EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000002961 (Gene tree)
Gene ID
107094584
Gene Symbol
u2surp
Alias
mp:zf637-1-000918|si:dkey-181m9.9|wu:fa03e02|wu:fb38b01|wu:fc75d03
Full Name
U2 snRNP associated SURP domain containing
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
16019 bases
Position
chrKL652991.1:62159-78177
Accession
107094584
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000021093cwf21PF08312.121.4e-1111
ENSCVAP00000001903cwf21PF08312.121.4e-1111
ENSCVAP00000001915cwf21PF08312.121.5e-1111
ENSCVAP00000021093RRM_1PF00076.222.5e-1511
ENSCVAP00000001903RRM_1PF00076.222.5e-1511
ENSCVAP00000001915RRM_1PF00076.222.6e-1511
ENSCVAP00000021093SurpPF01805.201.5e-1811
ENSCVAP00000001903SurpPF01805.201.6e-1811
ENSCVAP00000001915SurpPF01805.201.6e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000012611-4260XM_015390295ENSCVAP00000001915967 (aa)XP_015245781UPI000742565C
ENSCVAT00000012651-4274-ENSCVAP00000021093939 (aa)--
ENSCVAT00000012630-4224-ENSCVAP00000001903955 (aa)--
Gene Model
Click here to download ENSCVAG00000002961's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000002961's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000002961u2surp9651.310ENSCVAG00000012334zgc:1630988855.006
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000002961u2surp9975.525ENSG00000163714U2SURP8873.261Homo_sapiens
ENSCVAG00000002961u2surp9052.948ENSAPOG00000005569zgc:1630988856.045Acanthochromis_polyacanthus
ENSCVAG00000002961u2surp9488.541ENSAPOG00000011345u2surp9488.216Acanthochromis_polyacanthus
ENSCVAG00000002961u2surp9975.525ENSAMEG00000012757U2SURP8873.261Ailuropoda_melanoleuca
ENSCVAG00000002961u2surp9489.177ENSACIG00000018537u2surp9888.865Amphilophus_citrinellus
ENSCVAG00000002961u2surp9645.275ENSACIG00000011968zgc:1630988747.959Amphilophus_citrinellus
ENSCVAG00000002961u2surp9551.041ENSAOCG00000008482zgc:1630988855.793Amphiprion_ocellaris
ENSCVAG00000002961u2surp9489.313ENSAOCG00000003589u2surp9388.986Amphiprion_ocellaris
ENSCVAG00000002961u2surp9489.095ENSAPEG00000016652u2surp9487.670Amphiprion_percula
ENSCVAG00000002961u2surp9551.041ENSAPEG00000001348zgc:1630988855.793Amphiprion_percula
ENSCVAG00000002961u2surp8254.499ENSATEG00000016576zgc:1630988954.707Anabas_testudineus
ENSCVAG00000002961u2surp9489.027ENSATEG00000006321u2surp9488.914Anabas_testudineus
ENSCVAG00000002961u2surp9975.157ENSAPLG00000002348U2SURP9473.529Anas_platyrhynchos
ENSCVAG00000002961u2surp9974.397ENSACAG00000009512U2SURP8971.113Anolis_carolinensis
ENSCVAG00000002961u2surp9975.525ENSANAG00000035774U2SURP9373.523Aotus_nancymaae
ENSCVAG00000002961u2surp9487.922ENSACLG00000027507u2surp9488.222Astatotilapia_calliptera
ENSCVAG00000002961u2surp9650.441ENSACLG00000016647zgc:1630989150.699Astatotilapia_calliptera
