EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000002687 (Gene tree)
Gene ID: -
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 129724 bases
Position: chrKL652676.1:640034-769757
Accession: 107087236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001667	RRM_1	PF00076.22	1.8e-35	1	3
ENSCVAP00000001667	RRM_1	PF00076.22	1.8e-35	2	3
ENSCVAP00000001667	RRM_1	PF00076.22	1.8e-35	3	3
ENSCVAP00000001675	RRM_1	PF00076.22	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013019	-	3735	XM_015378696	ENSCVAP00000001675	665 (aa)	XP_015234182	-
ENSCVAT00000013029	-	1305	-	ENSCVAP00000001667	434 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000002687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000002687	raver2	77	57.910	ENSCVAG00000013971	raver1	51	53.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002687	raver2	85	58.421	ENSG00000162437	RAVER2	86	42.484	Homo_sapiens
ENSCVAG00000002687	raver2	89	89.796	ENSAPOG00000002766	raver2	74	78.313	Acanthochromis_polyacanthus
ENSCVAG00000002687	raver2	82	58.856	ENSAMEG00000015178	RAVER2	58	58.856	Ailuropoda_melanoleuca
ENSCVAG00000002687	raver2	54	94.444	ENSACIG00000012229	-	78	94.348	Amphilophus_citrinellus
ENSCVAG00000002687	raver2	54	88.034	ENSAOCG00000010129	-	80	87.826	Amphiprion_ocellaris
ENSCVAG00000002687	raver2	54	88.034	ENSAPEG00000010843	-	80	87.826	Amphiprion_percula
ENSCVAG00000002687	raver2	91	89.356	ENSATEG00000019679	raver2	98	82.599	Anabas_testudineus
ENSCVAG00000002687	raver2	78	53.803	ENSAPLG00000013160	RAVER2	58	53.803	Anas_platyrhynchos
ENSCVAG00000002687	raver2	83	56.757	ENSACAG00000008443	RAVER2	51	56.757	Anolis_carolinensis
ENSCVAG00000002687	raver2	85	57.895	ENSANAG00000025857	RAVER2	55	57.895	Aotus_nancymaae
ENSCVAG00000002687	raver2	99	83.058	ENSACLG00000001840	raver2	80	77.961	Astatotilapia_calliptera
ENSCVAG00000002687	raver2	89	76.982	ENSAMXG00000010570	raver2	76	57.709	Astyanax_mexicanus
ENSCVAG00000002687	raver2	85	58.421	ENSBTAG00000030686	RAVER2	58	58.421	Bos_taurus
ENSCVAG00000002687	raver2	85	58.065	ENSCJAG00000016724	RAVER2	54	57.909	Callithrix_jacchus
ENSCVAG00000002687	raver2	68	55.410	ENSCAFG00000018617	RAVER2	54	55.410	Canis_familiaris
ENSCVAG00000002687	raver2	85	58.311	ENSCAFG00020018120	RAVER2	55	58.311	Canis_lupus_dingo
ENSCVAG00000002687	raver2	85	57.895	ENSCHIG00000005514	RAVER2	56	57.895	Capra_hircus
ENSCVAG00000002687	raver2	77	57.101	ENSTSYG00000006019	RAVER2	50	57.101	Carlito_syrichta
ENSCVAG00000002687	raver2	64	58.423	ENSCAPG00000013527	RAVER2	79	58.423	Cavia_aperea
ENSCVAG00000002687	raver2	87	56.812	ENSCCAG00000029834	RAVER2	56	56.812	Cebus_capucinus
ENSCVAG00000002687	raver2	85	57.796	ENSCATG00000040658	RAVER2	62	58.217	Cercocebus_atys
ENSCVAG00000002687	raver2	64	61.733	ENSCLAG00000006590	RAVER2	62	35.392	Chinchilla_lanigera
ENSCVAG00000002687	raver2	82	58.217	ENSCSAG00000001350	RAVER2	57	58.217	Chlorocebus_sabaeus
ENSCVAG00000002687	raver2	86	53.247	ENSCHOG00000007668	RAVER2	56	53.247	Choloepus_hoffmanni
ENSCVAG00000002687	raver2	86	58.182	ENSCPBG00000001015	RAVER2	51	58.182	Chrysemys_picta_bellii
ENSCVAG00000002687	raver2	85	58.333	ENSCANG00000042311	RAVER2	58	58.333	Colobus_angolensis_palliatus
