EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003114 (Gene tree)
Gene ID: 107087833
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5176 bases
Position: chrKL652696.1:50003-55178
Accession: 107087833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021211	Exo_endo_phos	PF03372.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012366	-	1456	XM_015379617	ENSCVAP00000021211	359 (aa)	XP_015235103	UPI000742BCC9

Gene Model

Click here to download ENSCVAG00000003114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003114	tdp2b	95	53.143	ENSG00000111802	TDP2	93	53.714	Homo_sapiens
ENSCVAG00000003114	tdp2b	72	65.116	ENSAPOG00000018379	-	91	65.116	Acanthochromis_polyacanthus
ENSCVAG00000003114	tdp2b	70	58.730	ENSAMEG00000010230	TDP2	89	58.730	Ailuropoda_melanoleuca
ENSCVAG00000003114	tdp2b	54	60.309	ENSAOCG00000010081	-	82	60.309	Amphiprion_ocellaris
ENSCVAG00000003114	tdp2b	76	61.905	ENSAPEG00000004208	-	97	61.905	Amphiprion_percula
ENSCVAG00000003114	tdp2b	72	65.116	ENSATEG00000010663	-	84	65.116	Anabas_testudineus
ENSCVAG00000003114	tdp2b	93	54.624	ENSACAG00000002332	TDP2	92	54.108	Anolis_carolinensis
ENSCVAG00000003114	tdp2b	95	54.571	ENSANAG00000020033	TDP2	93	54.571	Aotus_nancymaae
ENSCVAG00000003114	tdp2b	75	70.741	ENSACLG00000016148	tdp2b	96	70.741	Astatotilapia_calliptera
ENSCVAG00000003114	tdp2b	73	72.624	ENSACLG00000016174	tdp2b	95	69.149	Astatotilapia_calliptera
ENSCVAG00000003114	tdp2b	81	67.450	ENSACLG00000016132	tdp2b	95	69.504	Astatotilapia_calliptera
ENSCVAG00000003114	tdp2b	68	53.036	ENSAMXG00000036549	tdp2a	80	53.036	Astyanax_mexicanus
ENSCVAG00000003114	tdp2b	96	64.785	ENSAMXG00000011775	tdp2b	98	64.785	Astyanax_mexicanus
ENSCVAG00000003114	tdp2b	95	53.409	ENSBTAG00000000365	TDP2	93	53.409	Bos_taurus
ENSCVAG00000003114	tdp2b	95	55.263	ENSCJAG00000021963	-	93	54.857	Callithrix_jacchus
ENSCVAG00000003114	tdp2b	95	56.140	ENSCJAG00000006074	TDP2	92	57.295	Callithrix_jacchus
ENSCVAG00000003114	tdp2b	95	53.666	ENSCAFG00000010428	TDP2	98	53.666	Canis_familiaris
ENSCVAG00000003114	tdp2b	70	59.921	ENSCAFG00020009994	TDP2	86	59.921	Canis_lupus_dingo
ENSCVAG00000003114	tdp2b	77	55.435	ENSCHIG00000015294	-	84	59.524	Capra_hircus
ENSCVAG00000003114	tdp2b	86	50.157	ENSTSYG00000037199	TDP2	99	50.470	Carlito_syrichta
ENSCVAG00000003114	tdp2b	95	52.571	ENSCPOG00000006390	TDP2	94	53.143	Cavia_porcellus
ENSCVAG00000003114	tdp2b	95	55.263	ENSCCAG00000022734	TDP2	93	55.263	Cebus_capucinus
ENSCVAG00000003114	tdp2b	95	54.386	ENSCATG00000022076	TDP2	88	56.089	Cercocebus_atys
ENSCVAG00000003114	tdp2b	95	52.571	ENSCLAG00000002072	TDP2	94	52.571	Chinchilla_lanigera
ENSCVAG00000003114	tdp2b	97	53.203	ENSCSAG00000007769	TDP2	95	53.846	Chlorocebus_sabaeus
ENSCVAG00000003114	tdp2b	95	53.276	ENSCPBG00000006551	TDP2	86	53.276	Chrysemys_picta_bellii
ENSCVAG00000003114	tdp2b	95	53.509	ENSCANG00000040122	TDP2	94	53.509	Colobus_angolensis_palliatus
ENSCVAG00000003114	tdp2b	96	48.023	ENSCGRG00001000384	Tdp2	91	48.295	Cricetulus_griseus_chok1gshd
