EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2927 bases
Position: chrKL652895.1:528714-531640
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002014	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012450	-	1730	-	ENSCVAP00000002014	289 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003054	-	54	33.939	ENSCVAG00000009848	-	79	33.939
ENSCVAG00000003054	-	64	37.879	ENSCVAG00000021672	-	90	37.879
ENSCVAG00000003054	-	65	30.348	ENSCVAG00000015817	-	63	30.348
ENSCVAG00000003054	-	52	33.333	ENSCVAG00000023293	-	71	33.333
ENSCVAG00000003054	-	65	37.186	ENSCVAG00000003277	-	90	37.186
ENSCVAG00000003054	-	75	31.839	ENSCVAG00000023434	-	78	31.839
ENSCVAG00000003054	-	67	31.053	ENSCVAG00000015638	-	79	31.053
ENSCVAG00000003054	-	70	31.100	ENSCVAG00000009825	-	74	31.100
ENSCVAG00000003054	-	76	35.841	ENSCVAG00000010264	-	59	37.168
ENSCVAG00000003054	-	61	38.503	ENSCVAG00000013717	-	82	38.503
ENSCVAG00000003054	-	85	38.824	ENSCVAG00000012268	-	82	38.824
ENSCVAG00000003054	-	77	30.769	ENSCVAG00000005473	-	85	30.769
ENSCVAG00000003054	-	83	34.496	ENSCVAG00000007827	-	89	34.496
ENSCVAG00000003054	-	67	32.692	ENSCVAG00000021126	-	70	32.692
ENSCVAG00000003054	-	80	31.502	ENSCVAG00000005487	-	69	34.310
ENSCVAG00000003054	-	65	37.629	ENSCVAG00000001617	-	79	37.436
ENSCVAG00000003054	-	54	33.750	ENSCVAG00000017220	-	90	33.750
ENSCVAG00000003054	-	72	30.374	ENSCVAG00000018798	-	70	31.163
ENSCVAG00000003054	-	75	37.333	ENSCVAG00000005778	-	78	37.333
ENSCVAG00000003054	-	74	35.556	ENSCVAG00000007463	-	71	35.841
ENSCVAG00000003054	-	66	34.653	ENSCVAG00000018769	-	85	34.653
ENSCVAG00000003054	-	73	35.160	ENSCVAG00000018876	-	98	35.160
ENSCVAG00000003054	-	65	35.450	ENSCVAG00000014872	-	81	35.233
ENSCVAG00000003054	-	69	32.394	ENSCVAG00000009295	-	86	32.394
ENSCVAG00000003054	-	76	34.615	ENSCVAG00000017209	-	62	36.000
ENSCVAG00000003054	-	75	31.760	ENSCVAG00000020148	-	55	31.760
ENSCVAG00000003054	-	74	34.956	ENSCVAG00000007454	-	84	34.956
ENSCVAG00000003054	-	81	31.538	ENSCVAG00000009934	-	73	31.538
ENSCVAG00000003054	-	80	31.474	ENSCVAG00000005762	-	85	31.474
ENSCVAG00000003054	-	62	32.979	ENSCVAG00000009808	-	78	32.979
ENSCVAG00000003054	-	78	34.274	ENSCVAG00000001601	-	95	35.081
ENSCVAG00000003054	-	66	35.567	ENSCVAG00000000740	-	62	34.043
ENSCVAG00000003054	-	76	36.564	ENSCVAG00000009854	-	69	36.564
ENSCVAG00000003054	-	82	32.000	ENSCVAG00000000429	-	77	32.000
ENSCVAG00000003054	-	74	30.172	ENSCVAG00000005676	-	55	30.172
ENSCVAG00000003054	-	80	33.333	ENSCVAG00000018802	-	86	33.333
ENSCVAG00000003054	-	69	33.981	ENSCVAG00000018895	-	93	33.981
ENSCVAG00000003054	-	62	34.946	ENSCVAG00000014831	-	76	34.946
