EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000003018 (Gene tree)
Gene ID
107082787
Gene Symbol
-
Alias
-
Full Name
transcription activator BRG1-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
25851 bases
Position
chrKL652561.1:1798511-1824361
Accession
107082787
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000001933ResIIIPF04851.151.6e-0811
ENSCVAP00000001933BRKPF07533.165.6e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000012568-4719XM_015371643ENSCVAP000000019331572 (aa)XP_015227129-
Gene Model
Click here to download ENSCVAG00000003018's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003018's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000003018-9883.478ENSCVAG00000006979smarca4a9983.416
ENSCVAG00000003018-6779.943ENSCVAG00000016571SMARCA29370.227
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000003018-9884.596ENSG00000127616SMARCA49995.652Homo_sapiens
ENSCVAG00000003018-7685.176ENSAPOG00000003509smarca4a9883.799Acanthochromis_polyacanthus
ENSCVAG00000003018-9692.200ENSAPOG00000004542SMARCA49993.781Acanthochromis_polyacanthus
ENSCVAG00000003018-9881.265ENSAMEG00000010868SMARCA49980.361Ailuropoda_melanoleuca
ENSCVAG00000003018-9690.945ENSACIG00000003035-9693.209Amphilophus_citrinellus
ENSCVAG00000003018-9884.520ENSACIG00000021550smarca4a9883.354Amphilophus_citrinellus
ENSCVAG00000003018-9696.547ENSAOCG00000009450-9896.547Amphiprion_ocellaris
ENSCVAG00000003018-9185.873ENSAOCG00000019167smarca4a10085.546Amphiprion_ocellaris
ENSCVAG00000003018-9989.874ENSAPEG00000023108-9988.534Amphiprion_percula
ENSCVAG00000003018-9185.942ENSAPEG00000015559smarca4a10085.615Amphiprion_percula
ENSCVAG00000003018-9883.817ENSATEG00000011524smarca4a9983.921Anabas_testudineus
ENSCVAG00000003018-9690.552ENSATEG00000001094-9988.552Anabas_testudineus
ENSCVAG00000003018-9884.365ENSANAG00000036991SMARCA49981.110Aotus_nancymaae
ENSCVAG00000003018-9885.705ENSACLG00000000163smarca4a9885.903Astatotilapia_calliptera
ENSCVAG00000003018-9690.649ENSACLG00000008638-9790.649Astatotilapia_calliptera
ENSCVAG00000003018-9779.835ENSAMXG00000021023smarca4a9981.674Astyanax_mexicanus
ENSCVAG00000003018-9689.012ENSAMXG00000011238-9888.940Astyanax_mexicanus
ENSCVAG00000003018-9687.599ENSBTAG00000019220SMARCA49984.336Bos_taurus
ENSCVAG00000003018-9881.288ENSCJAG00000005936SMARCA49980.566Callithrix_jacchus
ENSCVAG00000003018-9884.721ENSCAFG00000017584SMARCA49984.408Canis_familiaris
ENSCVAG00000003018-9884.721ENSCAFG00020024620SMARCA49884.408Canis_lupus_dingo
ENSCVAG00000003018-9880.914ENSCHIG00000015318SMARCA49980.726Capra_hircus
ENSCVAG00000003018-9884.649ENSTSYG00000012966SMARCA49984.524Carlito_syrichta
ENSCVAG00000003018-9681.283ENSCAPG00000015932SMARCA48889.574Cavia_aperea
ENSCVAG00000003018-9884.847ENSCPOG00000015549SMARCA49984.471Cavia_porcellus