ENSCVAG00000003114	tdp2b	96	46.802	ENSCGRG00000010250	Tdp2	93	47.688	Cricetulus_griseus_crigri
ENSCVAG00000003114	tdp2b	69	52.632	ENSDARG00000069941	tdp2a	55	52.632	Danio_rerio
ENSCVAG00000003114	tdp2b	98	64.191	ENSDARG00000035954	tdp2b	98	63.926	Danio_rerio
ENSCVAG00000003114	tdp2b	95	52.286	ENSDNOG00000044082	TDP2	92	52.924	Dasypus_novemcinctus
ENSCVAG00000003114	tdp2b	69	59.600	ENSETEG00000019096	TDP2	89	59.600	Echinops_telfairi
ENSCVAG00000003114	tdp2b	72	44.402	ENSEBUG00000006535	tdp2a	60	44.402	Eptatretus_burgeri
ENSCVAG00000003114	tdp2b	95	52.571	ENSEASG00005007656	TDP2	93	52.571	Equus_asinus_asinus
ENSCVAG00000003114	tdp2b	95	52.571	ENSECAG00000014264	TDP2	93	52.571	Equus_caballus
ENSCVAG00000003114	tdp2b	95	54.360	ENSEEUG00000010776	TDP2	93	54.360	Erinaceus_europaeus
ENSCVAG00000003114	tdp2b	77	48.014	ENSELUG00000009321	tdp2a	81	47.909	Esox_lucius
ENSCVAG00000003114	tdp2b	96	70.270	ENSELUG00000016449	tdp2b	97	69.459	Esox_lucius
ENSCVAG00000003114	tdp2b	95	53.143	ENSFCAG00000025612	TDP2	93	53.143	Felis_catus
ENSCVAG00000003114	tdp2b	95	50.857	ENSFALG00000004710	TDP2	94	50.857	Ficedula_albicollis
ENSCVAG00000003114	tdp2b	74	56.522	ENSFDAG00000006512	TDP2	94	56.522	Fukomys_damarensis
ENSCVAG00000003114	tdp2b	70	63.241	ENSFHEG00000013560	-	86	63.241	Fundulus_heteroclitus
ENSCVAG00000003114	tdp2b	95	51.714	ENSGALG00000013637	TDP2	91	51.714	Gallus_gallus
ENSCVAG00000003114	tdp2b	95	54.131	ENSGAGG00000002853	TDP2	86	54.131	Gopherus_agassizii
ENSCVAG00000003114	tdp2b	95	54.094	ENSGGOG00000014237	TDP2	92	55.160	Gorilla_gorilla
ENSCVAG00000003114	tdp2b	99	78.611	ENSHBUG00000002714	tdp2b	99	78.611	Haplochromis_burtoni
ENSCVAG00000003114	tdp2b	57	71.564	ENSHBUG00000005421	-	88	71.564	Haplochromis_burtoni
ENSCVAG00000003114	tdp2b	95	54.179	ENSHGLG00000008655	TDP2	94	54.179	Heterocephalus_glaber_female
ENSCVAG00000003114	tdp2b	95	54.179	ENSHGLG00100019087	TDP2	94	54.179	Heterocephalus_glaber_male
ENSCVAG00000003114	tdp2b	99	65.416	ENSIPUG00000013691	tdp2b	99	65.416	Ictalurus_punctatus
ENSCVAG00000003114	tdp2b	96	48.433	ENSJJAG00000021685	Tdp2	97	48.433	Jaculus_jaculus
ENSCVAG00000003114	tdp2b	70	64.567	ENSKMAG00000015485	-	82	64.567	Kryptolebias_marmoratus
ENSCVAG00000003114	tdp2b	94	53.390	ENSLACG00000008852	TDP2	93	53.672	Latimeria_chalumnae
ENSCVAG00000003114	tdp2b	75	66.426	ENSLOCG00000005817	tdp2b	99	66.426	Lepisosteus_oculatus
ENSCVAG00000003114	tdp2b	95	53.409	ENSLAFG00000002567	TDP2	95	52.841	Loxodonta_africana
ENSCVAG00000003114	tdp2b	95	54.386	ENSMFAG00000045296	TDP2	94	54.386	Macaca_fascicularis
ENSCVAG00000003114	tdp2b	95	54.386	ENSMMUG00000009803	TDP2	94	54.386	Macaca_mulatta
ENSCVAG00000003114	tdp2b	95	54.386	ENSMNEG00000038003	TDP2	94	54.386	Macaca_nemestrina
ENSCVAG00000003114	tdp2b	95	54.678	ENSMLEG00000028883	TDP2	94	54.678	Mandrillus_leucophaeus
ENSCVAG00000003114	tdp2b	99	74.860	ENSMAMG00000013654	tdp2b	99	74.860	Mastacembelus_armatus
