EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000002869 (Gene tree)
Gene ID: 107087838
Gene Symbol: mrpl53
Alias: zgc:103761
Full Name: mitochondrial ribosomal protein L53
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2897 bases
Position: chrKL652696.1:494747-497643
Accession: 107087838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021080	MRP_L53	PF10780.9	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012722	-	511	XM_015379623	ENSCVAP00000021080	108 (aa)	XP_015235109	UPI0007424EDF

Gene Model

Click here to download ENSCVAG00000002869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000002869	mrpl53	100	80.556	ENSAPOG00000018686	mrpl53	100	80.556	Acanthochromis_polyacanthus
ENSCVAG00000002869	mrpl53	100	81.481	ENSACIG00000015651	mrpl53	100	81.481	Amphilophus_citrinellus
ENSCVAG00000002869	mrpl53	100	79.630	ENSAOCG00000015743	mrpl53	100	79.630	Amphiprion_ocellaris
ENSCVAG00000002869	mrpl53	100	79.630	ENSAPEG00000011361	mrpl53	100	79.630	Amphiprion_percula
ENSCVAG00000002869	mrpl53	100	72.222	ENSATEG00000013631	mrpl53	100	72.222	Anabas_testudineus
ENSCVAG00000002869	mrpl53	100	80.556	ENSACLG00000015516	mrpl53	100	80.556	Astatotilapia_calliptera
ENSCVAG00000002869	mrpl53	98	70.755	ENSAMXG00000036162	mrpl53	99	70.755	Astyanax_mexicanus
ENSCVAG00000002869	mrpl53	92	54.545	ENSCPBG00000007276	-	89	54.545	Chrysemys_picta_bellii
ENSCVAG00000002869	mrpl53	100	74.074	ENSCSEG00000017619	mrpl53	92	74.074	Cynoglossus_semilaevis
ENSCVAG00000002869	mrpl53	100	64.815	ENSDARG00000008920	mrpl53	100	64.815	Danio_rerio
ENSCVAG00000002869	mrpl53	94	39.416	ENSEBUG00000009798	mrpl53	97	39.416	Eptatretus_burgeri
ENSCVAG00000002869	mrpl53	99	71.963	ENSELUG00000003794	mrpl53	99	71.963	Esox_lucius
ENSCVAG00000002869	mrpl53	88	58.947	ENSFALG00000008629	-	87	58.947	Ficedula_albicollis
ENSCVAG00000002869	mrpl53	100	87.037	ENSFHEG00000012925	mrpl53	100	87.037	Fundulus_heteroclitus
ENSCVAG00000002869	mrpl53	96	74.038	ENSGMOG00000003046	mrpl53	98	74.038	Gadus_morhua
ENSCVAG00000002869	mrpl53	88	54.737	ENSGALG00000037867	MRPL53	88	54.737	Gallus_gallus
ENSCVAG00000002869	mrpl53	100	86.111	ENSGAFG00000010591	mrpl53	100	86.111	Gambusia_affinis
ENSCVAG00000002869	mrpl53	100	70.370	ENSGACG00000003453	mrpl53	100	70.370	Gasterosteus_aculeatus
ENSCVAG00000002869	mrpl53	92	52.525	ENSGAGG00000013774	-	89	52.525	Gopherus_agassizii
ENSCVAG00000002869	mrpl53	100	80.556	ENSHBUG00000002532	mrpl53	100	80.556	Haplochromis_burtoni
ENSCVAG00000002869	mrpl53	99	72.897	ENSHCOG00000019265	mrpl53	100	72.897	Hippocampus_comes
ENSCVAG00000002869	mrpl53	98	69.811	ENSIPUG00000001363	MRPL53	99	69.811	Ictalurus_punctatus
ENSCVAG00000002869	mrpl53	100	78.704	ENSKMAG00000007151	mrpl53	73	78.704	Kryptolebias_marmoratus
ENSCVAG00000002869	mrpl53	100	72.222	ENSLBEG00000018225	mrpl53	100	72.222	Labrus_bergylta
ENSCVAG00000002869	mrpl53	98	68.868	ENSLACG00000008769	mrpl53	97	68.868	Latimeria_chalumnae
ENSCVAG00000002869	mrpl53	99	67.290	ENSLOCG00000002871	mrpl53	98	67.290	Lepisosteus_oculatus