ENSCVAG00000002687	raver2	90	55.388	ENSCGRG00001011852	Raver2	56	58.311	Cricetulus_griseus_chok1gshd
ENSCVAG00000002687	raver2	65	63.475	ENSCGRG00000011814	-	90	63.475	Cricetulus_griseus_crigri
ENSCVAG00000002687	raver2	89	86.410	ENSCSEG00000017839	raver2	96	86.410	Cynoglossus_semilaevis
ENSCVAG00000002687	raver2	90	78.030	ENSDARG00000075034	raver2	73	57.840	Danio_rerio
ENSCVAG00000002687	raver2	85	57.632	ENSDNOG00000012130	RAVER2	55	57.632	Dasypus_novemcinctus
ENSCVAG00000002687	raver2	85	58.639	ENSDORG00000002498	Raver2	53	58.639	Dipodomys_ordii
ENSCVAG00000002687	raver2	70	58.605	ENSETEG00000000706	RAVER2	51	60.000	Echinops_telfairi
ENSCVAG00000002687	raver2	82	58.856	ENSEASG00005008158	RAVER2	58	58.856	Equus_asinus_asinus
ENSCVAG00000002687	raver2	82	58.856	ENSECAG00000022014	RAVER2	58	58.856	Equus_caballus
ENSCVAG00000002687	raver2	95	66.262	ENSELUG00000022384	raver2	86	84.753	Esox_lucius
ENSCVAG00000002687	raver2	85	58.684	ENSFCAG00000022781	RAVER2	56	58.684	Felis_catus
ENSCVAG00000002687	raver2	78	54.000	ENSFALG00000012634	RAVER2	60	54.000	Ficedula_albicollis
ENSCVAG00000002687	raver2	69	61.873	ENSFDAG00000010721	RAVER2	50	61.873	Fukomys_damarensis
ENSCVAG00000002687	raver2	99	93.807	ENSFHEG00000001322	raver2	75	93.807	Fundulus_heteroclitus
ENSCVAG00000002687	raver2	86	57.180	ENSGALG00000033759	RAVER2	51	57.106	Gallus_gallus
ENSCVAG00000002687	raver2	99	93.353	ENSGAFG00000008577	raver2	75	93.353	Gambusia_affinis
ENSCVAG00000002687	raver2	90	86.783	ENSGACG00000007122	raver2	66	86.783	Gasterosteus_aculeatus
ENSCVAG00000002687	raver2	83	59.409	ENSGAGG00000018767	RAVER2	56	59.409	Gopherus_agassizii
ENSCVAG00000002687	raver2	85	58.491	ENSGGOG00000016447	RAVER2	55	58.491	Gorilla_gorilla
ENSCVAG00000002687	raver2	99	83.208	ENSHBUG00000022983	raver2	75	82.759	Haplochromis_burtoni
ENSCVAG00000002687	raver2	71	60.968	ENSHGLG00000018409	RAVER2	69	34.690	Heterocephalus_glaber_female
ENSCVAG00000002687	raver2	63	61.818	ENSHGLG00100006640	RAVER2	94	55.758	Heterocephalus_glaber_male
ENSCVAG00000002687	raver2	90	85.570	ENSHCOG00000005933	raver2	75	71.299	Hippocampus_comes
ENSCVAG00000002687	raver2	93	72.222	ENSIPUG00000007082	raver2	58	75.835	Ictalurus_punctatus
ENSCVAG00000002687	raver2	84	55.858	ENSSTOG00000009844	RAVER2	87	55.858	Ictidomys_tridecemlineatus
ENSCVAG00000002687	raver2	89	56.533	ENSJJAG00000000374	Raver2	59	57.106	Jaculus_jaculus
ENSCVAG00000002687	raver2	99	85.650	ENSKMAG00000011656	raver2	97	86.254	Kryptolebias_marmoratus
ENSCVAG00000002687	raver2	80	91.354	ENSLBEG00000003778	raver2	98	85.789	Labrus_bergylta
ENSCVAG00000002687	raver2	99	36.296	ENSLACG00000005188	RAVER2	73	48.669	Latimeria_chalumnae
ENSCVAG00000002687	raver2	85	71.842	ENSLOCG00000006773	raver2	75	50.297	Lepisosteus_oculatus
ENSCVAG00000002687	raver2	77	56.936	ENSLAFG00000012508	RAVER2	57	56.936	Loxodonta_africana
ENSCVAG00000002687	raver2	84	57.825	ENSMFAG00000031436	RAVER2	56	57.101	Macaca_fascicularis
ENSCVAG00000002687	raver2	84	57.825	ENSMMUG00000018565	RAVER2	62	58.217	Macaca_mulatta
ENSCVAG00000002687	raver2	84	57.825	ENSMNEG00000033127	RAVER2	62	58.217	Macaca_nemestrina
