EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003072 (Gene tree)
Gene ID: 107086191
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 22466 bases
Position: chrKL652644.1:349632-372097
Accession: 107086191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021156	rRNA_proc-arch	PF13234.6	8.6e-31	1	1
ENSCVAP00000021142	rRNA_proc-arch	PF13234.6	8.8e-31	1	1
ENSCVAP00000001938	rRNA_proc-arch	PF13234.6	3.8e-27	1	1
ENSCVAP00000001938	DEAD	PF00270.29	1.4e-16	1	1
ENSCVAP00000021156	DEAD	PF00270.29	1.5e-16	1	1
ENSCVAP00000021142	DEAD	PF00270.29	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012540	-	4209	XM_015376975	ENSCVAP00000021142	1246 (aa)	XP_015232461	UPI000742ABD9
ENSCVAT00000012517	-	4316	-	ENSCVAP00000021156	1235 (aa)	-	-
ENSCVAT00000012573	-	3528	-	ENSCVAP00000001938	1175 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003072	skiv2l	80	36.045	ENSCVAG00000004556	mtrex	90	35.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003072	skiv2l	99	61.156	ENSG00000204351	SKIV2L	99	61.133	Homo_sapiens
ENSCVAG00000003072	skiv2l	100	89.717	ENSAPOG00000008257	skiv2l	100	89.647	Acanthochromis_polyacanthus
ENSCVAG00000003072	skiv2l	99	61.075	ENSAMEG00000002078	SKIV2L	99	61.293	Ailuropoda_melanoleuca
ENSCVAG00000003072	skiv2l	100	88.178	ENSACIG00000016719	skiv2l	100	88.178	Amphilophus_citrinellus
ENSCVAG00000003072	skiv2l	100	90.040	ENSAOCG00000017352	skiv2l	100	89.968	Amphiprion_ocellaris
ENSCVAG00000003072	skiv2l	100	89.879	ENSAPEG00000001055	skiv2l	100	89.807	Amphiprion_percula
ENSCVAG00000003072	skiv2l	100	90.449	ENSATEG00000007601	skiv2l	100	90.449	Anabas_testudineus
ENSCVAG00000003072	skiv2l	96	68.756	ENSACAG00000011746	SKIV2L	99	63.515	Anolis_carolinensis
ENSCVAG00000003072	skiv2l	99	61.717	ENSANAG00000037992	SKIV2L	99	61.692	Aotus_nancymaae
ENSCVAG00000003072	skiv2l	100	89.798	ENSACLG00000006886	skiv2l	100	89.888	Astatotilapia_calliptera
ENSCVAG00000003072	skiv2l	100	82.734	ENSAMXG00000011517	skiv2l	100	82.974	Astyanax_mexicanus
ENSCVAG00000003072	skiv2l	99	61.156	ENSBTAG00000005587	SKIV2L	99	61.373	Bos_taurus
ENSCVAG00000003072	skiv2l	96	41.505	WBGene00008502	skih-2	99	41.505	Caenorhabditis_elegans
ENSCVAG00000003072	skiv2l	99	61.557	ENSCJAG00000002263	SKIV2L	99	61.532	Callithrix_jacchus
ENSCVAG00000003072	skiv2l	99	61.026	ENSCAFG00000000679	SKIV2L	99	61.244	Canis_familiaris
ENSCVAG00000003072	skiv2l	99	61.026	ENSCAFG00020000948	SKIV2L	99	61.244	Canis_lupus_dingo
ENSCVAG00000003072	skiv2l	99	61.316	ENSCHIG00000012897	SKIV2L	99	61.532	Capra_hircus