ENSCVAG00000003018-9881.931ENSCCAG00000031660SMARCA49881.682Cebus_capucinus
ENSCVAG00000003018-9884.596ENSCATG00000029530SMARCA49984.283Cercocebus_atys
ENSCVAG00000003018-9884.649ENSCLAG00000011946SMARCA49984.649Chinchilla_lanigera
ENSCVAG00000003018-9884.428ENSCPBG00000009994SMARCA49984.168Chrysemys_picta_bellii
ENSCVAG00000003018-9884.534ENSCANG00000036013SMARCA49984.283Colobus_angolensis_palliatus
ENSCVAG00000003018-9884.596ENSCGRG00001016732Smarca49984.158Cricetulus_griseus_chok1gshd
ENSCVAG00000003018-9884.773ENSCGRG00000017242Smarca49984.517Cricetulus_griseus_crigri
ENSCVAG00000003018-9482.841ENSCSEG00000014771smarca4a9982.684Cynoglossus_semilaevis
ENSCVAG00000003018-9785.178ENSDARG00000077226smarca4a9983.560Danio_rerio
ENSCVAG00000003018-9285.676ENSDARG00000104339SMARCA49385.290Danio_rerio
ENSCVAG00000003018-8181.277ENSDNOG00000048847SMARCA48890.608Dasypus_novemcinctus
ENSCVAG00000003018-8782.016ENSDORG00000002544Smarca49182.474Dipodomys_ordii
ENSCVAG00000003018-9676.114ENSETEG00000013361SMARCA49475.145Echinops_telfairi
ENSCVAG00000003018-9884.596ENSEASG00005006167SMARCA49982.292Equus_asinus_asinus
ENSCVAG00000003018-9884.659ENSECAG00000008334SMARCA49984.220Equus_caballus
ENSCVAG00000003018-9882.729ENSELUG00000010247smarca4a9980.677Esox_lucius
ENSCVAG00000003018-9880.038ENSELUG00000023232-9479.492Esox_lucius
ENSCVAG00000003018-9884.688ENSFCAG00000004894SMARCA49984.312Felis_catus
ENSCVAG00000003018-7491.482ENSFALG00000004208SMARCA49483.974Ficedula_albicollis
ENSCVAG00000003018-9387.390ENSFDAG00000012237SMARCA49787.121Fukomys_damarensis
ENSCVAG00000003018-9993.354ENSFHEG00000007902-9993.354Fundulus_heteroclitus
ENSCVAG00000003018-9482.992ENSFHEG00000010182smarca4a9982.603Fundulus_heteroclitus
ENSCVAG00000003018-9175.871ENSGMOG00000002649smarca4a8983.552Gadus_morhua
ENSCVAG00000003018-9184.514ENSGMOG00000005756-8685.185Gadus_morhua
ENSCVAG00000003018-7486.887ENSGALG00000047145SMARCA410085.871Gallus_gallus
ENSCVAG00000003018-9889.949ENSGAFG00000008827-9889.008Gambusia_affinis
ENSCVAG00000003018-8885.734ENSGAFG00000014900smarca4a9685.924Gambusia_affinis
ENSCVAG00000003018-9886.302ENSGACG00000016033-9985.504Gasterosteus_aculeatus
ENSCVAG00000003018-9482.949ENSGACG00000006691smarca4a9982.066Gasterosteus_aculeatus
ENSCVAG00000003018-9884.524ENSGAGG00000016757SMARCA49984.263Gopherus_agassizii
ENSCVAG00000003018-9884.596ENSGGOG00000009882SMARCA49984.283Gorilla_gorilla
ENSCVAG00000003018-9888.963ENSHBUG00000005447-9692.109Haplochromis_burtoni
ENSCVAG00000003018-9885.768ENSHBUG00000021172smarca4a9984.220Haplochromis_burtoni
ENSCVAG00000003018-9884.414ENSHGLG00000010519SMARCA49984.165Heterocephalus_glaber_female
ENSCVAG00000003018-9884.188ENSHGLG00100013774SMARCA49983.698Heterocephalus_glaber_male
ENSCVAG00000003018-9686.485ENSHCOG00000009510smarca4a9586.281Hippocampus_comes
