EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003135 (Gene tree)
Gene ID: 107091124
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: coiled-coil domain-containing protein 86-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3877 bases
Position: chrKL652826.1:535109-538985
Accession: 107091124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021229	Cgr1	PF03879.14	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012330	-	1501	XM_015384877	ENSCVAP00000021229	294 (aa)	XP_015240363	UPI000742A02B

Gene Model

Click here to download ENSCVAG00000003135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003135's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003135	si:ch211-217k17.7	68	50.242	ENSG00000110104	CCDC86	90	64.894	Homo_sapiens
ENSCVAG00000003135	si:ch211-217k17.7	100	65.217	ENSAPOG00000010968	si:ch211-217k17.7	100	64.883	Acanthochromis_polyacanthus
ENSCVAG00000003135	si:ch211-217k17.7	63	51.531	ENSAMEG00000007330	CCDC86	53	51.531	Ailuropoda_melanoleuca
ENSCVAG00000003135	si:ch211-217k17.7	100	61.184	ENSACIG00000020679	si:ch211-217k17.7	88	61.184	Amphilophus_citrinellus
ENSCVAG00000003135	si:ch211-217k17.7	100	65.116	ENSAOCG00000006303	si:ch211-217k17.7	100	65.116	Amphiprion_ocellaris
ENSCVAG00000003135	si:ch211-217k17.7	100	65.116	ENSAPEG00000015364	si:ch211-217k17.7	100	65.116	Amphiprion_percula
ENSCVAG00000003135	si:ch211-217k17.7	100	60.201	ENSATEG00000016386	si:ch211-217k17.7	100	59.532	Anabas_testudineus
ENSCVAG00000003135	si:ch211-217k17.7	63	53.403	ENSANAG00000029335	CCDC86	53	53.403	Aotus_nancymaae
ENSCVAG00000003135	si:ch211-217k17.7	66	50.746	ENSCHIG00000014465	CCDC86	56	50.746	Capra_hircus
ENSCVAG00000003135	si:ch211-217k17.7	67	49.261	ENSCPOG00000027361	CCDC86	57	49.261	Cavia_porcellus
ENSCVAG00000003135	si:ch211-217k17.7	63	52.356	ENSCSAG00000006236	CCDC86	53	52.356	Chlorocebus_sabaeus
ENSCVAG00000003135	si:ch211-217k17.7	98	58.249	ENSCSEG00000002637	si:ch211-217k17.7	97	57.576	Cynoglossus_semilaevis
ENSCVAG00000003135	si:ch211-217k17.7	88	51.145	ENSDARG00000059908	si:ch211-217k17.7	87	50.186	Danio_rerio
ENSCVAG00000003135	si:ch211-217k17.7	85	51.625	ENSELUG00000022687	si:ch211-217k17.7	84	51.625	Esox_lucius
ENSCVAG00000003135	si:ch211-217k17.7	86	50.769	ENSGMOG00000016242	-	85	50.584	Gadus_morhua
ENSCVAG00000003135	si:ch211-217k17.7	100	73.898	ENSGAFG00000005681	si:ch211-217k17.7	100	73.898	Gambusia_affinis
ENSCVAG00000003135	si:ch211-217k17.7	84	57.831	ENSGACG00000017630	si:ch211-217k17.7	99	57.831	Gasterosteus_aculeatus
ENSCVAG00000003135	si:ch211-217k17.7	68	50.242	ENSGGOG00000013670	CCDC86	57	50.242	Gorilla_gorilla
ENSCVAG00000003135	si:ch211-217k17.7	94	59.859	ENSHBUG00000010352	si:ch211-217k17.7	100	60.000	Haplochromis_burtoni
ENSCVAG00000003135	si:ch211-217k17.7	57	50.289	ENSHGLG00100010685	CCDC86	80	47.692	Heterocephalus_glaber_male
ENSCVAG00000003135	si:ch211-217k17.7	100	65.116	ENSKMAG00000000919	si:ch211-217k17.7	99	64.430	Kryptolebias_marmoratus
ENSCVAG00000003135	si:ch211-217k17.7	95	57.193	ENSLBEG00000020547	-	92	56.140	Labrus_bergylta
ENSCVAG00000003135	si:ch211-217k17.7	65	48.529	ENSLAFG00000009449	CCDC86	57	48.529	Loxodonta_africana