ENSCVAG00000003054	-	65	33.163	ENSCVAG00000007737	-	86	33.163
ENSCVAG00000003054	-	72	33.333	ENSCVAG00000002876	-	72	33.333
ENSCVAG00000003054	-	69	31.707	ENSCVAG00000004346	-	85	31.707
ENSCVAG00000003054	-	56	33.918	ENSCVAG00000019639	-	82	33.918
ENSCVAG00000003054	-	77	33.621	ENSCVAG00000010232	-	81	34.483
ENSCVAG00000003054	-	65	37.000	ENSCVAG00000023285	-	77	37.000
ENSCVAG00000003054	-	85	31.907	ENSCVAG00000009387	-	73	31.907
ENSCVAG00000003054	-	67	32.143	ENSCVAG00000011321	-	90	32.143
ENSCVAG00000003054	-	77	37.004	ENSCVAG00000003302	-	84	37.004
ENSCVAG00000003054	-	74	34.389	ENSCVAG00000003300	-	64	33.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003054	-	92	36.803	ENSAPOG00000006502	-	56	36.803	Acanthochromis_polyacanthus
ENSCVAG00000003054	-	96	69.065	ENSAPOG00000019154	-	61	69.065	Acanthochromis_polyacanthus
ENSCVAG00000003054	-	62	44.382	ENSACIG00000007737	-	71	43.784	Amphilophus_citrinellus
ENSCVAG00000003054	-	72	71.292	ENSACIG00000007725	-	77	71.292	Amphilophus_citrinellus
ENSCVAG00000003054	-	63	42.308	ENSACIG00000009811	-	77	42.308	Amphilophus_citrinellus
ENSCVAG00000003054	-	81	35.833	ENSAOCG00000003425	-	89	35.833	Amphiprion_ocellaris
ENSCVAG00000003054	-	93	43.498	ENSAOCG00000004579	-	86	41.410	Amphiprion_ocellaris
ENSCVAG00000003054	-	84	46.277	ENSAPEG00000014403	-	70	43.541	Amphiprion_percula
ENSCVAG00000003054	-	95	69.928	ENSAPEG00000001491	-	69	69.928	Amphiprion_percula
ENSCVAG00000003054	-	85	42.365	ENSATEG00000015654	-	84	38.554	Anabas_testudineus
ENSCVAG00000003054	-	68	38.265	ENSATEG00000023053	-	86	38.265	Anabas_testudineus
ENSCVAG00000003054	-	95	43.220	ENSACLG00000014795	-	81	43.220	Astatotilapia_calliptera
ENSCVAG00000003054	-	90	39.485	ENSAMXG00000019109	-	95	39.485	Astyanax_mexicanus
ENSCVAG00000003054	-	63	36.702	ENSAMXG00000026085	-	84	35.169	Astyanax_mexicanus
ENSCVAG00000003054	-	88	42.254	ENSAMXG00000021387	-	68	42.254	Astyanax_mexicanus
ENSCVAG00000003054	-	61	36.723	ENSAMXG00000009216	-	85	36.723	Astyanax_mexicanus
ENSCVAG00000003054	-	88	45.188	ENSAMXG00000030744	-	95	44.934	Astyanax_mexicanus
ENSCVAG00000003054	-	90	34.862	ENSAMXG00000033117	-	98	34.934	Astyanax_mexicanus
ENSCVAG00000003054	-	87	37.000	ENSAMXG00000006064	-	77	37.000	Astyanax_mexicanus
ENSCVAG00000003054	-	94	64.103	ENSCSEG00000021519	-	83	60.606	Cynoglossus_semilaevis
ENSCVAG00000003054	-	85	53.878	ENSDARG00000063481	si:ch211-214j24.15	67	52.896	Danio_rerio
ENSCVAG00000003054	-	74	46.512	ENSDARG00000102683	CR626941.1	81	46.512	Danio_rerio
ENSCVAG00000003054	-	63	33.696	ENSELUG00000018709	-	69	33.621	Esox_lucius
ENSCVAG00000003054	-	70	50.244	ENSELUG00000018192	-	97	50.244	Esox_lucius