ENSCVAG00000003072	skiv2l	99	61.062	ENSTSYG00000012133	SKIV2L	99	61.200	Carlito_syrichta
ENSCVAG00000003072	skiv2l	99	61.066	ENSCPOG00000001307	SKIV2L	99	60.978	Cavia_porcellus
ENSCVAG00000003072	skiv2l	99	61.637	ENSCCAG00000026206	SKIV2L	99	61.612	Cebus_capucinus
ENSCVAG00000003072	skiv2l	99	60.995	ENSCATG00000036901	SKIV2L	99	61.213	Cercocebus_atys
ENSCVAG00000003072	skiv2l	99	61.075	ENSCLAG00000007678	SKIV2L	99	61.053	Chinchilla_lanigera
ENSCVAG00000003072	skiv2l	99	61.508	ENSCSAG00000008988	SKIV2L	99	61.483	Chlorocebus_sabaeus
ENSCVAG00000003072	skiv2l	84	69.352	ENSCPBG00000000343	SKIV2L	99	60.217	Chrysemys_picta_bellii
ENSCVAG00000003072	skiv2l	94	50.643	ENSCING00000005576	-	99	50.643	Ciona_intestinalis
ENSCVAG00000003072	skiv2l	99	61.236	ENSCANG00000039709	SKIV2L	100	60.556	Colobus_angolensis_palliatus
ENSCVAG00000003072	skiv2l	99	61.576	ENSCGRG00001008385	Skiv2l	99	61.502	Cricetulus_griseus_chok1gshd
ENSCVAG00000003072	skiv2l	100	86.015	ENSCSEG00000011326	skiv2l	99	86.095	Cynoglossus_semilaevis
ENSCVAG00000003072	skiv2l	100	84.093	ENSDARG00000062206	skiv2l	100	84.093	Danio_rerio
ENSCVAG00000003072	skiv2l	93	65.380	ENSDNOG00000037590	SKIV2L	93	65.617	Dasypus_novemcinctus
ENSCVAG00000003072	skiv2l	94	44.702	FBgn0039117	tst	97	44.785	Drosophila_melanogaster
ENSCVAG00000003072	skiv2l	72	70.886	ENSETEG00000009522	SKIV2L	69	70.886	Echinops_telfairi
ENSCVAG00000003072	skiv2l	90	59.199	ENSEBUG00000013680	-	98	53.952	Eptatretus_burgeri
ENSCVAG00000003072	skiv2l	94	62.169	ENSEASG00005015534	SKIV2L	100	62.606	Equus_asinus_asinus
ENSCVAG00000003072	skiv2l	94	61.342	ENSECAG00000021823	SKIV2L	95	61.571	Equus_caballus
ENSCVAG00000003072	skiv2l	53	73.123	ENSEEUG00000005049	SKIV2L	56	73.518	Erinaceus_europaeus
ENSCVAG00000003072	skiv2l	100	84.640	ENSELUG00000000181	skiv2l	100	84.640	Esox_lucius
ENSCVAG00000003072	skiv2l	97	65.346	ENSFCAG00000004519	SKIV2L	99	61.404	Felis_catus
ENSCVAG00000003072	skiv2l	95	65.249	ENSFDAG00000009438	SKIV2L	99	60.176	Fukomys_damarensis
ENSCVAG00000003072	skiv2l	100	94.008	ENSFHEG00000008853	skiv2l	100	93.981	Fundulus_heteroclitus
ENSCVAG00000003072	skiv2l	99	80.910	ENSGMOG00000005926	skiv2l	99	80.910	Gadus_morhua
ENSCVAG00000003072	skiv2l	80	56.920	ENSGALG00000035499	SKIV2L	98	56.907	Gallus_gallus
ENSCVAG00000003072	skiv2l	100	94.980	ENSGAFG00000002382	skiv2l	100	94.944	Gambusia_affinis
ENSCVAG00000003072	skiv2l	100	88.489	ENSGACG00000002927	skiv2l	99	88.620	Gasterosteus_aculeatus
ENSCVAG00000003072	skiv2l	99	61.236	ENSGGOG00000002270	SKIV2L	99	61.213	Gorilla_gorilla
