female
ENSCVAG00000002540	ddx6	99	88.174	ENSHGLG00100014595	DDX6	99	88.174	Heterocephalus_glaber_male
ENSCVAG00000002540	ddx6	99	93.004	ENSHCOG00000012451	ddx6	99	93.429	Hippocampus_comes
ENSCVAG00000002540	ddx6	99	91.511	ENSIPUG00000000616	ddx6	99	91.511	Ictalurus_punctatus
ENSCVAG00000002540	ddx6	99	88.174	ENSSTOG00000014475	DDX6	99	88.174	Ictidomys_tridecemlineatus
ENSCVAG00000002540	ddx6	99	88.174	ENSJJAG00000021630	Ddx6	99	88.174	Jaculus_jaculus
ENSCVAG00000002540	ddx6	100	96.674	ENSKMAG00000003546	ddx6	100	96.674	Kryptolebias_marmoratus
ENSCVAG00000002540	ddx6	99	87.860	ENSLBEG00000017823	ddx6	99	83.037	Labrus_bergylta
ENSCVAG00000002540	ddx6	99	88.358	ENSLACG00000017153	DDX6	99	89.189	Latimeria_chalumnae
ENSCVAG00000002540	ddx6	99	90.289	ENSLOCG00000000770	ddx6	99	90.702	Lepisosteus_oculatus
ENSCVAG00000002540	ddx6	99	87.759	ENSLAFG00000011012	DDX6	99	87.759	Loxodonta_africana
ENSCVAG00000002540	ddx6	99	88.382	ENSMFAG00000042472	DDX6	99	88.382	Macaca_fascicularis
ENSCVAG00000002540	ddx6	99	88.382	ENSMMUG00000018651	DDX6	99	88.382	Macaca_mulatta
ENSCVAG00000002540	ddx6	99	63.808	ENSMMUG00000047408	-	99	64.644	Macaca_mulatta
ENSCVAG00000002540	ddx6	99	88.382	ENSMNEG00000033959	DDX6	99	88.382	Macaca_nemestrina
ENSCVAG00000002540	ddx6	99	88.382	ENSMLEG00000028151	DDX6	99	88.382	Mandrillus_leucophaeus
ENSCVAG00000002540	ddx6	99	94.070	ENSMAMG00000013732	ddx6	99	94.070	Mastacembelus_armatus
ENSCVAG00000002540	ddx6	99	95.634	ENSMZEG00005024098	ddx6	99	95.634	Maylandia_zebra
ENSCVAG00000002540	ddx6	100	87.785	ENSMGAG00000004123	DDX6	100	87.785	Meleagris_gallopavo
ENSCVAG00000002540	ddx6	99	87.967	ENSMAUG00000008886	Ddx6	99	87.967	Mesocricetus_auratus
ENSCVAG00000002540	ddx6	99	88.174	ENSMICG00000011519	DDX6	99	88.174	Microcebus_murinus
ENSCVAG00000002540	ddx6	99	88.382	ENSMOCG00000002068	Ddx6	99	88.382	Microtus_ochrogaster
ENSCVAG00000002540	ddx6	99	87.318	ENSMMOG00000001233	ddx6	99	87.318	Mola_mola
ENSCVAG00000002540	ddx6	99	88.174	ENSMODG00000013375	DDX6	99	88.174	Monodelphis_domestica
ENSCVAG00000002540	ddx6	99	90.871	ENSMALG00000009308	ddx6	99	91.494	Monopterus_albus
ENSCVAG00000002540	ddx6	99	84.025	MGP_CAROLIEiJ_G0032122	Ddx6	99	84.025	Mus_caroli
ENSCVAG00000002540	ddx6	99	87.759	ENSMUSG00000032097	Ddx6	99	87.759	Mus_musculus
ENSCVAG00000002540	ddx6	99	87.344	MGP_PahariEiJ_G0014991	Ddx6	99	87.552	Mus_pahari
ENSCVAG00000002540	ddx6	99	88.174	ENSMPUG00000004857	DDX6	99	88.174	Mustela_putorius_furo
ENSCVAG00000002540	ddx6	99	87.967	ENSMLUG00000003671	DDX6	99	88.174	Myotis_lucifugus
ENSCVAG00000002540	ddx6	99	88.150	ENSNGAG00000016848	Ddx6	99	88.150	Nannospalax_galili
ENSCVAG00000002540	ddx6	99	86.486	ENSNBRG00000003507	ddx6	99	86.486	Neolamprologus_brichardi
ENSCVAG00000002540	ddx6	99	88.382	ENSNLEG00000007372	DDX6	99	88.382	Nomascus_leucogenys
