EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002640 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10338 bases
Position: chrKL653182.1:119387-129724
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001628	R3H	PF01424.22	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013099	-	1104	-	ENSCVAP00000001628	367 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002640	r3hcc1	98	32.258	ENSG00000104679	R3HCC1	99	30.303	Homo_sapiens
ENSCVAG00000002640	r3hcc1	95	49.153	ENSAPOG00000003616	r3hcc1	77	49.157	Acanthochromis_polyacanthus
ENSCVAG00000002640	r3hcc1	95	30.871	ENSAMEG00000002963	R3HCC1	75	31.662	Ailuropoda_melanoleuca
ENSCVAG00000002640	r3hcc1	97	50.382	ENSACIG00000017144	r3hcc1	98	57.485	Amphilophus_citrinellus
ENSCVAG00000002640	r3hcc1	94	46.974	ENSAOCG00000003945	r3hcc1	86	48.895	Amphiprion_ocellaris
ENSCVAG00000002640	r3hcc1	94	47.863	ENSAPEG00000003613	r3hcc1	86	49.171	Amphiprion_percula
ENSCVAG00000002640	r3hcc1	90	53.757	ENSATEG00000023860	r3hcc1	82	54.360	Anabas_testudineus
ENSCVAG00000002640	r3hcc1	96	34.211	ENSACAG00000016627	R3HCC1	82	34.048	Anolis_carolinensis
ENSCVAG00000002640	r3hcc1	98	32.992	ENSANAG00000036169	R3HCC1	84	31.877	Aotus_nancymaae
ENSCVAG00000002640	r3hcc1	95	33.684	ENSBTAG00000025830	R3HCC1	79	33.069	Bos_taurus
ENSCVAG00000002640	r3hcc1	98	31.830	ENSCJAG00000020118	R3HCC1	84	30.894	Callithrix_jacchus
ENSCVAG00000002640	r3hcc1	95	31.746	ENSCAFG00000009210	R3HCC1	78	32.895	Canis_familiaris
ENSCVAG00000002640	r3hcc1	96	31.250	ENSCAFG00020012870	R3HCC1	85	32.642	Canis_lupus_dingo
ENSCVAG00000002640	r3hcc1	95	30.871	ENSCHIG00000009107	R3HCC1	81	31.662	Capra_hircus
ENSCVAG00000002640	r3hcc1	95	31.300	ENSTSYG00000000511	R3HCC1	63	32.095	Carlito_syrichta
ENSCVAG00000002640	r3hcc1	98	31.234	ENSCCAG00000037811	R3HCC1	84	31.362	Cebus_capucinus
ENSCVAG00000002640	r3hcc1	98	32.474	ENSCATG00000032971	R3HCC1	84	33.425	Cercocebus_atys
ENSCVAG00000002640	r3hcc1	98	33.418	ENSCLAG00000015556	R3HCC1	72	34.430	Chinchilla_lanigera
ENSCVAG00000002640	r3hcc1	98	31.525	ENSCSAG00000016250	R3HCC1	79	31.969	Chlorocebus_sabaeus
ENSCVAG00000002640	r3hcc1	98	30.711	ENSCHOG00000000396	R3HCC1	83	31.472	Choloepus_hoffmanni
ENSCVAG00000002640	r3hcc1	98	32.880	ENSCANG00000029441	R3HCC1	84	30.894	Colobus_angolensis_palliatus
ENSCVAG00000002640	r3hcc1	93	48.889	ENSCSEG00000005748	r3hcc1	83	48.889	Cynoglossus_semilaevis