ENSCVAG00000003072	skiv2l	100	89.879	ENSHBUG00000000726	skiv2l	100	89.968	Haplochromis_burtoni
ENSCVAG00000003072	skiv2l	95	66.253	ENSHGLG00000016596	SKIV2L	99	60.797	Heterocephalus_glaber_female
ENSCVAG00000003072	skiv2l	95	64.382	ENSHGLG00100014161	SKIV2L	99	59.124	Heterocephalus_glaber_male
ENSCVAG00000003072	skiv2l	98	85.000	ENSHCOG00000007191	skiv2l	100	85.000	Hippocampus_comes
ENSCVAG00000003072	skiv2l	100	81.680	ENSIPUG00000016263	skiv2l	100	82.276	Ictalurus_punctatus
ENSCVAG00000003072	skiv2l	100	61.293	ENSSTOG00000014596	SKIV2L	99	61.612	Ictidomys_tridecemlineatus
ENSCVAG00000003072	skiv2l	51	84.328	ENSLACG00000002986	-	60	63.946	Latimeria_chalumnae
ENSCVAG00000003072	skiv2l	99	61.142	ENSLAFG00000014231	SKIV2L	99	61.293	Loxodonta_africana
ENSCVAG00000003072	skiv2l	99	61.316	ENSMFAG00000034235	SKIV2L	99	61.532	Macaca_fascicularis
ENSCVAG00000003072	skiv2l	99	61.316	ENSMMUG00000000736	SKIV2L	99	61.532	Macaca_mulatta
ENSCVAG00000003072	skiv2l	99	61.316	ENSMNEG00000044474	SKIV2L	99	61.532	Macaca_nemestrina
ENSCVAG00000003072	skiv2l	99	60.995	ENSMLEG00000030512	SKIV2L	99	61.213	Mandrillus_leucophaeus
ENSCVAG00000003072	skiv2l	100	89.165	ENSMAMG00000002927	skiv2l	100	89.165	Mastacembelus_armatus
ENSCVAG00000003072	skiv2l	100	89.717	ENSMZEG00005026415	skiv2l	100	89.807	Maylandia_zebra
ENSCVAG00000003072	skiv2l	65	68.400	ENSMGAG00000001320	SKIV2L	86	68.400	Meleagris_gallopavo
ENSCVAG00000003072	skiv2l	99	61.285	ENSMAUG00000018613	Skiv2l	99	61.342	Mesocricetus_auratus
ENSCVAG00000003072	skiv2l	99	61.588	ENSMICG00000046331	SKIV2L	99	61.882	Microcebus_murinus
ENSCVAG00000003072	skiv2l	96	64.615	ENSMOCG00000014240	Skiv2l	99	60.352	Microtus_ochrogaster
ENSCVAG00000003072	skiv2l	99	86.661	ENSMMOG00000014547	skiv2l	99	86.661	Mola_mola
ENSCVAG00000003072	skiv2l	96	67.218	ENSMODG00000015052	SKIV2L	99	61.532	Monodelphis_domestica
ENSCVAG00000003072	skiv2l	100	83.655	ENSMALG00000010535	skiv2l	99	83.655	Monopterus_albus
ENSCVAG00000003072	skiv2l	99	61.267	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.164	Mus_caroli
ENSCVAG00000003072	skiv2l	99	60.932	ENSMUSG00000040356	Skiv2l	99	61.085	Mus_musculus
ENSCVAG00000003072	skiv2l	99	61.334	MGP_PahariEiJ_G0020472	Skiv2l	99	61.483	Mus_pahari
ENSCVAG00000003072	skiv2l	99	60.772	MGP_SPRETEiJ_G0022382	Skiv2l	99	60.925	Mus_spretus
ENSCVAG00000003072	skiv2l	99	60.786	ENSMPUG00000010567	SKIV2L	99	61.404	Mustela_putorius_furo
ENSCVAG00000003072	skiv2l	99	60.866	ENSMLUG00000000628	SKIV2L	99	60.845	Myotis_lucifugus