ENSCVAG00000003018-9585.131ENSIPUG00000016346-9585.106Ictalurus_punctatus
ENSCVAG00000003018-9883.621ENSIPUG00000006107smarca4a9983.179Ictalurus_punctatus
ENSCVAG00000003018-9884.721ENSSTOG00000007939SMARCA49984.346Ictidomys_tridecemlineatus
ENSCVAG00000003018-9882.699ENSJJAG00000012877Smarca49982.025Jaculus_jaculus
ENSCVAG00000003018-9884.552ENSKMAG00000011931smarca4a9884.984Kryptolebias_marmoratus
ENSCVAG00000003018-9697.141ENSKMAG00000019518-9697.141Kryptolebias_marmoratus
ENSCVAG00000003018-7790.615ENSLBEG00000020655-9889.968Labrus_bergylta
ENSCVAG00000003018-9684.868ENSLBEG00000017383smarca4a9683.738Labrus_bergylta
ENSCVAG00000003018-5281.557ENSLACG00000015309SMARCA410080.838Latimeria_chalumnae
ENSCVAG00000003018-9882.467ENSLOCG00000007820smarca4a9980.595Lepisosteus_oculatus
ENSCVAG00000003018-9884.625ENSLAFG00000001433SMARCA49984.250Loxodonta_africana
ENSCVAG00000003018-9884.596ENSMFAG00000032146SMARCA49884.283Macaca_fascicularis
ENSCVAG00000003018-9884.596ENSMMUG00000012042SMARCA49984.283Macaca_mulatta
ENSCVAG00000003018-9884.398ENSMNEG00000028512SMARCA49984.085Macaca_nemestrina
ENSCVAG00000003018-9884.197ENSMLEG00000034976SMARCA49984.062Mandrillus_leucophaeus
ENSCVAG00000003018-9884.921ENSMAMG00000009256smarca4a9984.158Mastacembelus_armatus
ENSCVAG00000003018-9695.542ENSMAMG00000002841-9795.875Mastacembelus_armatus
ENSCVAG00000003018-9694.733ENSMZEG00005023861-9594.865Maylandia_zebra
ENSCVAG00000003018-9885.768ENSMZEG00005003889smarca4a9885.966Maylandia_zebra
ENSCVAG00000003018-9884.562ENSMAUG00000020731Smarca49984.062Mesocricetus_auratus
ENSCVAG00000003018-9884.688ENSMICG00000009806SMARCA49984.312Microcebus_murinus
ENSCVAG00000003018-9884.188ENSMOCG00000022209Smarca49983.875Microtus_ochrogaster
ENSCVAG00000003018-9887.587ENSMMOG00000008466-9885.777Mola_mola
ENSCVAG00000003018-9685.221ENSMMOG00000007571smarca4a9785.166Mola_mola
ENSCVAG00000003018-9883.303ENSMODG00000006287SMARCA49982.299Monodelphis_domestica
ENSCVAG00000003018-9484.997ENSMALG00000003388smarca4a9885.229Monopterus_albus
ENSCVAG00000003018-9190.808ENSMALG00000021534-9991.301Monopterus_albus
ENSCVAG00000003018-9884.471MGP_CAROLIEiJ_G0031879Smarca410086.220Mus_caroli
ENSCVAG00000003018-9884.471ENSMUSG00000032187Smarca49986.220Mus_musculus
ENSCVAG00000003018-9884.398MGP_PahariEiJ_G0014745Smarca410086.052Mus_pahari
ENSCVAG00000003018-9884.471MGP_SPRETEiJ_G0033003Smarca410086.220Mus_spretus
ENSCVAG00000003018-9884.721ENSMPUG00000005711SMARCA49984.346Mustela_putorius_furo
ENSCVAG00000003018-9884.784ENSMLUG00000004491-9984.471Myotis_lucifugus
ENSCVAG00000003018-9884.398ENSNGAG00000021852Smarca49984.085Nannospalax_galili
ENSCVAG00000003018-9190.605ENSNBRG00000018865-9991.928Neolamprologus_brichardi
ENSCVAG00000003018-9686.478ENSNBRG00000011457smarca4a9586.157Neolamprologus_brichardi