ENSCVAG00000002640	r3hcc1	96	36.842	ENSDARG00000099593	r3hcc1	83	36.842	Danio_rerio
ENSCVAG00000002640	r3hcc1	98	30.769	ENSDNOG00000007168	R3HCC1	79	31.026	Dasypus_novemcinctus
ENSCVAG00000002640	r3hcc1	95	31.733	ENSEASG00005018782	R3HCC1	66	32.267	Equus_asinus_asinus
ENSCVAG00000002640	r3hcc1	95	31.733	ENSECAG00000025013	R3HCC1	80	32.267	Equus_caballus
ENSCVAG00000002640	r3hcc1	90	41.341	ENSELUG00000023650	r3hcc1	84	41.341	Esox_lucius
ENSCVAG00000002640	r3hcc1	95	32.873	ENSFCAG00000012395	R3HCC1	79	32.000	Felis_catus
ENSCVAG00000002640	r3hcc1	75	36.207	ENSFALG00000001646	R3HCC1	50	36.313	Ficedula_albicollis
ENSCVAG00000002640	r3hcc1	95	31.169	ENSFDAG00000001572	R3HCC1	82	31.510	Fukomys_damarensis
ENSCVAG00000002640	r3hcc1	96	37.394	ENSGMOG00000017590	-	82	37.394	Gadus_morhua
ENSCVAG00000002640	r3hcc1	96	63.842	ENSGAFG00000008747	-	77	63.842	Gambusia_affinis
ENSCVAG00000002640	r3hcc1	96	51.811	ENSGACG00000008447	r3hcc1	81	51.811	Gasterosteus_aculeatus
ENSCVAG00000002640	r3hcc1	98	31.633	ENSGGOG00000013817	R3HCC1	86	31.888	Gorilla_gorilla
ENSCVAG00000002640	r3hcc1	70	58.065	ENSHBUG00000022250	-	81	58.065	Haplochromis_burtoni
ENSCVAG00000002640	r3hcc1	95	32.162	ENSHGLG00000010517	R3HCC1	75	32.000	Heterocephalus_glaber_female
ENSCVAG00000002640	r3hcc1	95	32.162	ENSHGLG00100006388	R3HCC1	75	32.000	Heterocephalus_glaber_male
ENSCVAG00000002640	r3hcc1	96	44.350	ENSHCOG00000011745	r3hcc1	77	44.693	Hippocampus_comes
ENSCVAG00000002640	r3hcc1	96	37.430	ENSIPUG00000024504	r3hcc1	73	39.106	Ictalurus_punctatus
ENSCVAG00000002640	r3hcc1	72	40.476	ENSSTOG00000027130	R3HCC1	56	40.476	Ictidomys_tridecemlineatus
ENSCVAG00000002640	r3hcc1	63	40.230	ENSJJAG00000013075	R3hcc1	83	31.250	Jaculus_jaculus
ENSCVAG00000002640	r3hcc1	90	54.734	ENSKMAG00000000286	r3hcc1	83	54.572	Kryptolebias_marmoratus
ENSCVAG00000002640	r3hcc1	74	42.056	ENSLACG00000011894	R3HCC1	61	42.056	Latimeria_chalumnae
ENSCVAG00000002640	r3hcc1	96	40.106	ENSLOCG00000015442	r3hcc1	83	39.944	Lepisosteus_oculatus
ENSCVAG00000002640	r3hcc1	98	32.329	ENSMFAG00000032894	R3HCC1	84	31.165	Macaca_fascicularis
ENSCVAG00000002640	r3hcc1	98	32.474	ENSMMUG00000016655	R3HCC1	84	31.165	Macaca_mulatta
ENSCVAG00000002640	r3hcc1	98	32.615	ENSMNEG00000043283	R3HCC1	84	32.249	Macaca_nemestrina
ENSCVAG00000002640	r3hcc1	98	31.818	ENSMLEG00000030147	R3HCC1	84	31.707	Mandrillus_leucophaeus
ENSCVAG00000002640	r3hcc1	90	49.855	ENSMAMG00000018146	r3hcc1	83	51.304	Mastacembelus_armatus