ENSCVAG00000003072	skiv2l	100	86.235	ENSNBRG00000018650	skiv2l	99	86.559	Neolamprologus_brichardi
ENSCVAG00000003072	skiv2l	99	60.467	ENSNLEG00000006451	SKIV2L	100	60.319	Nomascus_leucogenys
ENSCVAG00000003072	skiv2l	73	67.776	ENSMEUG00000006072	SKIV2L	78	62.500	Notamacropus_eugenii
ENSCVAG00000003072	skiv2l	97	65.346	ENSOPRG00000003972	SKIV2L	99	60.987	Ochotona_princeps
ENSCVAG00000003072	skiv2l	95	65.909	ENSODEG00000017516	SKIV2L	99	61.053	Octodon_degus
ENSCVAG00000003072	skiv2l	100	90.607	ENSONIG00000013500	skiv2l	100	90.449	Oreochromis_niloticus
ENSCVAG00000003072	skiv2l	99	61.477	ENSOCUG00000007019	SKIV2L	99	61.772	Oryctolagus_cuniculus
ENSCVAG00000003072	skiv2l	99	90.061	ENSORLG00000002021	skiv2l	100	88.221	Oryzias_latipes
ENSCVAG00000003072	skiv2l	99	89.858	ENSORLG00020009462	skiv2l	100	88.061	Oryzias_latipes_hni
ENSCVAG00000003072	skiv2l	99	89.858	ENSORLG00015016750	skiv2l	100	88.061	Oryzias_latipes_hsok
ENSCVAG00000003072	skiv2l	100	88.350	ENSOMEG00000008531	skiv2l	100	88.212	Oryzias_melastigma
ENSCVAG00000003072	skiv2l	99	61.396	ENSOGAG00000009578	SKIV2L	99	61.373	Otolemur_garnettii
ENSCVAG00000003072	skiv2l	99	57.771	ENSOARG00000002411	-	99	58.002	Ovis_aries
ENSCVAG00000003072	skiv2l	99	60.575	ENSPPAG00000040211	SKIV2L	100	60.506	Pan_paniscus
ENSCVAG00000003072	skiv2l	97	65.549	ENSPPRG00000005017	SKIV2L	99	61.563	Panthera_pardus
ENSCVAG00000003072	skiv2l	97	65.041	ENSPTIG00000021656	SKIV2L	99	61.164	Panthera_tigris_altaica
ENSCVAG00000003072	skiv2l	99	61.156	ENSPTRG00000017997	SKIV2L	99	61.133	Pan_troglodytes
ENSCVAG00000003072	skiv2l	99	60.144	ENSPANG00000011501	SKIV2L	100	60.316	Papio_anubis
ENSCVAG00000003072	skiv2l	100	78.441	ENSPKIG00000011876	skiv2l	100	78.441	Paramormyrops_kingsleyae
ENSCVAG00000003072	skiv2l	99	84.846	ENSPMGG00000019707	skiv2l	99	85.093	Periophthalmus_magnuspinnatus
ENSCVAG00000003072	skiv2l	99	61.093	ENSPEMG00000019001	Skiv2l	99	61.311	Peromyscus_maniculatus_bairdii
ENSCVAG00000003072	skiv2l	96	66.908	ENSPCIG00000018792	SKIV2L	99	61.164	Phascolarctos_cinereus
ENSCVAG00000003072	skiv2l	100	94.332	ENSPFOG00000002424	skiv2l	100	94.302	Poecilia_formosa
ENSCVAG00000003072	skiv2l	100	94.251	ENSPLAG00000018304	skiv2l	100	94.222	Poecilia_latipinna
ENSCVAG00000003072	skiv2l	100	94.575	ENSPMEG00000006997	skiv2l	100	94.543	Poecilia_mexicana
ENSCVAG00000003072	skiv2l	99	91.590	ENSPREG00000002277	skiv2l	99	91.590	Poecilia_reticulata
ENSCVAG00000003072	skiv2l	99	60.835	ENSPPYG00000016472	SKIV2L	99	60.814	Pongo_abelii
ENSCVAG00000003072	skiv2l	78	73.750	ENSPCAG00000004178	SKIV2L	76	67.391	Procavia_capensis