ENSCVAG00000002961u2surp8751.807ENSAMXG00000005081zgc:1630989752.199Astyanax_mexicanus
ENSCVAG00000002961u2surp8580.238ENSAMXG00000006189u2surp8880.719Astyanax_mexicanus
ENSCVAG00000002961u2surp7931.985WBGene00015581C07H6.47434.110Caenorhabditis_elegans
ENSCVAG00000002961u2surp9975.630ENSCJAG00000001639U2SURP8873.014Callithrix_jacchus
ENSCVAG00000002961u2surp9975.630ENSCAFG00000007973U2SURP8873.014Canis_familiaris
ENSCVAG00000002961u2surp9975.525ENSCAFG00020010497U2SURP8777.259Canis_lupus_dingo
ENSCVAG00000002961u2surp9975.420ENSCHIG00000023892U2SURP8972.797Capra_hircus
ENSCVAG00000002961u2surp9975.525ENSTSYG00000008889U2SURP9173.102Carlito_syrichta
ENSCVAG00000002961u2surp8675.152ENSCAPG00000016009U2SURP9271.739Cavia_aperea
ENSCVAG00000002961u2surp8677.025ENSCPOG00000011656U2SURP9474.427Cavia_porcellus
ENSCVAG00000002961u2surp9970.319ENSCCAG00000032530U2SURP8477.259Cebus_capucinus
ENSCVAG00000002961u2surp9975.525ENSCATG00000039024U2SURP9473.002Cercocebus_atys
ENSCVAG00000002961u2surp9955.056ENSCLAG00000011055-8955.392Chinchilla_lanigera
ENSCVAG00000002961u2surp9975.525ENSCLAG00000001331-9472.363Chinchilla_lanigera
ENSCVAG00000002961u2surp9975.630ENSCSAG00000011321U2SURP8873.014Chlorocebus_sabaeus
ENSCVAG00000002961u2surp6281.989ENSCHOG00000001300U2SURP6980.155Choloepus_hoffmanni
ENSCVAG00000002961u2surp9974.974ENSCPBG00000008969U2SURP9473.040Chrysemys_picta_bellii
ENSCVAG00000002961u2surp8951.580ENSCING00000018030-9053.269Ciona_intestinalis
ENSCVAG00000002961u2surp9051.034ENSCSAVG00000009039-9951.965Ciona_savignyi
ENSCVAG00000002961u2surp9975.525ENSCANG00000032307U2SURP9472.894Colobus_angolensis_palliatus
ENSCVAG00000002961u2surp9975.630ENSCGRG00001019402U2surp9472.363Cricetulus_griseus_chok1gshd
ENSCVAG00000002961u2surp9079.522ENSCGRG00000014315U2surp9977.279Cricetulus_griseus_crigri
ENSCVAG00000002961u2surp9948.069ENSCSEG00000020119zgc:1630988852.107Cynoglossus_semilaevis
ENSCVAG00000002961u2surp9587.257ENSCSEG00000015150u2surp9987.090Cynoglossus_semilaevis
ENSCVAG00000002961u2surp9553.614ENSDARG00000078911zgc:1630989856.522Danio_rerio
ENSCVAG00000002961u2surp9679.409ENSDARG00000061490u2surp9988.129Danio_rerio
ENSCVAG00000002961u2surp9975.236ENSDNOG00000006427U2SURP8873.073Dasypus_novemcinctus
ENSCVAG00000002961u2surp8545.779FBgn0034572CG93468446.290Drosophila_melanogaster
ENSCVAG00000002961u2surp7674.227ENSETEG00000000149U2SURP7873.402Echinops_telfairi
ENSCVAG00000002961u2surp6455.940ENSEBUG00000003543u2surp7458.128Eptatretus_burgeri
ENSCVAG00000002961u2surp9975.525ENSEASG00005000213U2SURP8873.261Equus_asinus_asinus
ENSCVAG00000002961u2surp9975.630ENSECAG00000022460U2SURP8874.201Equus_caballus
ENSCVAG00000002961u2surp8872.191ENSEEUG00000013553U2SURP7071.060Erinaceus_europaeus