ENSCVAG00000002640	r3hcc1	98	32.199	ENSMGAG00000001356	R3HCC1	79	32.199	Meleagris_gallopavo
ENSCVAG00000002640	r3hcc1	95	33.598	ENSMICG00000011146	R3HCC1	77	33.598	Microcebus_murinus
ENSCVAG00000002640	r3hcc1	90	36.905	ENSMOCG00000018508	R3hcc1	84	30.144	Microtus_ochrogaster
ENSCVAG00000002640	r3hcc1	90	49.271	ENSMALG00000000731	r3hcc1	83	49.563	Monopterus_albus
ENSCVAG00000002640	r3hcc1	95	30.997	ENSMPUG00000003457	R3HCC1	71	31.536	Mustela_putorius_furo
ENSCVAG00000002640	r3hcc1	97	43.011	ENSNBRG00000016975	-	84	43.011	Neolamprologus_brichardi
ENSCVAG00000002640	r3hcc1	98	32.242	ENSNLEG00000015944	R3HCC1	81	32.746	Nomascus_leucogenys
ENSCVAG00000002640	r3hcc1	98	32.898	ENSMEUG00000010587	R3HCC1	85	33.159	Notamacropus_eugenii
ENSCVAG00000002640	r3hcc1	98	32.199	ENSOPRG00000013390	R3HCC1	82	33.073	Ochotona_princeps
ENSCVAG00000002640	r3hcc1	98	31.265	ENSODEG00000007529	R3HCC1	87	31.981	Octodon_degus
ENSCVAG00000002640	r3hcc1	98	30.909	ENSOANG00000013877	R3HCC1	79	33.515	Ornithorhynchus_anatinus
ENSCVAG00000002640	r3hcc1	98	31.267	ENSOCUG00000023554	R3HCC1	73	31.217	Oryctolagus_cuniculus
ENSCVAG00000002640	r3hcc1	94	46.110	ENSORLG00000016816	r3hcc1	85	45.763	Oryzias_latipes
ENSCVAG00000002640	r3hcc1	94	45.533	ENSORLG00020012005	r3hcc1	85	45.198	Oryzias_latipes_hni
ENSCVAG00000002640	r3hcc1	94	46.110	ENSORLG00015007018	r3hcc1	85	45.763	Oryzias_latipes_hsok
ENSCVAG00000002640	r3hcc1	90	47.761	ENSOMEG00000000816	r3hcc1	82	47.761	Oryzias_melastigma
ENSCVAG00000002640	r3hcc1	95	32.615	ENSOGAG00000001291	R3HCC1	75	33.333	Otolemur_garnettii
ENSCVAG00000002640	r3hcc1	95	30.628	ENSOARG00000010146	R3HCC1	79	31.152	Ovis_aries
ENSCVAG00000002640	r3hcc1	98	32.095	ENSPPAG00000033165	R3HCC1	86	31.959	Pan_paniscus
ENSCVAG00000002640	r3hcc1	95	32.000	ENSPPRG00000002522	R3HCC1	82	31.733	Panthera_pardus
ENSCVAG00000002640	r3hcc1	84	32.544	ENSPTIG00000011230	R3HCC1	77	32.249	Panthera_tigris_altaica
ENSCVAG00000002640	r3hcc1	98	31.313	ENSPTRG00000020076	R3HCC1	85	30.769	Pan_troglodytes
ENSCVAG00000002640	r3hcc1	98	32.216	ENSPANG00000000453	R3HCC1	84	31.781	Papio_anubis
ENSCVAG00000002640	r3hcc1	87	41.018	ENSPKIG00000020397	-	80	41.018	Paramormyrops_kingsleyae
ENSCVAG00000002640	r3hcc1	86	40.439	ENSPKIG00000014426	-	77	40.439	Paramormyrops_kingsleyae
ENSCVAG00000002640	r3hcc1	98	33.671	ENSPSIG00000017664	R3HCC1	85	34.177	Pelodiscus_sinensis