ENSCVAG00000002540	ddx6	99	78.008	ENSMEUG00000010556	DDX6	99	78.261	Notamacropus_eugenii
ENSCVAG00000002540	ddx6	62	90.672	ENSOPRG00000016112	DDX6	100	71.867	Ochotona_princeps
ENSCVAG00000002540	ddx6	99	87.967	ENSODEG00000007950	DDX6	99	87.967	Octodon_degus
ENSCVAG00000002540	ddx6	99	95.833	ENSONIG00000005756	ddx6	99	95.833	Oreochromis_niloticus
ENSCVAG00000002540	ddx6	89	91.080	ENSOANG00000003751	DDX6	99	91.080	Ornithorhynchus_anatinus
ENSCVAG00000002540	ddx6	99	88.174	ENSOCUG00000005849	DDX6	99	88.174	Oryctolagus_cuniculus
ENSCVAG00000002540	ddx6	99	94.781	ENSORLG00000002506	ddx6	99	94.781	Oryzias_latipes
ENSCVAG00000002540	ddx6	99	94.990	ENSORLG00020016534	ddx6	99	94.990	Oryzias_latipes_hni
ENSCVAG00000002540	ddx6	99	94.979	ENSORLG00015005301	ddx6	99	94.979	Oryzias_latipes_hsok
ENSCVAG00000002540	ddx6	99	95.188	ENSOMEG00000001347	ddx6	99	95.188	Oryzias_melastigma
ENSCVAG00000002540	ddx6	99	88.174	ENSOGAG00000007978	DDX6	99	88.174	Otolemur_garnettii
ENSCVAG00000002540	ddx6	99	87.759	ENSOARG00000011455	DDX6	99	87.759	Ovis_aries
ENSCVAG00000002540	ddx6	99	62.762	ENSPPAG00000039963	-	99	63.048	Pan_paniscus
ENSCVAG00000002540	ddx6	99	88.382	ENSPPAG00000034894	DDX6	99	88.382	Pan_paniscus
ENSCVAG00000002540	ddx6	99	70.954	ENSPPAG00000040387	-	99	70.954	Pan_paniscus
ENSCVAG00000002540	ddx6	99	88.174	ENSPPRG00000009039	DDX6	99	88.174	Panthera_pardus
ENSCVAG00000002540	ddx6	99	88.174	ENSPTIG00000018551	DDX6	99	88.174	Panthera_tigris_altaica
ENSCVAG00000002540	ddx6	99	70.747	ENSPTRG00000050136	-	99	70.747	Pan_troglodytes
ENSCVAG00000002540	ddx6	99	88.382	ENSPTRG00000004353	DDX6	99	88.382	Pan_troglodytes
ENSCVAG00000002540	ddx6	99	63.598	ENSPTRG00000043896	-	99	63.883	Pan_troglodytes
ENSCVAG00000002540	ddx6	99	88.382	ENSPANG00000018963	DDX6	99	88.382	Papio_anubis
ENSCVAG00000002540	ddx6	99	91.925	ENSPKIG00000013728	ddx6	99	91.925	Paramormyrops_kingsleyae
ENSCVAG00000002540	ddx6	99	86.392	ENSPSIG00000013230	DDX6	99	86.392	Pelodiscus_sinensis
ENSCVAG00000002540	ddx6	99	82.292	ENSPMGG00000023707	ddx6	99	82.292	Periophthalmus_magnuspinnatus
ENSCVAG00000002540	ddx6	99	78.144	ENSPMAG00000007168	ddx6	99	78.144	Petromyzon_marinus
ENSCVAG00000002540	ddx6	100	97.303	ENSPFOG00000010555	ddx6	100	97.303	Poecilia_formosa
ENSCVAG00000002540	ddx6	100	97.510	ENSPLAG00000019684	ddx6	100	97.510	Poecilia_latipinna
ENSCVAG00000002540	ddx6	100	97.303	ENSPMEG00000019775	ddx6	100	97.303	Poecilia_mexicana
ENSCVAG00000002540	ddx6	100	97.510	ENSPREG00000016082	ddx6	100	97.510	Poecilia_reticulata
ENSCVAG00000002540	ddx6	99	85.477	ENSPPYG00000003942	DDX6	99	85.477	Pongo_abelii
ENSCVAG00000002540	ddx6	99	78.838	ENSPCAG00000004767	DDX6	99	78.838	Procavia_capensis
ENSCVAG00000002540	ddx6	99	88.174	ENSPCOG00000020762	DDX6	99	88.174	Propithecus_coquereli
