EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000002649 (Gene tree)
Gene ID: 107090634
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: RANBP2-type and C3HC4-type zinc finger containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9221 bases
Position: chrKL652805.1:209231-218451
Accession: 107090634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000020932	zf-RanBP	PF00641.18	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013073	-	3256	XM_015384138	ENSCVAP00000020932	516 (aa)	XP_015239624	UPI000742559F

Gene Model

Click here to download ENSCVAG00000002649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000002649	rbck1	98	43.785	ENSCVAG00000007250	shrprbck1r	76	43.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002649	rbck1	100	76.731	ENSACLG00000020380	rbck1	100	76.731	Astatotilapia_calliptera
ENSCVAG00000002649	rbck1	98	58.708	ENSAMXG00000004941	rbck1	98	58.708	Astyanax_mexicanus
ENSCVAG00000002649	rbck1	98	64.971	ENSELUG00000022786	rbck1	96	63.601	Esox_lucius
ENSCVAG00000002649	rbck1	100	82.171	ENSFHEG00000016918	rbck1	100	81.977	Fundulus_heteroclitus
ENSCVAG00000002649	rbck1	100	76.731	ENSHBUG00000008208	rbck1	100	76.731	Haplochromis_burtoni
ENSCVAG00000002649	rbck1	100	76.923	ENSMZEG00005005317	rbck1	100	76.923	Maylandia_zebra
ENSCVAG00000002649	rbck1	84	74.253	ENSNBRG00000006179	rbck1	90	73.563	Neolamprologus_brichardi
ENSCVAG00000002649	rbck1	98	76.969	ENSONIG00000006803	rbck1	99	76.378	Oreochromis_niloticus
ENSCVAG00000002649	rbck1	97	77.075	ENSPNYG00000012666	rbck1	98	77.075	Pundamilia_nyererei
ENSCVAG00000002649	rbck1	100	76.426	ENSSDUG00000023631	rbck1	100	76.806	Seriola_dumerili
ENSCVAG00000002649	rbck1	100	76.000	ENSSLDG00000008305	rbck1	100	76.952	Seriola_lalandi_dorsalis
ENSCVAG00000002649	rbck1	100	75.382	ENSSPAG00000009432	rbck1	100	75.763	Stegastes_partitus