ENSCVAG00000002869	mrpl53	99	76.636	ENSMAMG00000013973	mrpl53	100	76.636	Mastacembelus_armatus
ENSCVAG00000002869	mrpl53	100	80.556	ENSMZEG00005003657	mrpl53	100	80.556	Maylandia_zebra
ENSCVAG00000002869	mrpl53	100	80.556	ENSMZEG00005028437	mrpl53	100	80.556	Maylandia_zebra
ENSCVAG00000002869	mrpl53	100	73.394	ENSMMOG00000018994	mrpl53	100	73.394	Mola_mola
ENSCVAG00000002869	mrpl53	100	58.333	ENSMALG00000005152	mrpl53	100	58.333	Monopterus_albus
ENSCVAG00000002869	mrpl53	100	80.556	ENSNBRG00000013184	mrpl53	100	80.556	Neolamprologus_brichardi
ENSCVAG00000002869	mrpl53	97	80.952	ENSONIG00000002633	mrpl53	99	80.952	Oreochromis_niloticus
ENSCVAG00000002869	mrpl53	100	74.074	ENSORLG00000028306	mrpl53	100	74.074	Oryzias_latipes
ENSCVAG00000002869	mrpl53	100	72.222	ENSORLG00020006678	mrpl53	100	72.222	Oryzias_latipes_hni
ENSCVAG00000002869	mrpl53	100	74.074	ENSORLG00015014629	mrpl53	100	74.074	Oryzias_latipes_hsok
ENSCVAG00000002869	mrpl53	100	77.778	ENSOMEG00000012839	mrpl53	100	77.778	Oryzias_melastigma
ENSCVAG00000002869	mrpl53	96	64.423	ENSPKIG00000006982	mrpl53	98	64.423	Paramormyrops_kingsleyae
ENSCVAG00000002869	mrpl53	59	54.688	ENSPSIG00000013947	-	66	54.688	Pelodiscus_sinensis
ENSCVAG00000002869	mrpl53	94	72.277	ENSPMGG00000022855	mrpl53	93	72.277	Periophthalmus_magnuspinnatus
ENSCVAG00000002869	mrpl53	94	88.235	ENSPLAG00000006658	mrpl53	98	88.235	Poecilia_latipinna
ENSCVAG00000002869	mrpl53	94	89.216	ENSPMEG00000016912	mrpl53	98	89.216	Poecilia_mexicana
ENSCVAG00000002869	mrpl53	94	89.216	ENSPMEG00000002671	mrpl53	98	89.216	Poecilia_mexicana
ENSCVAG00000002869	mrpl53	94	89.216	ENSPREG00000008114	mrpl53	98	89.216	Poecilia_reticulata
ENSCVAG00000002869	mrpl53	100	80.556	ENSPNYG00000011866	mrpl53	100	80.556	Pundamilia_nyererei
ENSCVAG00000002869	mrpl53	98	71.698	ENSPNAG00000010462	mrpl53	99	71.698	Pygocentrus_nattereri
ENSCVAG00000002869	mrpl53	93	64.000	ENSSFOG00015004568	mrpl53	94	64.000	Scleropages_formosus
ENSCVAG00000002869	mrpl53	100	72.222	ENSSMAG00000007790	mrpl53	100	72.222	Scophthalmus_maximus
ENSCVAG00000002869	mrpl53	100	76.852	ENSSDUG00000011350	mrpl53	100	76.852	Seriola_dumerili
ENSCVAG00000002869	mrpl53	100	75.000	ENSSLDG00000013473	mrpl53	100	75.000	Seriola_lalandi_dorsalis
ENSCVAG00000002869	mrpl53	89	53.125	ENSSPUG00000009029	-	85	53.125	Sphenodon_punctatus
ENSCVAG00000002869	mrpl53	100	75.000	ENSSPAG00000019879	mrpl53	92	75.000	Stegastes_partitus
ENSCVAG00000002869	mrpl53	88	57.895	ENSTGUG00000013874	-	86	57.895	Taeniopygia_guttata
ENSCVAG00000002869	mrpl53	88	57.895	ENSTGUG00000011655	-	86	57.895	Taeniopygia_guttata
ENSCVAG00000002869	mrpl53	92	76.768	ENSTRUG00000014652	mrpl53	93	76.768	Takifugu_rubripes
ENSCVAG00000002869	mrpl53	100	52.778	ENSXETG00000027254	mrpl53	100	52.778	Xenopus_tropicalis
ENSCVAG00000002869	mrpl53	94	85.294	ENSXCOG00000020063	mrpl53	96	85.294	Xiphophorus_couchianus
ENSCVAG00000002869	mrpl53	100	86.111	ENSXMAG00000024348	mrpl53	100	86.111	Xiphophorus_maculatus