ENSCVAG00000002961u2surp8657.509ENSELUG00000017966zgc:1630988559.160Esox_lucius
ENSCVAG00000002961u2surp9979.406ENSELUG00000002150u2surp9478.125Esox_lucius
ENSCVAG00000002961u2surp9975.630ENSFCAG00000012186U2SURP8873.014Felis_catus
ENSCVAG00000002961u2surp9973.651ENSFALG00000007070U2SURP9471.058Ficedula_albicollis
ENSCVAG00000002961u2surp9975.525ENSFDAG00000013365U2SURP9472.363Fukomys_damarensis
ENSCVAG00000002961u2surp9492.475ENSFHEG00000016966u2surp9492.912Fundulus_heteroclitus
ENSCVAG00000002961u2surp9648.964ENSFHEG00000014263zgc:1630988853.074Fundulus_heteroclitus
ENSCVAG00000002961u2surp7555.601ENSGMOG00000000935zgc:1630989455.876Gadus_morhua
ENSCVAG00000002961u2surp9678.665ENSGMOG00000002641u2surp8682.395Gadus_morhua
ENSCVAG00000002961u2surp9974.528ENSGALG00000002612U2SURP8573.173Gallus_gallus
ENSCVAG00000002961u2surp9493.679ENSGAFG00000004001u2surp9990.461Gambusia_affinis
ENSCVAG00000002961u2surp9946.440ENSGACG00000020709zgc:1630988550.121Gasterosteus_aculeatus
ENSCVAG00000002961u2surp9782.567ENSGACG00000003763u2surp9481.540Gasterosteus_aculeatus
ENSCVAG00000002961u2surp9975.079ENSGAGG00000010747U2SURP9473.149Gopherus_agassizii
ENSCVAG00000002961u2surp9975.525ENSGGOG00000005563U2SURP9470.138Gorilla_gorilla
ENSCVAG00000002961u2surp8793.053ENSHBUG00000015530u2surp9392.211Haplochromis_burtoni
ENSCVAG00000002961u2surp9650.602ENSHBUG00000022716zgc:1630989553.207Haplochromis_burtoni
ENSCVAG00000002961u2surp9975.525ENSHGLG00000017227-9472.363Heterocephalus_glaber_female
ENSCVAG00000002961u2surp9276.000ENSHGLG00000018851-8555.252Heterocephalus_glaber_female
ENSCVAG00000002961u2surp9975.525ENSHGLG00100005796-9472.363Heterocephalus_glaber_male
ENSCVAG00000002961u2surp9756.367ENSHGLG00100001176-8554.705Heterocephalus_glaber_male
ENSCVAG00000002961u2surp9276.000ENSHGLG00100001134-8455.434Heterocephalus_glaber_male
ENSCVAG00000002961u2surp9684.199ENSHCOG00000011508u2surp8882.202Hippocampus_comes
ENSCVAG00000002961u2surp9677.921ENSIPUG00000007822u2surp9476.096Ictalurus_punctatus
ENSCVAG00000002961u2surp8953.147ENSIPUG00000019652zgc:1630989257.108Ictalurus_punctatus
ENSCVAG00000002961u2surp9975.630ENSSTOG00000015997U2SURP8872.797Ictidomys_tridecemlineatus
ENSCVAG00000002961u2surp9975.735ENSJJAG00000021595U2surp9472.257Jaculus_jaculus
ENSCVAG00000002961u2surp9949.470ENSKMAG00000009727zgc:1630988649.936Kryptolebias_marmoratus
ENSCVAG00000002961u2surp9791.516ENSKMAG00000012083u2surp9989.791Kryptolebias_marmoratus
ENSCVAG00000002961u2surp9584.452ENSLBEG00000026284u2surp9089.596Labrus_bergylta
ENSCVAG00000002961u2surp8550.248ENSLBEG00000002498zgc:1630988357.189Labrus_bergylta
ENSCVAG00000002961u2surp9973.333ENSLACG00000012318U2SURP9472.303Latimeria_chalumnae
ENSCVAG00000002961u2surp9360.908ENSLACG00000008434zgc:1630988464.005Latimeria_chalumnae