ENSCVAG00000003072	skiv2l	99	61.267	ENSPCOG00000010308	SKIV2L	99	61.563	Propithecus_coquereli
ENSCVAG00000003072	skiv2l	99	61.477	ENSPVAG00000005136	SKIV2L	99	61.453	Pteropus_vampyrus
ENSCVAG00000003072	skiv2l	99	87.648	ENSPNYG00000017853	skiv2l	99	87.648	Pundamilia_nyererei
ENSCVAG00000003072	skiv2l	99	83.929	ENSPNAG00000011823	skiv2l	100	83.654	Pygocentrus_nattereri
ENSCVAG00000003072	skiv2l	99	61.334	ENSRNOG00000000421	Skiv2l	99	61.231	Rattus_norvegicus
ENSCVAG00000003072	skiv2l	99	60.128	ENSRBIG00000035485	SKIV2L	99	60.349	Rhinopithecus_bieti
ENSCVAG00000003072	skiv2l	99	61.316	ENSRROG00000036429	SKIV2L	99	61.532	Rhinopithecus_roxellana
ENSCVAG00000003072	skiv2l	94	39.602	YLR398C	-	93	39.824	Saccharomyces_cerevisiae
ENSCVAG00000003072	skiv2l	99	61.909	ENSSBOG00000027920	SKIV2L	99	61.882	Saimiri_boliviensis_boliviensis
ENSCVAG00000003072	skiv2l	96	67.011	ENSSHAG00000008963	SKIV2L	99	60.304	Sarcophilus_harrisii
ENSCVAG00000003072	skiv2l	99	83.531	ENSSFOG00015016930	skiv2l	100	82.043	Scleropages_formosus
ENSCVAG00000003072	skiv2l	99	89.452	ENSSMAG00000020185	skiv2l	100	88.259	Scophthalmus_maximus
ENSCVAG00000003072	skiv2l	100	89.879	ENSSDUG00000019977	skiv2l	100	89.807	Seriola_dumerili
ENSCVAG00000003072	skiv2l	100	85.058	ENSSLDG00000024382	skiv2l	100	85.058	Seriola_lalandi_dorsalis
ENSCVAG00000003072	skiv2l	98	63.917	ENSSPUG00000012945	SKIV2L	99	60.391	Sphenodon_punctatus
ENSCVAG00000003072	skiv2l	95	90.505	ENSSPAG00000012904	skiv2l	99	90.339	Stegastes_partitus
ENSCVAG00000003072	skiv2l	100	61.373	ENSSSCG00000001424	SKIV2L	100	60.629	Sus_scrofa
ENSCVAG00000003072	skiv2l	70	86.631	ENSTRUG00000000966	skiv2l	100	70.075	Takifugu_rubripes
ENSCVAG00000003072	skiv2l	95	88.935	ENSTNIG00000004382	skiv2l	99	84.087	Tetraodon_nigroviridis
ENSCVAG00000003072	skiv2l	94	62.331	ENSTBEG00000003462	SKIV2L	94	62.331	Tupaia_belangeri
ENSCVAG00000003072	skiv2l	99	57.063	ENSTTRG00000005931	SKIV2L	99	57.302	Tursiops_truncatus
ENSCVAG00000003072	skiv2l	99	61.316	ENSUAMG00000024336	SKIV2L	99	61.532	Ursus_americanus
ENSCVAG00000003072	skiv2l	94	61.925	ENSUMAG00000012666	SKIV2L	100	62.181	Ursus_maritimus
ENSCVAG00000003072	skiv2l	95	65.770	ENSVVUG00000022807	SKIV2L	99	61.164	Vulpes_vulpes
ENSCVAG00000003072	skiv2l	100	59.617	ENSXETG00000010932	skiv2l	99	59.617	Xenopus_tropicalis
ENSCVAG00000003072	skiv2l	100	93.117	ENSXCOG00000019517	skiv2l	97	93.117	Xiphophorus_couchianus
ENSCVAG00000003072	skiv2l	100	94.170	ENSXMAG00000014079	skiv2l	100	94.141	Xiphophorus_maculatus