ENSCVAG00000002687	raver2	77	56.973	ENSMLEG00000036310	RAVER2	56	56.973	Mandrillus_leucophaeus
ENSCVAG00000002687	raver2	93	89.552	ENSMAMG00000009059	raver2	85	92.268	Mastacembelus_armatus
ENSCVAG00000002687	raver2	99	83.358	ENSMZEG00005014386	raver2	75	82.909	Maylandia_zebra
ENSCVAG00000002687	raver2	78	55.840	ENSMGAG00000011806	RAVER2	76	37.500	Meleagris_gallopavo
ENSCVAG00000002687	raver2	89	55.949	ENSMAUG00000004248	Raver2	56	58.400	Mesocricetus_auratus
ENSCVAG00000002687	raver2	85	58.684	ENSMICG00000029259	RAVER2	60	55.718	Microcebus_murinus
ENSCVAG00000002687	raver2	84	57.600	ENSMOCG00000018087	Raver2	55	58.133	Microtus_ochrogaster
ENSCVAG00000002687	raver2	85	59.189	ENSMODG00000001242	RAVER2	54	59.189	Monodelphis_domestica
ENSCVAG00000002687	raver2	99	80.060	ENSMALG00000018093	raver2	73	79.460	Monopterus_albus
ENSCVAG00000002687	raver2	89	56.203	MGP_CAROLIEiJ_G0026202	Raver2	83	57.812	Mus_caroli
ENSCVAG00000002687	raver2	89	56.456	ENSMUSG00000035275	Raver2	82	58.839	Mus_musculus
ENSCVAG00000002687	raver2	89	56.456	MGP_PahariEiJ_G0028539	Raver2	84	58.073	Mus_pahari
ENSCVAG00000002687	raver2	89	56.456	MGP_SPRETEiJ_G0027171	Raver2	88	56.373	Mus_spretus
ENSCVAG00000002687	raver2	82	59.128	ENSMPUG00000000717	RAVER2	58	59.128	Mustela_putorius_furo
ENSCVAG00000002687	raver2	77	57.567	ENSMLUG00000007699	RAVER2	61	57.567	Myotis_lucifugus
ENSCVAG00000002687	raver2	92	55.422	ENSNGAG00000000905	Raver2	62	55.904	Nannospalax_galili
ENSCVAG00000002687	raver2	54	94.017	ENSNBRG00000014345	-	78	93.913	Neolamprologus_brichardi
ENSCVAG00000002687	raver2	79	57.514	ENSNLEG00000015145	RAVER2	56	57.514	Nomascus_leucogenys
ENSCVAG00000002687	raver2	70	59.406	ENSODEG00000005253	RAVER2	50	59.406	Octodon_degus
ENSCVAG00000002687	raver2	73	89.164	ENSONIG00000008808	raver2	76	78.289	Oreochromis_niloticus
ENSCVAG00000002687	raver2	77	57.391	ENSOANG00000008327	-	58	57.391	Ornithorhynchus_anatinus
ENSCVAG00000002687	raver2	86	55.729	ENSOCUG00000006221	RAVER2	56	55.729	Oryctolagus_cuniculus
ENSCVAG00000002687	raver2	99	80.816	ENSORLG00000010073	raver2	75	80.665	Oryzias_latipes
ENSCVAG00000002687	raver2	99	80.694	ENSORLG00020010822	raver2	75	80.392	Oryzias_latipes_hni
ENSCVAG00000002687	raver2	77	93.093	ENSORLG00015000191	raver2	86	93.093	Oryzias_latipes_hsok
ENSCVAG00000002687	raver2	99	80.543	ENSOMEG00000007789	raver2	75	80.543	Oryzias_melastigma
ENSCVAG00000002687	raver2	78	56.410	ENSOGAG00000011157	RAVER2	57	56.410	Otolemur_garnettii
ENSCVAG00000002687	raver2	85	58.421	ENSOARG00000010030	RAVER2	55	58.421	Ovis_aries
ENSCVAG00000002687	raver2	85	57.632	ENSPPAG00000039189	RAVER2	57	57.632	Pan_paniscus
ENSCVAG00000002687	raver2	85	58.684	ENSPPRG00000023350	RAVER2	55	58.684	Panthera_pardus
ENSCVAG00000002687	raver2	77	57.681	ENSPTIG00000009389	RAVER2	50	57.681	Panthera_tigris_altaica
ENSCVAG00000002687	raver2	84	58.152	ENSPTRG00000000824	RAVER2	57	58.152	Pan_troglodytes
ENSCVAG00000002687	raver2	86	56.736	ENSPANG00000003396	RAVER2	55	56.812	Papio_anubis
ENSCVAG00000002687	raver2	88	60.506	ENSPKIG00000013925	raver2	86	58.295	Paramormyrops_kingsleyae
ENSCVAG00000002687	raver2	68	54.754	ENSPSIG00000010074	RAVER2	57	48.077	Pelodiscus_sinensis