ENSCVAG00000003114	tdp2b	71	72.441	ENSMZEG00005004055	tdp2b	84	72.441	Maylandia_zebra
ENSCVAG00000003114	tdp2b	76	71.223	ENSMZEG00005004126	tdp2b	95	71.223	Maylandia_zebra
ENSCVAG00000003114	tdp2b	99	78.056	ENSMZEG00005003950	tdp2b	99	78.056	Maylandia_zebra
ENSCVAG00000003114	tdp2b	74	71.642	ENSMZEG00005004077	tdp2b	91	71.642	Maylandia_zebra
ENSCVAG00000003114	tdp2b	73	69.202	ENSMZEG00005004103	tdp2b	88	69.202	Maylandia_zebra
ENSCVAG00000003114	tdp2b	74	70.221	ENSMZEG00005004153	tdp2b	96	70.221	Maylandia_zebra
ENSCVAG00000003114	tdp2b	70	62.308	ENSMZEG00005003980	-	79	64.344	Maylandia_zebra
ENSCVAG00000003114	tdp2b	95	52.000	ENSMGAG00000008014	TDP2	91	52.000	Meleagris_gallopavo
ENSCVAG00000003114	tdp2b	95	47.863	ENSMAUG00000014451	Tdp2	90	48.538	Mesocricetus_auratus
ENSCVAG00000003114	tdp2b	99	51.966	ENSMICG00000000039	TDP2	93	55.596	Microcebus_murinus
ENSCVAG00000003114	tdp2b	95	51.003	ENSMOCG00000002823	Tdp2	90	51.003	Microtus_ochrogaster
ENSCVAG00000003114	tdp2b	85	56.289	ENSMODG00000011653	TDP2	95	56.289	Monodelphis_domestica
ENSCVAG00000003114	tdp2b	70	66.270	ENSMALG00000005368	-	85	66.270	Monopterus_albus
ENSCVAG00000003114	tdp2b	96	49.148	MGP_CAROLIEiJ_G0018354	Tdp2	91	49.148	Mus_caroli
ENSCVAG00000003114	tdp2b	96	48.864	ENSMUSG00000035958	Tdp2	91	48.864	Mus_musculus
ENSCVAG00000003114	tdp2b	96	48.011	MGP_PahariEiJ_G0019417	Tdp2	91	48.011	Mus_pahari
ENSCVAG00000003114	tdp2b	96	48.588	MGP_SPRETEiJ_G0019220	Tdp2	90	48.864	Mus_spretus
ENSCVAG00000003114	tdp2b	95	52.857	ENSMPUG00000004516	TDP2	94	53.509	Mustela_putorius_furo
ENSCVAG00000003114	tdp2b	93	49.275	ENSMLUG00000013506	TDP2	92	49.565	Myotis_lucifugus
ENSCVAG00000003114	tdp2b	93	49.128	ENSNGAG00000001375	Tdp2	93	48.056	Nannospalax_galili
ENSCVAG00000003114	tdp2b	95	53.143	ENSNLEG00000002447	TDP2	95	53.714	Nomascus_leucogenys
ENSCVAG00000003114	tdp2b	95	52.857	ENSOPRG00000016299	TDP2	96	52.857	Ochotona_princeps
ENSCVAG00000003114	tdp2b	74	56.159	ENSODEG00000014018	TDP2	93	56.159	Octodon_degus
ENSCVAG00000003114	tdp2b	95	54.000	ENSOCUG00000013773	TDP2	93	54.000	Oryctolagus_cuniculus
ENSCVAG00000003114	tdp2b	71	60.700	ENSORLG00000001661	-	94	60.700	Oryzias_latipes
ENSCVAG00000003114	tdp2b	71	60.700	ENSORLG00020004634	-	94	60.700	Oryzias_latipes_hni
ENSCVAG00000003114	tdp2b	73	50.562	ENSORLG00015008190	-	97	50.562	Oryzias_latipes_hsok
ENSCVAG00000003114	tdp2b	71	59.144	ENSOMEG00000015899	-	93	58.730	Oryzias_melastigma
ENSCVAG00000003114	tdp2b	97	52.909	ENSOGAG00000025303	TDP2	93	52.909	Otolemur_garnettii
ENSCVAG00000003114	tdp2b	95	53.143	ENSPPAG00000029023	TDP2	92	55.160	Pan_paniscus
ENSCVAG00000003114	tdp2b	95	52.857	ENSPPRG00000015398	TDP2	93	52.857	Panthera_pardus
ENSCVAG00000003114	tdp2b	70	57.937	ENSPTIG00000018574	TDP2	86	57.937	Panthera_tigris_altaica
ENSCVAG00000003114	tdp2b	95	53.143	ENSPTRG00000017778	TDP2	92	55.160	Pan_troglodytes
ENSCVAG00000003114	tdp2b	95	54.545	ENSPANG00000017590	TDP2	94	54.386	Papio_anubis
ENSCVAG00000003114	tdp2b	97	66.116	ENSPKIG00000006483	tdp2b	97	65.374	Paramormyrops_kingsleyae