ENSCVAG00000003054	-	65	34.375	ENSELUG00000003217	-	79	34.375	Esox_lucius
ENSCVAG00000003054	-	65	54.011	ENSELUG00000024502	-	69	54.011	Esox_lucius
ENSCVAG00000003054	-	64	41.304	ENSFHEG00000020783	-	82	41.304	Fundulus_heteroclitus
ENSCVAG00000003054	-	66	85.864	ENSFHEG00000023334	-	75	85.864	Fundulus_heteroclitus
ENSCVAG00000003054	-	64	49.738	ENSGMOG00000001626	-	100	43.889	Gadus_morhua
ENSCVAG00000003054	-	64	38.547	ENSGAFG00000020826	-	81	38.547	Gambusia_affinis
ENSCVAG00000003054	-	74	43.519	ENSHBUG00000016284	-	99	43.519	Haplochromis_burtoni
ENSCVAG00000003054	-	94	34.182	ENSHBUG00000001242	-	68	34.182	Haplochromis_burtoni
ENSCVAG00000003054	-	93	55.720	ENSHBUG00000008326	-	100	56.410	Haplochromis_burtoni
ENSCVAG00000003054	-	64	36.316	ENSIPUG00000013342	-	78	33.745	Ictalurus_punctatus
ENSCVAG00000003054	-	91	41.423	ENSKMAG00000004774	-	77	41.423	Kryptolebias_marmoratus
ENSCVAG00000003054	-	62	42.667	ENSKMAG00000014764	-	75	42.667	Kryptolebias_marmoratus
ENSCVAG00000003054	-	65	41.361	ENSKMAG00000014605	-	62	41.361	Kryptolebias_marmoratus
ENSCVAG00000003054	-	97	71.429	ENSKMAG00000009600	-	99	71.429	Kryptolebias_marmoratus
ENSCVAG00000003054	-	79	40.254	ENSLBEG00000019652	-	82	40.000	Labrus_bergylta
ENSCVAG00000003054	-	66	45.078	ENSLOCG00000000385	-	76	41.453	Lepisosteus_oculatus
ENSCVAG00000003054	-	80	37.759	ENSLOCG00000016496	-	68	37.759	Lepisosteus_oculatus
ENSCVAG00000003054	-	70	46.766	ENSLOCG00000000082	-	89	45.000	Lepisosteus_oculatus
ENSCVAG00000003054	-	67	47.150	ENSLOCG00000000517	-	73	44.304	Lepisosteus_oculatus
ENSCVAG00000003054	-	78	44.444	ENSLOCG00000018072	-	97	43.750	Lepisosteus_oculatus
ENSCVAG00000003054	-	66	45.361	ENSLOCG00000017852	-	87	41.949	Lepisosteus_oculatus
ENSCVAG00000003054	-	78	39.914	ENSLOCG00000012075	-	96	41.627	Lepisosteus_oculatus
ENSCVAG00000003054	-	76	36.986	ENSMAMG00000021970	-	95	36.986	Mastacembelus_armatus
ENSCVAG00000003054	-	95	70.690	ENSMAMG00000021969	-	59	70.690	Mastacembelus_armatus
ENSCVAG00000003054	-	76	46.632	ENSMAMG00000015600	-	80	43.162	Mastacembelus_armatus
ENSCVAG00000003054	-	71	44.444	ENSMMOG00000012876	-	64	44.444	Mola_mola
ENSCVAG00000003054	-	81	33.712	ENSMMOG00000016860	-	90	33.712	Mola_mola
ENSCVAG00000003054	-	66	36.548	ENSMMOG00000016864	-	75	38.071	Mola_mola
ENSCVAG00000003054	-	73	41.232	ENSNBRG00000002136	-	72	41.232	Neolamprologus_brichardi
ENSCVAG00000003054	-	94	65.201	ENSORLG00000002537	-	68	65.201	Oryzias_latipes
ENSCVAG00000003054	-	83	44.700	ENSORLG00000002031	-	66	44.700	Oryzias_latipes
ENSCVAG00000003054	-	63	37.912	ENSORLG00020017387	-	78	37.912	Oryzias_latipes_hni
ENSCVAG00000003054	-	91	42.373	ENSORLG00020008286	-	86	42.373	Oryzias_latipes_hni