ENSCVAG00000002687	raver2	81	77.208	ENSPMGG00000017781	raver2	83	76.771	Periophthalmus_magnuspinnatus
ENSCVAG00000002687	raver2	89	56.566	ENSPEMG00000001332	Raver2	56	59.043	Peromyscus_maniculatus_bairdii
ENSCVAG00000002687	raver2	85	58.575	ENSPCIG00000020336	RAVER2	56	58.486	Phascolarctos_cinereus
ENSCVAG00000002687	raver2	99	93.505	ENSPFOG00000009386	raver2	82	93.505	Poecilia_formosa
ENSCVAG00000002687	raver2	99	93.353	ENSPLAG00000005632	raver2	75	93.353	Poecilia_latipinna
ENSCVAG00000002687	raver2	99	93.656	ENSPMEG00000000509	raver2	75	93.656	Poecilia_mexicana
ENSCVAG00000002687	raver2	99	93.353	ENSPREG00000020514	raver2	75	93.353	Poecilia_reticulata
ENSCVAG00000002687	raver2	72	64.103	ENSPPYG00000001271	-	75	64.103	Pongo_abelii
ENSCVAG00000002687	raver2	91	56.642	ENSPCOG00000028379	RAVER2	54	58.602	Propithecus_coquereli
ENSCVAG00000002687	raver2	77	56.522	ENSPVAG00000007172	RAVER2	57	56.522	Pteropus_vampyrus
ENSCVAG00000002687	raver2	54	93.590	ENSPNYG00000013943	-	78	93.913	Pundamilia_nyererei
ENSCVAG00000002687	raver2	99	57.833	ENSPNAG00000000962	raver2	98	58.150	Pygocentrus_nattereri
ENSCVAG00000002687	raver2	85	58.311	ENSRNOG00000023812	Raver2	56	58.311	Rattus_norvegicus
ENSCVAG00000002687	raver2	84	57.825	ENSRBIG00000044090	RAVER2	60	57.895	Rhinopithecus_bieti
ENSCVAG00000002687	raver2	80	57.542	ENSRROG00000041867	RAVER2	52	57.542	Rhinopithecus_roxellana
ENSCVAG00000002687	raver2	83	56.720	ENSSBOG00000023706	RAVER2	59	56.720	Saimiri_boliviensis_boliviensis
ENSCVAG00000002687	raver2	78	56.941	ENSSHAG00000014568	RAVER2	57	56.941	Sarcophilus_harrisii
ENSCVAG00000002687	raver2	88	74.219	ENSSFOG00015001335	raver2	87	73.724	Scleropages_formosus
ENSCVAG00000002687	raver2	99	82.687	ENSSMAG00000020654	raver2	83	82.153	Scophthalmus_maximus
ENSCVAG00000002687	raver2	99	83.535	ENSSDUG00000013065	raver2	75	83.861	Seriola_dumerili
ENSCVAG00000002687	raver2	99	83.535	ENSSLDG00000002746	raver2	78	83.861	Seriola_lalandi_dorsalis
ENSCVAG00000002687	raver2	87	57.179	ENSSPUG00000016441	RAVER2	58	57.179	Sphenodon_punctatus
ENSCVAG00000002687	raver2	94	87.981	ENSSPAG00000004134	raver2	96	87.981	Stegastes_partitus
ENSCVAG00000002687	raver2	65	55.516	ENSSSCG00000037672	-	64	55.516	Sus_scrofa
ENSCVAG00000002687	raver2	85	58.311	ENSSSCG00000025672	-	59	58.311	Sus_scrofa
ENSCVAG00000002687	raver2	78	55.143	ENSTGUG00000009973	RAVER2	63	55.143	Taeniopygia_guttata
ENSCVAG00000002687	raver2	91	88.832	ENSTRUG00000018541	raver2	67	88.718	Takifugu_rubripes
ENSCVAG00000002687	raver2	80	90.883	ENSTNIG00000018106	raver2	65	90.778	Tetraodon_nigroviridis
ENSCVAG00000002687	raver2	56	66.116	ENSTBEG00000009004	RAVER2	68	35.604	Tupaia_belangeri
ENSCVAG00000002687	raver2	79	57.507	ENSUAMG00000007847	RAVER2	53	57.507	Ursus_americanus
ENSCVAG00000002687	raver2	77	56.936	ENSUMAG00000008489	RAVER2	52	56.936	Ursus_maritimus
ENSCVAG00000002687	raver2	82	58.743	ENSVVUG00000013993	RAVER2	58	58.743	Vulpes_vulpes
ENSCVAG00000002687	raver2	74	54.573	ENSXETG00000020406	raver2	73	36.086	Xenopus_tropicalis
ENSCVAG00000002687	raver2	55	96.218	ENSXCOG00000008271	-	76	96.218	Xiphophorus_couchianus
ENSCVAG00000002687	raver2	99	93.505	ENSXMAG00000002206	raver2	75	93.505	Xiphophorus_maculatus