EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000002788 (Gene tree)
Gene ID: 107092810
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9539 bases
Position: chrKL652896.1:432144-441682
Accession: 107092810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	1	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	2	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	3	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	4	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	5	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	6	7
ENSCVAP00000001772	zf-C2H2	PF00096.26	1.3e-31	7	7
ENSCVAP00000001772	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012845	-	3667	XM_015387467	ENSCVAP00000001772	751 (aa)	XP_015242953	UPI000742825C

Gene Model

Click here to download ENSCVAG00000002788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000002788	e4f1	72	43.529	ENSCVAG00000005112	-	79	43.529
ENSCVAG00000002788	e4f1	57	40.237	ENSCVAG00000017511	-	91	40.237
ENSCVAG00000002788	e4f1	57	39.815	ENSCVAG00000012216	-	87	39.640
ENSCVAG00000002788	e4f1	55	42.647	ENSCVAG00000021225	-	93	50.000
ENSCVAG00000002788	e4f1	58	40.698	ENSCVAG00000006389	-	94	43.373
ENSCVAG00000002788	e4f1	54	46.154	ENSCVAG00000018507	-	72	46.154
ENSCVAG00000002788	e4f1	67	42.045	ENSCVAG00000022991	-	95	41.916
ENSCVAG00000002788	e4f1	57	44.828	ENSCVAG00000012302	-	83	44.828
ENSCVAG00000002788	e4f1	57	40.260	ENSCVAG00000007073	-	71	40.260
ENSCVAG00000002788	e4f1	64	40.741	ENSCVAG00000012543	-	95	46.988
ENSCVAG00000002788	e4f1	61	34.667	ENSCVAG00000003250	-	69	40.000
ENSCVAG00000002788	e4f1	56	45.098	ENSCVAG00000017005	sall3b	64	48.352
ENSCVAG00000002788	e4f1	61	37.179	ENSCVAG00000016098	-	95	37.349
ENSCVAG00000002788	e4f1	61	41.096	ENSCVAG00000016092	-	65	41.026
ENSCVAG00000002788	e4f1	78	40.123	ENSCVAG00000012228	-	79	43.373
ENSCVAG00000002788	e4f1	61	37.662	ENSCVAG00000009981	-	84	37.662
ENSCVAG00000002788	e4f1	57	39.759	ENSCVAG00000002242	-	91	43.038
ENSCVAG00000002788	e4f1	69	41.667	ENSCVAG00000016862	-	89	43.396
ENSCVAG00000002788	e4f1	58	40.854	ENSCVAG00000014734	-	90	45.455
ENSCVAG00000002788	e4f1	62	38.125	ENSCVAG00000002500	-	89	40.541
ENSCVAG00000002788	e4f1	69	36.036	ENSCVAG00000002506	-	95	40.816
ENSCVAG00000002788	e4f1	58	42.500	ENSCVAG00000010160	-	77	45.614
ENSCVAG00000002788	e4f1	56	40.000	ENSCVAG00000017890	-	87	40.000
ENSCVAG00000002788	e4f1	72	42.029	ENSCVAG00000002252	-	97	42.029
ENSCVAG00000002788	e4f1	70	40.625	ENSCVAG00000003514	-	76	47.500
ENSCVAG00000002788	e4f1	81	39.474	ENSCVAG00000012284	-	77	45.570
ENSCVAG00000002788	e4f1	62	43.750	ENSCVAG00000004958	-	87	43.750
ENSCVAG00000002788	e4f1	59	37.410	ENSCVAG00000006491	-	66	38.235
ENSCVAG00000002788	e4f1	87	37.725	ENSCVAG00000012180	-	97	40.789
ENSCVAG00000002788	e4f1	57	41.250	ENSCVAG00000014404	-	92	41.250
ENSCVAG00000002788	e4f1	67	39.759	ENSCVAG00000010442	-	97	42.169
ENSCVAG00000002788	e4f1	58	43.038	ENSCVAG00000014269	-	97	43.548
ENSCVAG00000002788	e4f1	61	39.535	ENSCVAG00000002488	-	74	39.535
ENSCVAG00000002788	e4f1	60	39.326	ENSCVAG00000012248	-	91	40.506
ENSCVAG00000002788	e4f1	72	36.686	ENSCVAG00000003601	ZNF319	78	36.686
ENSCVAG00000002788	e4f1	57	37.500	ENSCVAG00000019537	-	79	38.667
ENSCVAG00000002788	e4f1	74	38.095	ENSCVAG00000011235	-	85	39.286