ENSCVAG00000002540	ddx6	99	80.498	ENSPVAG00000005421	DDX6	99	80.498	Pteropus_vampyrus
ENSCVAG00000002540	ddx6	99	95.426	ENSPNYG00000008538	ddx6	99	95.426	Pundamilia_nyererei
ENSCVAG00000002540	ddx6	99	77.778	ENSPNAG00000010102	ddx6	99	77.778	Pygocentrus_nattereri
ENSCVAG00000002540	ddx6	99	87.552	ENSRNOG00000053932	Ddx6	99	87.552	Rattus_norvegicus
ENSCVAG00000002540	ddx6	99	63.918	ENSRBIG00000038129	-	99	63.918	Rhinopithecus_bieti
ENSCVAG00000002540	ddx6	99	88.382	ENSRBIG00000032545	DDX6	99	88.382	Rhinopithecus_bieti
ENSCVAG00000002540	ddx6	99	61.925	ENSRBIG00000027933	-	99	62.552	Rhinopithecus_bieti
ENSCVAG00000002540	ddx6	99	64.854	ENSRROG00000034419	-	99	65.690	Rhinopithecus_roxellana
ENSCVAG00000002540	ddx6	99	88.382	ENSRROG00000032478	DDX6	99	88.382	Rhinopithecus_roxellana
ENSCVAG00000002540	ddx6	99	64.182	ENSRROG00000032664	-	99	64.182	Rhinopithecus_roxellana
ENSCVAG00000002540	ddx6	99	88.174	ENSSBOG00000029671	DDX6	99	88.174	Saimiri_boliviensis_boliviensis
ENSCVAG00000002540	ddx6	99	88.174	ENSSHAG00000011424	DDX6	99	88.174	Sarcophilus_harrisii
ENSCVAG00000002540	ddx6	83	50.000	ENSSFOG00015005998	DDX6	97	49.432	Scleropages_formosus
ENSCVAG00000002540	ddx6	99	91.718	ENSSFOG00015023211	ddx6	99	91.718	Scleropages_formosus
ENSCVAG00000002540	ddx6	99	95.228	ENSSMAG00000001253	ddx6	99	95.228	Scophthalmus_maximus
ENSCVAG00000002540	ddx6	99	96.058	ENSSDUG00000019695	ddx6	99	96.058	Seriola_dumerili
ENSCVAG00000002540	ddx6	99	96.058	ENSSLDG00000006167	ddx6	99	96.058	Seriola_lalandi_dorsalis
ENSCVAG00000002540	ddx6	99	88.174	ENSSARG00000003219	DDX6	99	88.174	Sorex_araneus
ENSCVAG00000002540	ddx6	87	89.713	ENSSPUG00000004404	DDX6	92	89.713	Sphenodon_punctatus
ENSCVAG00000002540	ddx6	99	96.266	ENSSPAG00000023258	ddx6	99	96.266	Stegastes_partitus
ENSCVAG00000002540	ddx6	99	88.382	ENSSSCG00000015097	DDX6	99	88.382	Sus_scrofa
ENSCVAG00000002540	ddx6	95	86.710	ENSTGUG00000017360	DDX6	100	86.710	Taeniopygia_guttata
ENSCVAG00000002540	ddx6	99	93.971	ENSTRUG00000011848	ddx6	99	93.971	Takifugu_rubripes
ENSCVAG00000002540	ddx6	99	94.595	ENSTNIG00000016295	ddx6	99	94.595	Tetraodon_nigroviridis
ENSCVAG00000002540	ddx6	99	85.062	ENSTTRG00000004313	DDX6	99	85.062	Tursiops_truncatus
ENSCVAG00000002540	ddx6	99	88.174	ENSUAMG00000027749	DDX6	99	88.174	Ursus_americanus
ENSCVAG00000002540	ddx6	99	88.174	ENSUMAG00000000993	DDX6	99	88.174	Ursus_maritimus
ENSCVAG00000002540	ddx6	99	86.100	ENSVPAG00000005601	DDX6	99	86.100	Vicugna_pacos
ENSCVAG00000002540	ddx6	99	87.759	ENSVVUG00000024121	DDX6	99	87.759	Vulpes_vulpes
ENSCVAG00000002540	ddx6	99	88.309	ENSXETG00000010061	ddx6	99	88.518	Xenopus_tropicalis
ENSCVAG00000002540	ddx6	100	89.419	ENSXCOG00000008560	ddx6	100	89.627	Xiphophorus_couchianus
ENSCVAG00000002540	ddx6	100	96.888	ENSXMAG00000007620	ddx6	100	96.888	Xiphophorus_maculatus