ENSCVAG00000003018-9683.509ENSNLEG00000012389SMARCA49383.586Nomascus_leucogenys
ENSCVAG00000003018-8196.552ENSOPRG00000000885-7696.552Ochotona_princeps
ENSCVAG00000003018-9882.919ENSODEG00000017127SMARCA49980.935Octodon_degus
ENSCVAG00000003018-9885.750ENSONIG00000008196smarca4a9985.499Oreochromis_niloticus
ENSCVAG00000003018-9990.727ENSONIG00000018040-9989.268Oreochromis_niloticus
ENSCVAG00000003018-9779.633ENSOCUG00000001787SMARCA49879.164Oryctolagus_cuniculus
ENSCVAG00000003018-8993.209ENSORLG00000003955-9987.606Oryzias_latipes
ENSCVAG00000003018-9483.946ENSORLG00000015452smarca4a9983.851Oryzias_latipes
ENSCVAG00000003018-9483.688ENSORLG00020004611smarca4a9983.851Oryzias_latipes_hni
ENSCVAG00000003018-8993.213ENSORLG00020009728-9987.288Oryzias_latipes_hni
ENSCVAG00000003018-9483.688ENSORLG00015016560smarca4a9886.391Oryzias_latipes_hsok
ENSCVAG00000003018-8992.931ENSORLG00015007739-9987.584Oryzias_latipes_hsok
ENSCVAG00000003018-9884.194ENSOMEG00000007486smarca4a9984.070Oryzias_melastigma
ENSCVAG00000003018-8993.759ENSOMEG00000016626-9988.307Oryzias_melastigma
ENSCVAG00000003018-9185.981ENSOGAG00000016148SMARCA410085.635Otolemur_garnettii
ENSCVAG00000003018-9687.212ENSOARG00000017454SMARCA49187.380Ovis_aries
ENSCVAG00000003018-9884.596ENSPPAG00000043191SMARCA49984.283Pan_paniscus
ENSCVAG00000003018-9884.688ENSPPRG00000000064SMARCA49984.312Panthera_pardus
ENSCVAG00000003018-7687.531ENSPTIG00000017447SMARCA49481.057Panthera_tigris_altaica
ENSCVAG00000003018-9884.596ENSPTRG00000010488SMARCA49984.283Pan_troglodytes
ENSCVAG00000003018-9884.524ENSPANG00000011042SMARCA49884.211Papio_anubis
ENSCVAG00000003018-9486.040ENSPKIG00000010087-9685.003Paramormyrops_kingsleyae
ENSCVAG00000003018-9885.476ENSPKIG00000007770SMARCA49984.663Paramormyrops_kingsleyae
ENSCVAG00000003018-9879.093ENSPSIG00000005547SMARCA49977.947Pelodiscus_sinensis
ENSCVAG00000003018-9884.375ENSPEMG00000020389Smarca49983.938Peromyscus_maniculatus_bairdii
ENSCVAG00000003018-9884.909ENSPCIG00000017138SMARCA49984.451Phascolarctos_cinereus
ENSCVAG00000003018-9992.331ENSPFOG00000012930-9991.312Poecilia_formosa
ENSCVAG00000003018-9882.644ENSPFOG00000007892smarca4a9982.767Poecilia_formosa
ENSCVAG00000003018-9882.829ENSPLAG00000014294smarca4a9982.952Poecilia_latipinna
ENSCVAG00000003018-9995.315ENSPLAG00000018616-9995.315Poecilia_latipinna
ENSCVAG00000003018-9685.510ENSPMEG00000003725smarca4a9585.640Poecilia_mexicana
ENSCVAG00000003018-9992.857ENSPMEG00000008929-9993.233Poecilia_mexicana
ENSCVAG00000003018-9881.549ENSPREG00000014608smarca4a9982.266Poecilia_reticulata
ENSCVAG00000003018-9694.824ENSPREG00000014823-9593.550Poecilia_reticulata
ENSCVAG00000003018-9882.883ENSPPYG00000009568SMARCA49982.147Pongo_abelii
ENSCVAG00000003018-7874.734ENSPCAG00000014054SMARCA47774.202Procavia_capensis
ENSCVAG00000003018-9884.721ENSPCOG00000023011SMARCA49984.188Propithecus_coquereli