ENSCVAG00000003054	-	83	44.700	ENSORLG00020008323	-	65	44.700	Oryzias_latipes_hni
ENSCVAG00000003054	-	95	65.693	ENSORLG00020011284	-	81	65.693	Oryzias_latipes_hni
ENSCVAG00000003054	-	60	38.728	ENSORLG00015023234	-	89	38.728	Oryzias_latipes_hsok
ENSCVAG00000003054	-	94	65.441	ENSORLG00015004110	-	68	65.441	Oryzias_latipes_hsok
ENSCVAG00000003054	-	83	44.240	ENSORLG00015004522	-	64	44.240	Oryzias_latipes_hsok
ENSCVAG00000003054	-	90	44.017	ENSOMEG00000010594	-	89	43.404	Oryzias_melastigma
ENSCVAG00000003054	-	95	66.788	ENSOMEG00000020433	-	90	66.788	Oryzias_melastigma
ENSCVAG00000003054	-	81	49.145	ENSPKIG00000017688	-	83	49.145	Paramormyrops_kingsleyae
ENSCVAG00000003054	-	65	51.852	ENSPKIG00000017193	-	81	51.852	Paramormyrops_kingsleyae
ENSCVAG00000003054	-	79	63.090	ENSPMGG00000014055	-	95	63.090	Periophthalmus_magnuspinnatus
ENSCVAG00000003054	-	78	33.778	ENSPMGG00000014056	-	85	33.778	Periophthalmus_magnuspinnatus
ENSCVAG00000003054	-	64	40.625	ENSPMGG00000017993	-	75	40.625	Periophthalmus_magnuspinnatus
ENSCVAG00000003054	-	88	42.489	ENSPFOG00000015865	-	99	42.489	Poecilia_formosa
ENSCVAG00000003054	-	63	41.143	ENSPFOG00000006124	-	79	41.143	Poecilia_formosa
ENSCVAG00000003054	-	77	37.391	ENSPFOG00000022479	-	95	37.391	Poecilia_formosa
ENSCVAG00000003054	-	91	39.350	ENSPFOG00000012732	-	86	39.350	Poecilia_formosa
ENSCVAG00000003054	-	75	41.818	ENSPFOG00000005689	si:dkey-185m8.2	79	41.818	Poecilia_formosa
ENSCVAG00000003054	-	92	38.393	ENSPFOG00000022853	-	99	38.393	Poecilia_formosa
ENSCVAG00000003054	-	94	42.291	ENSPFOG00000016787	-	94	42.291	Poecilia_formosa
ENSCVAG00000003054	-	88	40.171	ENSPFOG00000015875	-	92	40.171	Poecilia_formosa
ENSCVAG00000003054	-	89	42.396	ENSPFOG00000015871	-	86	42.396	Poecilia_formosa
ENSCVAG00000003054	-	88	41.597	ENSPFOG00000013349	-	81	41.597	Poecilia_formosa
ENSCVAG00000003054	-	81	43.478	ENSPFOG00000000191	-	77	43.478	Poecilia_formosa
ENSCVAG00000003054	-	91	38.235	ENSPFOG00000013109	-	99	39.167	Poecilia_formosa
ENSCVAG00000003054	-	75	34.426	ENSPLAG00000018664	-	89	34.426	Poecilia_latipinna
ENSCVAG00000003054	-	90	39.502	ENSPLAG00000003020	-	91	39.502	Poecilia_latipinna
ENSCVAG00000003054	-	62	38.333	ENSPLAG00000018911	-	66	38.333	Poecilia_latipinna
ENSCVAG00000003054	-	65	42.408	ENSPLAG00000018606	-	73	42.408	Poecilia_latipinna
ENSCVAG00000003054	-	75	32.331	ENSPLAG00000018692	-	96	33.459	Poecilia_latipinna
ENSCVAG00000003054	-	72	45.055	ENSPLAG00000020776	-	86	45.055	Poecilia_latipinna
ENSCVAG00000003054	-	76	34.361	ENSPMEG00000010605	-	86	34.361	Poecilia_mexicana
ENSCVAG00000003054	-	75	34.914	ENSPMEG00000006334	-	80	34.914	Poecilia_mexicana
