EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000003180 (Gene tree)
Gene ID: 107086165
Gene Symbol: utp23
Alias: fc04b12|wu:fc04b12|zgc:110214
Full Name: UTP23%2C small subunit processome component
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5452 bases
Position: chrKL652644.1:220989-226440
Accession: 107086165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021260	Fcf1	PF04900.12	4.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012259	-	2200	XM_015376948	ENSCVAP00000021260	257 (aa)	XP_015232434	UPI00074294E6

Gene Model

Click here to download ENSCVAG00000003180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003180	utp23	87	59.375	ENSG00000147679	UTP23	96	65.152	Homo_sapiens
ENSCVAG00000003180	utp23	53	31.655	ENSAPOG00000010473	fcf1	68	31.884	Acanthochromis_polyacanthus
ENSCVAG00000003180	utp23	60	76.282	ENSAPOG00000004608	-	78	75.301	Acanthochromis_polyacanthus
ENSCVAG00000003180	utp23	61	76.433	ENSAPOG00000013233	UTP23	71	75.449	Acanthochromis_polyacanthus
ENSCVAG00000003180	utp23	85	80.365	ENSAPOG00000004620	utp23	91	79.476	Acanthochromis_polyacanthus
ENSCVAG00000003180	utp23	87	60.268	ENSAMEG00000010317	UTP23	90	60.268	Ailuropoda_melanoleuca
ENSCVAG00000003180	utp23	99	82.946	ENSACIG00000013638	utp23	97	82.946	Amphilophus_citrinellus
ENSCVAG00000003180	utp23	53	30.935	ENSAOCG00000003752	fcf1	68	31.159	Amphiprion_ocellaris
ENSCVAG00000003180	utp23	96	78.226	ENSAOCG00000016307	utp23	98	78.226	Amphiprion_ocellaris
ENSCVAG00000003180	utp23	96	78.400	ENSAPEG00000018976	utp23	99	78.400	Amphiprion_percula
ENSCVAG00000003180	utp23	53	30.935	ENSAPEG00000011644	fcf1	74	31.159	Amphiprion_percula
ENSCVAG00000003180	utp23	98	88.189	ENSATEG00000007509	utp23	100	88.189	Anabas_testudineus
ENSCVAG00000003180	utp23	81	63.158	ENSACAG00000011061	UTP23	89	62.555	Anolis_carolinensis
ENSCVAG00000003180	utp23	87	59.375	ENSANAG00000025273	-	90	59.375	Aotus_nancymaae
ENSCVAG00000003180	utp23	87	58.482	ENSANAG00000036252	-	87	58.482	Aotus_nancymaae
ENSCVAG00000003180	utp23	99	68.235	ENSAMXG00000020989	utp23	89	70.614	Astyanax_mexicanus
ENSCVAG00000003180	utp23	87	59.821	ENSBTAG00000040422	UTP23	90	59.821	Bos_taurus
ENSCVAG00000003180	utp23	84	41.475	WBGene00016411	C34E10.10	86	41.784	Caenorhabditis_elegans
ENSCVAG00000003180	utp23	87	58.929	ENSCJAG00000005903	UTP23	90	58.929	Callithrix_jacchus
ENSCVAG00000003180	utp23	87	61.161	ENSCAFG00000000821	UTP23	90	61.161	Canis_familiaris
ENSCVAG00000003180	utp23	87	61.161	ENSCAFG00020004174	UTP23	90	61.161	Canis_lupus_dingo
ENSCVAG00000003180	utp23	87	59.821	ENSCHIG00000019828	UTP23	90	59.821	Capra_hircus
ENSCVAG00000003180	utp23	85	61.009	ENSTSYG00000001644	UTP23	88	61.009	Carlito_syrichta
ENSCVAG00000003180	utp23	84	60.465	ENSCPOG00000034561	UTP23	79	60.465	Cavia_porcellus
ENSCVAG00000003180	utp23	81	60.766	ENSCCAG00000030228	UTP23	90	59.821	Cebus_capucinus
ENSCVAG00000003180	utp23	87	58.929	ENSCATG00000035129	UTP23	90	58.929	Cercocebus_atys
