EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002612 (Gene tree)
Gene ID: 107094602
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3651 bases
Position: chrKL652993.1:4772-8422
Accession: 107094602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001619	MRP-S32	PF10210.9	6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013122	-	726	XM_015390323	ENSCVAP00000001619	145 (aa)	XP_015245809	UPI0007428412

Gene Model

Click here to download ENSCVAG00000002612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002612	mrpl42	100	76.712	ENSAPOG00000010677	mrpl42	100	76.712	Acanthochromis_polyacanthus
ENSCVAG00000002612	mrpl42	100	77.241	ENSAOCG00000011620	mrpl42	100	77.241	Amphiprion_ocellaris
ENSCVAG00000002612	mrpl42	100	77.241	ENSAPEG00000019516	mrpl42	100	77.241	Amphiprion_percula
ENSCVAG00000002612	mrpl42	90	77.099	ENSATEG00000014106	mrpl42	100	77.099	Anabas_testudineus
ENSCVAG00000002612	mrpl42	71	67.961	ENSACAG00000012606	MRPL42	71	67.961	Anolis_carolinensis
ENSCVAG00000002612	mrpl42	100	74.483	ENSACLG00000026856	mrpl42	100	74.483	Astatotilapia_calliptera
ENSCVAG00000002612	mrpl42	68	58.163	ENSAMXG00000035149	mrpl42	72	58.163	Astyanax_mexicanus
ENSCVAG00000002612	mrpl42	99	65.035	ENSCSEG00000010067	mrpl42	98	65.035	Cynoglossus_semilaevis
ENSCVAG00000002612	mrpl42	100	56.552	ENSDARG00000079391	mrpl42	100	56.552	Danio_rerio
ENSCVAG00000002612	mrpl42	71	48.624	ENSEBUG00000005581	mrpl42	81	48.624	Eptatretus_burgeri
ENSCVAG00000002612	mrpl42	99	63.889	ENSELUG00000001973	mrpl42	99	63.889	Esox_lucius
ENSCVAG00000002612	mrpl42	100	82.069	ENSFHEG00000018696	mrpl42	100	82.069	Fundulus_heteroclitus
ENSCVAG00000002612	mrpl42	67	81.443	ENSGMOG00000002972	mrpl42	100	81.443	Gadus_morhua
ENSCVAG00000002612	mrpl42	100	85.517	ENSGAFG00000018373	mrpl42	100	85.517	Gambusia_affinis
ENSCVAG00000002612	mrpl42	66	81.250	ENSGACG00000018811	mrpl42	99	81.250	Gasterosteus_aculeatus
ENSCVAG00000002612	mrpl42	100	73.793	ENSHBUG00000015960	mrpl42	100	73.793	Haplochromis_burtoni
ENSCVAG00000002612	mrpl42	100	65.068	ENSHCOG00000014046	mrpl42	100	65.068	Hippocampus_comes
ENSCVAG00000002612	mrpl42	92	53.623	ENSIPUG00000015395	mrpl42	92	53.623	Ictalurus_punctatus
ENSCVAG00000002612	mrpl42	100	76.552	ENSKMAG00000013671	mrpl42	100	76.552	Kryptolebias_marmoratus
ENSCVAG00000002612	mrpl42	100	71.034	ENSLBEG00000028618	mrpl42	99	71.034	Labrus_bergylta
ENSCVAG00000002612	mrpl42	50	72.222	ENSLOCG00000015284	mrpl42	57	72.222	Lepisosteus_oculatus
ENSCVAG00000002612	mrpl42	100	79.310	ENSMAMG00000009737	mrpl42	100	79.310	Mastacembelus_armatus
ENSCVAG00000002612	mrpl42	100	74.483	ENSMZEG00005008545	mrpl42	96	74.483	Maylandia_zebra
ENSCVAG00000002612	mrpl42	83	64.167	ENSMMOG00000002317	mrpl42	79	64.167	Mola_mola
ENSCVAG00000002612	mrpl42	100	67.097	ENSMALG00000015794	mrpl42	96	67.097	Monopterus_albus
ENSCVAG00000002612	mrpl42	100	73.103	ENSNBRG00000003307	mrpl42	100	73.103	Neolamprologus_brichardi
ENSCVAG00000002612	mrpl42	100	73.793	ENSONIG00000011753	mrpl42	100	73.793	Oreochromis_niloticus
ENSCVAG00000002612	mrpl42	92	50.370	ENSOANG00000019984	-	91	50.370	Ornithorhynchus_anatinus
ENSCVAG00000002612	mrpl42	100	71.918	ENSORLG00000013500	mrpl42	85	71.918	Oryzias_latipes
ENSCVAG00000002612	mrpl42	100	74.830	ENSORLG00020000548	mrpl42	100	74.830	Oryzias_latipes_hni
ENSCVAG00000002612	mrpl42	100	71.034	ENSORLG00015016984	mrpl42	100	71.034	Oryzias_latipes_hsok
ENSCVAG00000002612	mrpl42	100	73.103	ENSOMEG00000010700	mrpl42	100	73.103	Oryzias_melastigma
ENSCVAG00000002612	mrpl42	100	63.014	ENSPKIG00000025457	mrpl42	100	63.014	Paramormyrops_kingsleyae
ENSCVAG00000002612	mrpl42	86	61.905	ENSPMGG00000019705	mrpl42	89	61.905	Periophthalmus_magnuspinnatus
ENSCVAG00000002612	mrpl42	71	53.774	ENSPMAG00000008091	mrpl42	68	53.774	Petromyzon_marinus
ENSCVAG00000002612	mrpl42	100	85.517	ENSPFOG00000016539	mrpl42	99	85.517	Poecilia_formosa
ENSCVAG00000002612	mrpl42	100	86.207	ENSPLAG00000001255	mrpl42	100	86.207	Poecilia_latipinna
ENSCVAG00000002612	mrpl42	100	85.517	ENSPMEG00000016462	mrpl42	100	85.517	Poecilia_mexicana
ENSCVAG00000002612	mrpl42	94	75.000	ENSPREG00000012053	mrpl42	100	75.000	Poecilia_reticulata
ENSCVAG00000002612	mrpl42	100	74.483	ENSPNYG00000009586	mrpl42	100	74.483	Pundamilia_nyererei
ENSCVAG00000002612	mrpl42	98	53.061	ENSPNAG00000020753	mrpl42	97	53.061	Pygocentrus_nattereri
ENSCVAG00000002612	mrpl42	100	71.724	ENSSMAG00000000262	mrpl42	100	71.724	Scophthalmus_maximus
ENSCVAG00000002612	mrpl42	100	75.862	ENSSDUG00000005949	mrpl42	100	75.862	Seriola_dumerili
ENSCVAG00000002612	mrpl42	100	73.793	ENSSLDG00000010159	mrpl42	100	73.793	Seriola_lalandi_dorsalis
ENSCVAG00000002612	mrpl42	100	68.276	ENSTRUG00000025949	mrpl42	99	68.276	Takifugu_rubripes
ENSCVAG00000002612	mrpl42	79	59.130	ENSXETG00000032902	mrpl42	92	59.130	Xenopus_tropicalis
ENSCVAG00000002612	mrpl42	100	74.150	ENSXCOG00000013875	mrpl42	98	74.150	Xiphophorus_couchianus