EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003087 (Gene tree)
Gene ID: 107086163
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4598 bases
Position: chrKL652644.1:345371-349968
Accession: 107086163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021206	RRM_1	PF00076.22	9.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012404	-	1582	XM_015376945	ENSCVAP00000021206	349 (aa)	XP_015232431	UPI0007425AA8

Gene Model

Click here to download ENSCVAG00000003087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003087	nelfe	99	68.497	ENSG00000204356	NELFE	91	76.552	Homo_sapiens
ENSCVAG00000003087	nelfe	99	89.655	ENSAPEG00000001209	nelfe	100	89.655	Amphiprion_percula
ENSCVAG00000003087	nelfe	99	61.942	ENSTSYG00000012132	-	98	64.752	Carlito_syrichta
ENSCVAG00000003087	nelfe	96	58.953	ENSCAPG00000015145	NELFE	89	64.201	Cavia_aperea
ENSCVAG00000003087	nelfe	99	60.695	ENSCPOG00000031829	NELFE	98	65.147	Cavia_porcellus
ENSCVAG00000003087	nelfe	88	58.900	ENSCPBG00000000225	NELFE	97	54.799	Chrysemys_picta_bellii
ENSCVAG00000003087	nelfe	99	64.987	ENSCGRG00001016608	Nelfe	100	65.252	Cricetulus_griseus_chok1gshd
ENSCVAG00000003087	nelfe	93	64.589	ENSCGRG00000014034	Nelfe	93	64.140	Cricetulus_griseus_crigri
ENSCVAG00000003087	nelfe	99	80.460	ENSCSEG00000011352	nelfe	100	83.621	Cynoglossus_semilaevis
ENSCVAG00000003087	nelfe	99	80.460	ENSDARG00000004343	nelfe	100	80.460	Danio_rerio
ENSCVAG00000003087	nelfe	91	58.187	ENSDNOG00000006996	-	94	56.269	Dasypus_novemcinctus
ENSCVAG00000003087	nelfe	99	62.760	ENSDORG00000011705	Nelfe	98	63.896	Dipodomys_ordii
ENSCVAG00000003087	nelfe	99	48.851	ENSEBUG00000017070	nelfe	99	48.276	Eptatretus_burgeri
ENSCVAG00000003087	nelfe	65	77.778	ENSEEUG00000005004	NELFE	59	77.778	Erinaceus_europaeus
ENSCVAG00000003087	nelfe	99	73.521	ENSELUG00000005830	nelfe	100	78.592	Esox_lucius
ENSCVAG00000003087	nelfe	99	72.928	ENSGMOG00000005973	nelfe	100	74.788	Gadus_morhua
ENSCVAG00000003087	nelfe	100	61.714	ENSGALG00000045676	NELFE	99	58.028	Gallus_gallus
ENSCVAG00000003087	nelfe	99	81.322	ENSGACG00000002935	nelfe	100	85.042	Gasterosteus_aculeatus
ENSCVAG00000003087	nelfe	99	64.756	ENSGAGG00000005411	NELFE	100	59.890	Gopherus_agassizii
ENSCVAG00000003087	nelfe	99	63.115	ENSGGOG00000002265	NELFE	98	62.663	Gorilla_gorilla
ENSCVAG00000003087	nelfe	100	87.714	ENSHBUG00000023659	nelfe	100	87.714	Haplochromis_burtoni
ENSCVAG00000003087	nelfe	71	56.929	ENSHGLG00000016601	NELFE	92	54.296	Heterocephalus_glaber_female
ENSCVAG00000003087	nelfe	99	59.366	ENSHGLG00100014073	NELFE	97	59.366	Heterocephalus_glaber_male
ENSCVAG00000003087	nelfe	92	58.430	ENSJJAG00000014005	Nelfe	91	56.901	Jaculus_jaculus
ENSCVAG00000003087	nelfe	99	62.644	ENSLAFG00000028155	NELFE	97	63.307	Loxodonta_africana
ENSCVAG00000003087	nelfe	97	60.294	ENSMFAG00000031089	-	98	58.453	Macaca_fascicularis
ENSCVAG00000003087	nelfe	98	58.721	ENSMMUG00000041521	-	100	57.558	Macaca_mulatta
ENSCVAG00000003087	nelfe	86	52.994	ENSMGAG00000001297	NELFE	69	76.699	Meleagris_gallopavo
ENSCVAG00000003087	nelfe	99	62.772	ENSMAUG00000016812	Nelfe	100	59.008	Mesocricetus_auratus
ENSCVAG00000003087	nelfe	99	65.928	ENSMICG00000003287	NELFE	98	61.880	Microcebus_murinus
ENSCVAG00000003087	nelfe	99	81.897	ENSMMOG00000014544	nelfe	100	76.550	Mola_mola
ENSCVAG00000003087	nelfe	99	60.405	ENSMODG00000015063	NELFE	85	76.552	Monodelphis_domestica
ENSCVAG00000003087	nelfe	99	57.600	ENSMLUG00000028069	-	97	57.867	Myotis_lucifugus
ENSCVAG00000003087	nelfe	99	66.006	ENSNGAG00000016248	Nelfe	100	60.000	Nannospalax_galili
ENSCVAG00000003087	nelfe	100	84.463	ENSNBRG00000018756	nelfe	100	84.463	Neolamprologus_brichardi
ENSCVAG00000003087	nelfe	99	80.747	ENSONIG00000013513	nelfe	100	87.921	Oreochromis_niloticus
ENSCVAG00000003087	nelfe	99	62.032	ENSPPAG00000039942	NELFE	98	64.752	Pan_paniscus
ENSCVAG00000003087	nelfe	99	61.765	ENSPTRG00000017996	NELFE	98	64.491	Pan_troglodytes
ENSCVAG00000003087	nelfe	99	80.747	ENSPKIG00000012048	nelfe	100	80.747	Paramormyrops_kingsleyae
ENSCVAG00000003087	nelfe	100	87.714	ENSPNYG00000017837	nelfe	100	87.714	Pundamilia_nyererei
ENSCVAG00000003087	nelfe	99	58.537	ENSRBIG00000028593	-	98	66.667	Rhinopithecus_bieti
ENSCVAG00000003087	nelfe	93	64.943	ENSSARG00000003684	NELFE	95	62.500	Sorex_araneus
ENSCVAG00000003087	nelfe	99	66.189	ENSSPUG00000012971	NELFE	100	63.934	Sphenodon_punctatus
ENSCVAG00000003087	nelfe	99	58.696	ENSXETG00000010931	nelfe	74	76.351	Xenopus_tropicalis
ENSCVAG00000003087	nelfe	99	87.709	ENSXMAG00000014078	nelfe	99	87.709	Xiphophorus_maculatus