ENSCVAG00000002640	r3hcc1	95	30.516	ENSPEMG00000007118	R3hcc1	84	30.456	Peromyscus_maniculatus_bairdii
ENSCVAG00000002640	r3hcc1	84	32.249	ENSPCIG00000022718	-	72	32.033	Phascolarctos_cinereus
ENSCVAG00000002640	r3hcc1	96	64.225	ENSPFOG00000022301	r3hcc1	78	64.225	Poecilia_formosa
ENSCVAG00000002640	r3hcc1	96	64.972	ENSPLAG00000010794	r3hcc1	78	64.789	Poecilia_latipinna
ENSCVAG00000002640	r3hcc1	96	64.225	ENSPMEG00000022515	r3hcc1	78	64.225	Poecilia_mexicana
ENSCVAG00000002640	r3hcc1	96	66.102	ENSPREG00000000713	r3hcc1	77	66.102	Poecilia_reticulata
ENSCVAG00000002640	r3hcc1	88	32.194	ENSPPYG00000018436	R3HCC1	84	32.194	Pongo_abelii
ENSCVAG00000002640	r3hcc1	67	43.678	ENSPCAG00000012229	R3HCC1	56	43.678	Procavia_capensis
ENSCVAG00000002640	r3hcc1	98	33.586	ENSPCOG00000027554	R3HCC1	86	34.091	Propithecus_coquereli
ENSCVAG00000002640	r3hcc1	95	32.181	ENSPVAG00000009829	R3HCC1	79	32.713	Pteropus_vampyrus
ENSCVAG00000002640	r3hcc1	94	39.017	ENSPNAG00000023875	r3hcc1	85	39.884	Pygocentrus_nattereri
ENSCVAG00000002640	r3hcc1	98	32.323	ENSRBIG00000028045	R3HCC1	86	33.081	Rhinopithecus_bieti
ENSCVAG00000002640	r3hcc1	98	32.323	ENSRROG00000031126	R3HCC1	84	30.894	Rhinopithecus_roxellana
ENSCVAG00000002640	r3hcc1	95	33.158	ENSSBOG00000022590	R3HCC1	82	33.421	Saimiri_boliviensis_boliviensis
ENSCVAG00000002640	r3hcc1	91	40.580	ENSSFOG00015013507	r3hcc1	84	40.580	Scleropages_formosus
ENSCVAG00000002640	r3hcc1	92	51.831	ENSSMAG00000008647	r3hcc1	86	51.831	Scophthalmus_maximus
ENSCVAG00000002640	r3hcc1	96	54.372	ENSSDUG00000022786	r3hcc1	84	55.707	Seriola_dumerili
ENSCVAG00000002640	r3hcc1	96	53.825	ENSSLDG00000019031	r3hcc1	84	55.163	Seriola_lalandi_dorsalis
ENSCVAG00000002640	r3hcc1	94	48.433	ENSSPAG00000013497	r3hcc1	83	48.433	Stegastes_partitus
ENSCVAG00000002640	r3hcc1	98	31.566	ENSSSCG00000039915	-	80	32.323	Sus_scrofa
ENSCVAG00000002640	r3hcc1	95	44.382	ENSTRUG00000015880	r3hcc1	83	44.382	Takifugu_rubripes
ENSCVAG00000002640	r3hcc1	93	31.806	ENSTTRG00000012247	R3HCC1	78	33.784	Tursiops_truncatus
ENSCVAG00000002640	r3hcc1	95	31.383	ENSUAMG00000007344	R3HCC1	81	32.181	Ursus_americanus
ENSCVAG00000002640	r3hcc1	95	31.266	ENSVVUG00000005056	R3HCC1	78	32.300	Vulpes_vulpes
ENSCVAG00000002640	r3hcc1	87	63.125	ENSXCOG00000017626	r3hcc1	71	63.750	Xiphophorus_couchianus
ENSCVAG00000002640	r3hcc1	96	65.537	ENSXMAG00000018375	r3hcc1	77	66.102	Xiphophorus_maculatus