ENSCVAG00000003135	si:ch211-217k17.7	66	50.746	ENSMLEG00000035102	-	55	50.746	Mandrillus_leucophaeus
ENSCVAG00000003135	si:ch211-217k17.7	99	60.000	ENSMAMG00000016395	si:ch211-217k17.7	99	59.333	Mastacembelus_armatus
ENSCVAG00000003135	si:ch211-217k17.7	100	59.150	ENSMZEG00005019822	si:ch211-217k17.7	100	60.000	Maylandia_zebra
ENSCVAG00000003135	si:ch211-217k17.7	68	49.528	ENSMOCG00000009306	Ccdc86	60	49.528	Microtus_ochrogaster
ENSCVAG00000003135	si:ch211-217k17.7	100	58.528	ENSMMOG00000006446	si:ch211-217k17.7	100	58.863	Mola_mola
ENSCVAG00000003135	si:ch211-217k17.7	67	49.282	MGP_CAROLIEiJ_G0022707	-	59	49.282	Mus_caroli
ENSCVAG00000003135	si:ch211-217k17.7	59	69.364	ENSNBRG00000013330	-	82	83.673	Neolamprologus_brichardi
ENSCVAG00000003135	si:ch211-217k17.7	100	60.265	ENSONIG00000017568	si:ch211-217k17.7	100	60.265	Oreochromis_niloticus
ENSCVAG00000003135	si:ch211-217k17.7	92	58.511	ENSORLG00000006331	-	96	58.511	Oryzias_latipes
ENSCVAG00000003135	si:ch211-217k17.7	92	57.554	ENSORLG00020021345	si:ch211-217k17.7	96	58.273	Oryzias_latipes_hni
ENSCVAG00000003135	si:ch211-217k17.7	92	58.781	ENSORLG00015021538	si:ch211-217k17.7	96	58.781	Oryzias_latipes_hsok
ENSCVAG00000003135	si:ch211-217k17.7	85	54.545	ENSOMEG00000007064	si:ch211-217k17.7	91	54.167	Oryzias_melastigma
ENSCVAG00000003135	si:ch211-217k17.7	68	50.242	ENSPPAG00000042424	CCDC86	57	50.242	Pan_paniscus
ENSCVAG00000003135	si:ch211-217k17.7	68	50.242	ENSPTRG00000003721	CCDC86	57	50.242	Pan_troglodytes
ENSCVAG00000003135	si:ch211-217k17.7	86	48.855	ENSPKIG00000016503	si:ch211-217k17.7	84	48.855	Paramormyrops_kingsleyae
ENSCVAG00000003135	si:ch211-217k17.7	77	58.079	ENSPMGG00000023665	si:ch211-217k17.7	90	57.692	Periophthalmus_magnuspinnatus
ENSCVAG00000003135	si:ch211-217k17.7	98	73.038	ENSPFOG00000011617	si:ch211-217k17.7	99	73.038	Poecilia_formosa
ENSCVAG00000003135	si:ch211-217k17.7	98	72.696	ENSPLAG00000016122	si:ch211-217k17.7	99	72.696	Poecilia_latipinna
ENSCVAG00000003135	si:ch211-217k17.7	100	73.000	ENSPMEG00000018535	si:ch211-217k17.7	100	73.000	Poecilia_mexicana
ENSCVAG00000003135	si:ch211-217k17.7	100	71.667	ENSPREG00000005478	si:ch211-217k17.7	100	71.667	Poecilia_reticulata
ENSCVAG00000003135	si:ch211-217k17.7	68	50.242	ENSPPYG00000003205	CCDC86	57	50.242	Pongo_abelii
ENSCVAG00000003135	si:ch211-217k17.7	71	48.858	ENSRNOG00000020925	Ccdc86	63	48.858	Rattus_norvegicus
ENSCVAG00000003135	si:ch211-217k17.7	87	63.035	ENSSMAG00000007686	si:ch211-217k17.7	88	63.469	Scophthalmus_maximus
ENSCVAG00000003135	si:ch211-217k17.7	82	58.750	ENSSDUG00000002689	si:ch211-217k17.7	84	60.816	Seriola_dumerili
ENSCVAG00000003135	si:ch211-217k17.7	90	60.526	ENSSLDG00000016681	si:ch211-217k17.7	99	58.824	Seriola_lalandi_dorsalis
ENSCVAG00000003135	si:ch211-217k17.7	100	64.548	ENSSPAG00000000367	si:ch211-217k17.7	100	64.548	Stegastes_partitus
ENSCVAG00000003135	si:ch211-217k17.7	68	61.307	ENSTRUG00000024101	si:ch211-217k17.7	92	55.556	Takifugu_rubripes
ENSCVAG00000003135	si:ch211-217k17.7	100	72.881	ENSXCOG00000011207	si:ch211-217k17.7	100	72.881	Xiphophorus_couchianus
ENSCVAG00000003135	si:ch211-217k17.7	100	72.542	ENSXMAG00000005529	si:ch211-217k17.7	100	72.542	Xiphophorus_maculatus