ENSCVAG00000003018-9382.298ENSPVAG00000007787SMARCA49481.168Pteropus_vampyrus
ENSCVAG00000003018-9687.573ENSPNYG00000000717smarca4a9586.923Pundamilia_nyererei
ENSCVAG00000003018-9690.812ENSPNYG00000023995-9692.876Pundamilia_nyererei
ENSCVAG00000003018-9689.034ENSPNAG00000006636-9289.484Pygocentrus_nattereri
ENSCVAG00000003018-9884.534ENSRNOG00000009271Smarca49984.095Rattus_norvegicus
ENSCVAG00000003018-9884.534ENSRBIG00000038696SMARCA49884.220Rhinopithecus_bieti
ENSCVAG00000003018-9884.596ENSRROG00000045509SMARCA49984.283Rhinopithecus_roxellana
ENSCVAG00000003018-9884.534ENSSBOG00000026896SMARCA49984.283Saimiri_boliviensis_boliviensis
ENSCVAG00000003018-9884.659ENSSHAG00000001642SMARCA49984.326Sarcophilus_harrisii
ENSCVAG00000003018-9885.187ENSSFOG00015013823smarca49984.848Scleropages_formosus
ENSCVAG00000003018-8988.956ENSSFOG00015009921-9288.589Scleropages_formosus
ENSCVAG00000003018-9884.994ENSSMAG00000003200smarca4a9785.120Scophthalmus_maximus
ENSCVAG00000003018-9689.288ENSSMAG00000014082-9986.044Scophthalmus_maximus
ENSCVAG00000003018-9992.879ENSSDUG00000005388-9791.111Seriola_dumerili
ENSCVAG00000003018-9881.778ENSSDUG00000017298smarca4a9981.516Seriola_dumerili
ENSCVAG00000003018-9883.946ENSSLDG00000024486smarca4a10085.872Seriola_lalandi_dorsalis
ENSCVAG00000003018-9696.210ENSSLDG00000023663-9696.213Seriola_lalandi_dorsalis
ENSCVAG00000003018-6197.516ENSSARG00000013477SMARCA48297.516Sorex_araneus
ENSCVAG00000003018-9683.824ENSSPUG00000004558SMARCA49683.213Sphenodon_punctatus
ENSCVAG00000003018-9993.590ENSSPAG00000012533-9893.654Stegastes_partitus
ENSCVAG00000003018-9883.395ENSSPAG00000004248smarca4a9982.957Stegastes_partitus
ENSCVAG00000003018-9884.750ENSSSCG00000013629SMARCA49984.375Sus_scrofa
ENSCVAG00000003018-5385.006ENSTGUG00000015488-9884.780Taeniopygia_guttata
ENSCVAG00000003018-9181.148ENSTRUG00000004885smarca4a10081.229Takifugu_rubripes
ENSCVAG00000003018-9689.582ENSTRUG00000001378SMARCA49788.303Takifugu_rubripes
ENSCVAG00000003018-9890.012ENSTNIG00000004536SMARCA49989.638Tetraodon_nigroviridis
ENSCVAG00000003018-7484.397ENSTNIG00000004859-10084.487Tetraodon_nigroviridis
ENSCVAG00000003018-9881.941ENSTTRG00000009519SMARCA49981.204Tursiops_truncatus
ENSCVAG00000003018-9884.784ENSUAMG00000014661SMARCA49984.408Ursus_americanus
ENSCVAG00000003018-9681.860ENSUMAG00000022005SMARCA49887.614Ursus_maritimus
ENSCVAG00000003018-9687.739ENSVVUG00000017820SMARCA49684.408Vulpes_vulpes
ENSCVAG00000003018-9882.272ENSXETG00000009355smarca49983.317Xenopus_tropicalis
ENSCVAG00000003018-9990.408ENSXCOG00000013494-9990.909Xiphophorus_couchianus
ENSCVAG00000003018-9883.013ENSXMAG00000006321smarca4a10084.156Xiphophorus_maculatus
ENSCVAG00000003018-9992.896ENSXMAG00000007030-9992.414Xiphophorus_maculatus

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