ENSCVAG00000003054	-	75	33.083	ENSPMEG00000000724	-	72	33.083	Poecilia_mexicana
ENSCVAG00000003054	-	91	41.631	ENSPMEG00000005912	-	86	41.423	Poecilia_mexicana
ENSCVAG00000003054	-	55	42.331	ENSPMEG00000020252	-	72	42.331	Poecilia_mexicana
ENSCVAG00000003054	-	94	41.850	ENSPMEG00000000604	-	75	41.850	Poecilia_mexicana
ENSCVAG00000003054	-	62	37.778	ENSPMEG00000018950	-	66	37.778	Poecilia_mexicana
ENSCVAG00000003054	-	78	41.558	ENSPMEG00000020297	-	82	41.558	Poecilia_mexicana
ENSCVAG00000003054	-	94	41.778	ENSPREG00000020440	-	75	41.778	Poecilia_reticulata
ENSCVAG00000003054	-	81	42.678	ENSPREG00000001250	-	93	42.678	Poecilia_reticulata
ENSCVAG00000003054	-	77	42.918	ENSPREG00000001530	-	72	42.918	Poecilia_reticulata
ENSCVAG00000003054	-	79	39.149	ENSPNYG00000010004	-	83	39.149	Pundamilia_nyererei
ENSCVAG00000003054	-	84	41.784	ENSPNAG00000014932	-	67	41.784	Pygocentrus_nattereri
ENSCVAG00000003054	-	82	42.640	ENSPNAG00000013132	-	67	42.640	Pygocentrus_nattereri
ENSCVAG00000003054	-	77	39.462	ENSPNAG00000019899	-	90	39.462	Pygocentrus_nattereri
ENSCVAG00000003054	-	84	43.388	ENSPNAG00000002097	-	97	43.388	Pygocentrus_nattereri
ENSCVAG00000003054	-	64	36.508	ENSPNAG00000025850	-	79	34.783	Pygocentrus_nattereri
ENSCVAG00000003054	-	78	38.496	ENSSFOG00015002420	-	82	38.496	Scleropages_formosus
ENSCVAG00000003054	-	70	33.168	ENSSFOG00015002507	-	77	33.168	Scleropages_formosus
ENSCVAG00000003054	-	76	35.841	ENSSFOG00015002503	-	85	35.841	Scleropages_formosus
ENSCVAG00000003054	-	94	63.370	ENSSMAG00000012187	-	68	63.370	Scophthalmus_maximus
ENSCVAG00000003054	-	85	70.161	ENSSDUG00000022299	-	95	70.161	Seriola_dumerili
ENSCVAG00000003054	-	75	46.465	ENSSLDG00000009168	-	97	46.957	Seriola_lalandi_dorsalis
ENSCVAG00000003054	-	84	44.928	ENSSLDG00000010531	-	95	45.291	Seriola_lalandi_dorsalis
ENSCVAG00000003054	-	95	65.818	ENSSLDG00000005786	-	67	65.818	Seriola_lalandi_dorsalis
ENSCVAG00000003054	-	91	72.348	ENSSPAG00000017616	-	89	72.348	Stegastes_partitus
ENSCVAG00000003054	-	67	47.030	ENSSPAG00000015927	-	80	47.030	Stegastes_partitus
ENSCVAG00000003054	-	79	41.810	ENSTRUG00000018070	-	78	41.810	Takifugu_rubripes
ENSCVAG00000003054	-	82	37.395	ENSTRUG00000020422	-	82	37.395	Takifugu_rubripes
ENSCVAG00000003054	-	79	51.965	ENSTNIG00000004275	-	97	51.965	Tetraodon_nigroviridis
ENSCVAG00000003054	-	75	49.776	ENSTNIG00000004220	-	92	49.776	Tetraodon_nigroviridis
ENSCVAG00000003054	-	75	41.818	ENSXCOG00000009005	-	92	39.834	Xiphophorus_couchianus
ENSCVAG00000003054	-	78	42.616	ENSXCOG00000018421	-	99	42.616	Xiphophorus_couchianus
ENSCVAG00000003054	-	88	39.924	ENSXMAG00000023360	-	83	39.924	Xiphophorus_maculatus