ENSCVAG00000002961u2surp9680.197ENSLOCG00000007828u2surp9478.341Lepisosteus_oculatus
ENSCVAG00000002961u2surp9649.791ENSLOCG00000013596zgc:1630988160.756Lepisosteus_oculatus
ENSCVAG00000002961u2surp9975.525ENSLAFG00000002566U2SURP8872.935Loxodonta_africana
ENSCVAG00000002961u2surp9975.525ENSMFAG00000031084U2SURP9473.002Macaca_fascicularis
ENSCVAG00000002961u2surp9975.525ENSMMUG00000002775U2SURP9273.501Macaca_mulatta
ENSCVAG00000002961u2surp9975.525ENSMNEG00000034553U2SURP9473.002Macaca_nemestrina
ENSCVAG00000002961u2surp9975.525ENSMLEG00000021031U2SURP9473.002Mandrillus_leucophaeus
ENSCVAG00000002961u2surp9651.375ENSMAMG00000016977zgc:1630988854.944Mastacembelus_armatus
ENSCVAG00000002961u2surp9485.839ENSMAMG00000003004u2surp9485.621Mastacembelus_armatus
ENSCVAG00000002961u2surp9650.441ENSMZEG00005016805zgc:1630989150.699Maylandia_zebra
ENSCVAG00000002961u2surp9487.895ENSMZEG00005021991u2surp9487.760Maylandia_zebra
ENSCVAG00000002961u2surp9975.262ENSMGAG00000006549U2SURP9473.529Meleagris_gallopavo
ENSCVAG00000002961u2surp9975.525ENSMICG00000049294U2SURP8873.261Microcebus_murinus
ENSCVAG00000002961u2surp9975.525ENSMOCG00000000631U2surp9472.363Microtus_ochrogaster
ENSCVAG00000002961u2surp9744.786ENSMMOG00000016677zgc:1630988647.421Mola_mola
ENSCVAG00000002961u2surp9485.205ENSMMOG00000004474u2surp9485.529Mola_mola
ENSCVAG00000002961u2surp9972.147ENSMODG00000021242-8671.351Monodelphis_domestica
ENSCVAG00000002961u2surp9970.457ENSMODG00000010847-9466.702Monodelphis_domestica
ENSCVAG00000002961u2surp8953.497ENSMALG00000015881zgc:1630989156.051Monopterus_albus
ENSCVAG00000002961u2surp9487.132ENSMALG00000007458u2surp9983.917Monopterus_albus
ENSCVAG00000002961u2surp9965.500MGP_CAROLIEiJ_G0032530-8076.968Mus_caroli
ENSCVAG00000002961u2surp9975.630ENSMUSG00000032407U2surp9472.363Mus_musculus
ENSCVAG00000002961u2surp9975.735MGP_PahariEiJ_G0015398U2surp9472.468Mus_pahari
ENSCVAG00000002961u2surp9975.630MGP_SPRETEiJ_G0033672U2surp9472.363Mus_spretus
ENSCVAG00000002961u2surp9975.525ENSMPUG00000011855U2SURP8873.261Mustela_putorius_furo
ENSCVAG00000002961u2surp9975.367ENSMLUG00000002920-8973.131Myotis_lucifugus
ENSCVAG00000002961u2surp10072.396ENSMLUG00000014633-7973.512Myotis_lucifugus
ENSCVAG00000002961u2surp9975.420ENSNGAG00000013707U2surp9472.257Nannospalax_galili
ENSCVAG00000002961u2surp9578.641ENSNBRG00000017162u2surp9789.916Neolamprologus_brichardi
ENSCVAG00000002961u2surp9975.525ENSNLEG00000004915U2SURP9373.002Nomascus_leucogenys
ENSCVAG00000002961u2surp8076.316ENSMEUG00000000127U2SURP6976.316Notamacropus_eugenii
ENSCVAG00000002961u2surp8871.756ENSOPRG00000011328U2SURP8563.723Ochotona_princeps
ENSCVAG00000002961u2surp9975.420ENSODEG00000008767U2SURP9472.257Octodon_degus
ENSCVAG00000002961u2surp9650.980ENSONIG00000005263zgc:1630988554.074Oreochromis_niloticus