ENSCVAG00000003114	tdp2b	74	57.621	ENSPSIG00000004948	TDP2	92	57.621	Pelodiscus_sinensis
ENSCVAG00000003114	tdp2b	96	48.870	ENSPEMG00000001788	Tdp2	91	48.870	Peromyscus_maniculatus_bairdii
ENSCVAG00000003114	tdp2b	71	43.173	ENSPMAG00000001570	tdp2b	99	43.542	Petromyzon_marinus
ENSCVAG00000003114	tdp2b	95	54.986	ENSPCIG00000007316	TDP2	93	53.784	Phascolarctos_cinereus
ENSCVAG00000003114	tdp2b	72	60.618	ENSPFOG00000017990	-	93	60.618	Poecilia_formosa
ENSCVAG00000003114	tdp2b	71	60.311	ENSPLAG00000019439	-	81	60.311	Poecilia_latipinna
ENSCVAG00000003114	tdp2b	76	57.971	ENSPMEG00000010824	-	93	57.971	Poecilia_mexicana
ENSCVAG00000003114	tdp2b	95	52.857	ENSPPYG00000016282	TDP2	86	53.429	Pongo_abelii
ENSCVAG00000003114	tdp2b	95	53.666	ENSPCOG00000021415	TDP2	96	55.072	Propithecus_coquereli
ENSCVAG00000003114	tdp2b	74	67.014	ENSPNYG00000011504	tdp2b	94	67.014	Pundamilia_nyererei
ENSCVAG00000003114	tdp2b	55	59.296	ENSPNYG00000001944	-	78	60.000	Pundamilia_nyererei
ENSCVAG00000003114	tdp2b	99	76.111	ENSPNYG00000011532	tdp2b	99	76.111	Pundamilia_nyererei
ENSCVAG00000003114	tdp2b	69	57.200	ENSPNAG00000022162	tdp2a	63	57.200	Pygocentrus_nattereri
ENSCVAG00000003114	tdp2b	92	49.706	ENSRNOG00000018246	Tdp2	89	49.706	Rattus_norvegicus
ENSCVAG00000003114	tdp2b	95	52.571	ENSRBIG00000037119	TDP2	94	53.509	Rhinopithecus_bieti
ENSCVAG00000003114	tdp2b	95	53.216	ENSRROG00000005025	TDP2	89	54.982	Rhinopithecus_roxellana
ENSCVAG00000003114	tdp2b	95	54.971	ENSSBOG00000028734	TDP2	88	56.827	Saimiri_boliviensis_boliviensis
ENSCVAG00000003114	tdp2b	95	53.824	ENSSHAG00000002506	TDP2	91	54.391	Sarcophilus_harrisii
ENSCVAG00000003114	tdp2b	70	54.724	ENSSFOG00015011322	-	71	54.724	Scleropages_formosus
ENSCVAG00000003114	tdp2b	73	56.489	ENSSARG00000013547	TDP2	93	56.489	Sorex_araneus
ENSCVAG00000003114	tdp2b	95	50.571	ENSSPUG00000008288	TDP2	94	49.857	Sphenodon_punctatus
ENSCVAG00000003114	tdp2b	95	53.143	ENSSSCG00000001092	TDP2	93	53.143	Sus_scrofa
ENSCVAG00000003114	tdp2b	71	56.471	ENSTGUG00000009035	TDP2	97	56.471	Taeniopygia_guttata
ENSCVAG00000003114	tdp2b	73	59.410	ENSTRUG00000012218	-	94	59.410	Takifugu_rubripes
ENSCVAG00000003114	tdp2b	100	75.069	ENSTRUG00000014347	tdp2b	100	75.069	Takifugu_rubripes
ENSCVAG00000003114	tdp2b	100	76.177	ENSTNIG00000017792	tdp2b	99	76.177	Tetraodon_nigroviridis
ENSCVAG00000003114	tdp2b	70	62.353	ENSTNIG00000010260	TDP2	97	62.353	Tetraodon_nigroviridis
ENSCVAG00000003114	tdp2b	95	53.429	ENSTTRG00000016376	TDP2	93	54.286	Tursiops_truncatus
ENSCVAG00000003114	tdp2b	96	51.744	ENSUAMG00000025939	TDP2	94	51.594	Ursus_americanus
ENSCVAG00000003114	tdp2b	70	59.127	ENSUMAG00000020111	TDP2	83	59.127	Ursus_maritimus
ENSCVAG00000003114	tdp2b	96	56.338	ENSXETG00000014826	tdp2	94	56.620	Xenopus_tropicalis
ENSCVAG00000003114	tdp2b	69	62.550	ENSXCOG00000010778	-	70	62.550	Xiphophorus_couchianus
ENSCVAG00000003114	tdp2b	70	62.698	ENSXMAG00000022252	-	73	62.698	Xiphophorus_maculatus