ENSCVAG00000002788	e4f1	56	44.444	ENSCVAG00000003433	-	96	46.753
ENSCVAG00000002788	e4f1	61	39.759	ENSCVAG00000007051	-	99	39.759
ENSCVAG00000002788	e4f1	58	40.845	ENSCVAG00000002295	-	78	41.250
ENSCVAG00000002788	e4f1	71	48.333	ENSCVAG00000001444	-	95	50.000
ENSCVAG00000002788	e4f1	57	38.462	ENSCVAG00000003497	-	93	42.254
ENSCVAG00000002788	e4f1	50	38.272	ENSCVAG00000013692	prdm5	64	38.272
ENSCVAG00000002788	e4f1	56	44.643	ENSCVAG00000001767	-	74	44.643
ENSCVAG00000002788	e4f1	58	39.759	ENSCVAG00000000419	-	64	39.759
ENSCVAG00000002788	e4f1	54	40.260	ENSCVAG00000019646	-	67	40.260
ENSCVAG00000002788	e4f1	59	41.615	ENSCVAG00000016181	-	92	41.615
ENSCVAG00000002788	e4f1	70	37.778	ENSCVAG00000009258	znf319b	83	37.778
ENSCVAG00000002788	e4f1	52	44.000	ENSCVAG00000002833	-	67	44.000
ENSCVAG00000002788	e4f1	65	43.210	ENSCVAG00000001369	-	83	46.250
ENSCVAG00000002788	e4f1	59	40.789	ENSCVAG00000014322	-	70	40.789
ENSCVAG00000002788	e4f1	54	46.835	ENSCVAG00000015153	-	79	46.835
ENSCVAG00000002788	e4f1	56	41.935	ENSCVAG00000016796	-	81	41.935
ENSCVAG00000002788	e4f1	58	42.515	ENSCVAG00000008200	-	84	42.515
ENSCVAG00000002788	e4f1	56	40.719	ENSCVAG00000008206	-	83	40.719
ENSCVAG00000002788	e4f1	72	43.636	ENSCVAG00000013337	-	91	43.636
ENSCVAG00000002788	e4f1	53	40.506	ENSCVAG00000019764	-	62	40.506
ENSCVAG00000002788	e4f1	65	40.000	ENSCVAG00000021107	-	99	44.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002788	e4f1	100	68.568	ENSCSEG00000015852	e4f1	98	60.437	Cynoglossus_semilaevis
ENSCVAG00000002788	e4f1	99	83.613	ENSFHEG00000022551	e4f1	97	83.526	Fundulus_heteroclitus
ENSCVAG00000002788	e4f1	95	63.339	ENSGMOG00000011409	e4f1	95	62.579	Gadus_morhua
ENSCVAG00000002788	e4f1	100	73.587	ENSGACG00000011808	e4f1	100	72.930	Gasterosteus_aculeatus
ENSCVAG00000002788	e4f1	100	66.710	ENSHCOG00000016455	e4f1	100	66.839	Hippocampus_comes
ENSCVAG00000002788	e4f1	100	52.756	ENSIPUG00000005379	e4f1	99	54.068	Ictalurus_punctatus
ENSCVAG00000002788	e4f1	100	73.745	ENSLBEG00000026373	e4f1	100	74.131	Labrus_bergylta
ENSCVAG00000002788	e4f1	100	68.865	ENSMMOG00000007612	e4f1	100	69.261	Mola_mola
ENSCVAG00000002788	e4f1	100	74.443	ENSMALG00000007314	e4f1	100	74.967	Monopterus_albus
ENSCVAG00000002788	e4f1	100	73.958	ENSORLG00000009160	e4f1	100	73.177	Oryzias_latipes
ENSCVAG00000002788	e4f1	100	71.537	ENSORLG00020017974	e4f1	100	70.781	Oryzias_latipes_hni
ENSCVAG00000002788	e4f1	100	74.413	ENSORLG00015007385	e4f1	100	73.890	Oryzias_latipes_hsok
ENSCVAG00000002788	e4f1	100	74.118	ENSOMEG00000012220	e4f1	100	74.118	Oryzias_melastigma
ENSCVAG00000002788	e4f1	100	55.995	ENSPKIG00000001942	e4f1	99	55.882	Paramormyrops_kingsleyae
ENSCVAG00000002788	e4f1	94	70.968	ENSPMGG00000020527	e4f1	99	82.727	Periophthalmus_magnuspinnatus
ENSCVAG00000002788	e4f1	99	53.623	ENSSFOG00015021291	e4f1	99	53.228	Scleropages_formosus
ENSCVAG00000002788	e4f1	100	75.452	ENSSMAG00000014720	e4f1	100	75.452	Scophthalmus_maximus
ENSCVAG00000002788	e4f1	98	47.607	ENSSPUG00000011420	E4F1	95	46.727	Sphenodon_punctatus
ENSCVAG00000002788	e4f1	100	68.892	ENSTRUG00000005176	e4f1	100	69.521	Takifugu_rubripes
ENSCVAG00000002788	e4f1	96	68.758	ENSTNIG00000018001	e4f1	100	67.957	Tetraodon_nigroviridis
ENSCVAG00000002788	e4f1	83	66.400	ENSXETG00000016091	e4f1	99	69.643	Xenopus_tropicalis