ENSCVAG00000002961u2surp9489.402ENSONIG00000005909u2surp9488.781Oreochromis_niloticus
ENSCVAG00000002961u2surp9969.506ENSOANG00000003644U2SURP7975.481Ornithorhynchus_anatinus
ENSCVAG00000002961u2surp9975.525ENSOCUG00000012121U2SURP8873.261Oryctolagus_cuniculus
ENSCVAG00000002961u2surp9790.725ENSORLG00000010235u2surp9390.560Oryzias_latipes
ENSCVAG00000002961u2surp9052.921ENSORLG00000007141zgc:1630989453.403Oryzias_latipes
ENSCVAG00000002961u2surp8590.134ENSORLG00020011726u2surp9690.196Oryzias_latipes_hni
ENSCVAG00000002961u2surp9052.969ENSORLG00020005525zgc:1630988954.987Oryzias_latipes_hni
ENSCVAG00000002961u2surp9790.725ENSORLG00015011465u2surp9390.560Oryzias_latipes_hsok
ENSCVAG00000002961u2surp9052.564ENSORLG00015010776zgc:1630989453.233Oryzias_latipes_hsok
ENSCVAG00000002961u2surp9486.343ENSOMEG00000004962u2surp9886.275Oryzias_melastigma
ENSCVAG00000002961u2surp9975.525ENSOGAG00000004335U2SURP8873.261Otolemur_garnettii
ENSCVAG00000002961u2surp9974.399ENSOARG00000005871U2SURP8872.993Ovis_aries
ENSCVAG00000002961u2surp9975.525ENSPPRG00000022258U2SURP8873.261Panthera_pardus
ENSCVAG00000002961u2surp9975.210ENSPTIG00000001167U2SURP8872.935Panthera_tigris_altaica
ENSCVAG00000002961u2surp9975.605ENSPTRG00000015489U2SURP8873.261Pan_troglodytes
ENSCVAG00000002961u2surp9975.525ENSPANG00000000710U2SURP9473.002Papio_anubis
ENSCVAG00000002961u2surp9256.158ENSPKIG00000017920zgc:1630988660.101Paramormyrops_kingsleyae
ENSCVAG00000002961u2surp9678.172ENSPKIG00000021859u2surp8481.495Paramormyrops_kingsleyae
ENSCVAG00000002961u2surp9973.927ENSPSIG00000016578U2SURP9472.907Pelodiscus_sinensis
ENSCVAG00000002961u2surp8349.105ENSPMGG00000008623zgc:1630989868.323Periophthalmus_magnuspinnatus
ENSCVAG00000002961u2surp9975.525ENSPEMG00000020825U2surp9472.363Peromyscus_maniculatus_bairdii
ENSCVAG00000002961u2surp9972.795ENSPCIG00000004246U2SURP9470.022Phascolarctos_cinereus
ENSCVAG00000002961u2surp10095.988ENSPFOG00000014489u2surp10095.988Poecilia_formosa
ENSCVAG00000002961u2surp9649.242ENSPFOG00000011956zgc:1630988453.051Poecilia_formosa
ENSCVAG00000002961u2surp10095.988ENSPLAG00000006816u2surp10095.988Poecilia_latipinna
ENSCVAG00000002961u2surp9492.463ENSPMEG00000014599u2surp9987.991Poecilia_mexicana
ENSCVAG00000002961u2surp9488.415ENSPREG00000009325u2surp9395.528Poecilia_reticulata
ENSCVAG00000002961u2surp9975.394ENSPPYG00000014178U2SURP8872.797Pongo_abelii
ENSCVAG00000002961u2surp9969.053ENSPCAG00000015251U2SURP8072.694Procavia_capensis
ENSCVAG00000002961u2surp9972.464ENSPCOG00000019599U2SURP9169.894Propithecus_coquereli
ENSCVAG00000002961u2surp9971.324ENSPVAG00000016077U2SURP8868.913Pteropus_vampyrus
ENSCVAG00000002961u2surp9575.870ENSPNYG00000006246u2surp8289.736Pundamilia_nyererei
ENSCVAG00000002961u2surp8580.262ENSPNAG00000001722u2surp9680.622Pygocentrus_nattereri
ENSCVAG00000002961u2surp9652.065ENSPNAG00000023885zgc:1630989155.609Pygocentrus_nattereri
ENSCVAG00000002961u2surp9975.525ENSRNOG00000008607U2surp9472.363Rattus_norvegicus
ENSCVAG00000002961u2surp9974.635ENSRBIG00000041099U2SURP8871.848Rhinopithecus_bieti
ENSCVAG00000002961u2surp9975.525ENSRROG00000043548U2SURP9472.894Rhinopithecus_roxellana
ENSCVAG00000002961u2surp9975.525ENSSBOG00000027984U2SURP8873.261Saimiri_boliviensis_boliviensis
ENSCVAG00000002961u2surp9974.448ENSSHAG00000014407U2SURP8872.451Sarcophilus_harrisii
ENSCVAG00000002961u2surp8960.522ENSSFOG00015004962zgc:1630988462.957Scleropages_formosus
ENSCVAG00000002961u2surp9180.926ENSSFOG00015010470u2surp9276.400Scleropages_formosus
ENSCVAG00000002961u2surp9651.322ENSSMAG00000013442zgc:1630988655.499Scophthalmus_maximus
ENSCVAG00000002961u2surp9789.626ENSSMAG00000012475u2surp9489.712Scophthalmus_maximus
ENSCVAG00000002961u2surp9652.117ENSSDUG00000009881zgc:1630988855.805Seriola_dumerili
ENSCVAG00000002961u2surp9488.113ENSSDUG00000006136u2surp9488.004Seriola_dumerili
ENSCVAG00000002961u2surp9489.640ENSSLDG00000022385u2surp9489.967Seriola_lalandi_dorsalis
ENSCVAG00000002961u2surp9652.009ENSSLDG00000020364zgc:1630989558.127Seriola_lalandi_dorsalis
ENSCVAG00000002961u2surp8876.556ENSSARG00000013779U2SURP7974.363Sorex_araneus
ENSCVAG00000002961u2surp9974.497ENSSPUG00000013871U2SURP9473.392Sphenodon_punctatus
ENSCVAG00000002961u2surp9052.375ENSSPAG00000000916zgc:1630988855.280Stegastes_partitus
ENSCVAG00000002961u2surp9589.666ENSSPAG00000020432u2surp9890.294Stegastes_partitus
ENSCVAG00000002961u2surp9975.525ENSSSCG00000011684U2SURP8973.370Sus_scrofa
ENSCVAG00000002961u2surp9975.262ENSTGUG00000008687U2SURP9473.203Taeniopygia_guttata
ENSCVAG00000002961u2surp9584.154ENSTRUG00000017810u2surp9883.822Takifugu_rubripes
ENSCVAG00000002961u2surp9484.434ENSTNIG00000012767u2surp9484.751Tetraodon_nigroviridis
ENSCVAG00000002961u2surp9967.928ENSTBEG00000016313U2SURP7571.843Tupaia_belangeri
ENSCVAG00000002961u2surp9975.210ENSTTRG00000017170U2SURP8872.935Tursiops_truncatus
ENSCVAG00000002961u2surp9975.525ENSUAMG00000028259U2SURP9370.883Ursus_americanus
ENSCVAG00000002961u2surp9973.607ENSVPAG00000004697U2SURP8473.973Vicugna_pacos
ENSCVAG00000002961u2surp9975.525ENSVVUG00000021495U2SURP8873.261Vulpes_vulpes
ENSCVAG00000002961u2surp9974.947ENSXETG00000022133u2surp9472.834Xenopus_tropicalis
ENSCVAG00000002961u2surp6851.459ENSXCOG00000007025zgc:1630988855.000Xiphophorus_couchianus
ENSCVAG00000002961u2surp8594.800ENSXCOG00000011427u2surp9295.134Xiphophorus_couchianus
ENSCVAG00000002961u2surp9491.451ENSXMAG00000002608u2surp9491.916Xiphophorus_maculatus

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