ENSCVAG00000003180	utp23	90	52.381	ENSCLAG00000000531	-	98	53.125	Chinchilla_lanigera
ENSCVAG00000003180	utp23	87	59.375	ENSCLAG00000005108	-	90	59.375	Chinchilla_lanigera
ENSCVAG00000003180	utp23	87	59.375	ENSCSAG00000010933	UTP23	90	59.375	Chlorocebus_sabaeus
ENSCVAG00000003180	utp23	85	62.385	ENSCHOG00000003145	UTP23	87	62.385	Choloepus_hoffmanni
ENSCVAG00000003180	utp23	86	66.364	ENSCPBG00000001634	UTP23	88	64.091	Chrysemys_picta_bellii
ENSCVAG00000003180	utp23	54	32.857	ENSCING00000018434	-	62	34.375	Ciona_intestinalis
ENSCVAG00000003180	utp23	81	49.528	ENSCING00000012577	-	96	47.196	Ciona_intestinalis
ENSCVAG00000003180	utp23	54	32.857	ENSCSAVG00000004997	-	72	32.857	Ciona_savignyi
ENSCVAG00000003180	utp23	81	50.476	ENSCSAVG00000003273	-	96	49.296	Ciona_savignyi
ENSCVAG00000003180	utp23	87	59.375	ENSCANG00000028461	UTP23	83	59.375	Colobus_angolensis_palliatus
ENSCVAG00000003180	utp23	81	59.809	ENSCGRG00001005218	Utp23	86	60.465	Cricetulus_griseus_chok1gshd
ENSCVAG00000003180	utp23	86	85.455	ENSCSEG00000011409	utp23	88	83.700	Cynoglossus_semilaevis
ENSCVAG00000003180	utp23	94	74.793	ENSDARG00000105012	utp23	94	75.309	Danio_rerio
ENSCVAG00000003180	utp23	54	34.043	ENSDARG00000102333	fcf1	69	34.043	Danio_rerio
ENSCVAG00000003180	utp23	90	60.776	ENSDNOG00000033602	UTP23	92	60.776	Dasypus_novemcinctus
ENSCVAG00000003180	utp23	81	53.110	ENSDORG00000029054	-	79	54.206	Dipodomys_ordii
ENSCVAG00000003180	utp23	81	48.325	FBgn0031361	CG17652	85	48.598	Drosophila_melanogaster
ENSCVAG00000003180	utp23	92	40.928	ENSETEG00000017109	-	88	42.793	Echinops_telfairi
ENSCVAG00000003180	utp23	91	58.298	ENSETEG00000015401	-	87	59.633	Echinops_telfairi
ENSCVAG00000003180	utp23	83	53.271	ENSEBUG00000009876	utp23	93	52.778	Eptatretus_burgeri
ENSCVAG00000003180	utp23	54	30.282	ENSEBUG00000010373	fcf1	61	32.031	Eptatretus_burgeri
ENSCVAG00000003180	utp23	87	61.607	ENSEASG00005023141	UTP23	90	61.607	Equus_asinus_asinus
ENSCVAG00000003180	utp23	87	62.054	ENSECAG00000026844	UTP23	90	62.054	Equus_caballus
ENSCVAG00000003180	utp23	87	59.375	ENSEEUG00000004503	UTP23	90	59.375	Erinaceus_europaeus
ENSCVAG00000003180	utp23	98	77.559	ENSELUG00000005602	utp23	99	77.559	Esox_lucius
ENSCVAG00000003180	utp23	87	61.161	ENSFCAG00000036051	UTP23	90	61.161	Felis_catus
ENSCVAG00000003180	utp23	81	61.722	ENSFALG00000002299	UTP23	90	59.031	Ficedula_albicollis
ENSCVAG00000003180	utp23	87	60.268	ENSFDAG00000021034	UTP23	87	61.468	Fukomys_damarensis
ENSCVAG00000003180	utp23	98	87.795	ENSFHEG00000008581	utp23	100	87.008	Fundulus_heteroclitus
ENSCVAG00000003180	utp23	92	74.262	ENSGMOG00000015495	utp23	91	77.880	Gadus_morhua
ENSCVAG00000003180	utp23	85	63.303	ENSGALG00000032400	UTP23	88	61.009	Gallus_gallus
ENSCVAG00000003180	utp23	95	88.306	ENSGAFG00000002063	utp23	95	88.710	Gambusia_affinis
ENSCVAG00000003180	utp23	97	76.400	ENSGACG00000002979	utp23	100	76.400	Gasterosteus_aculeatus
ENSCVAG00000003180	utp23	87	59.821	ENSGGOG00000013203	UTP23	90	59.821	Gorilla_gorilla
ENSCVAG00000003180	utp23	98	85.827	ENSHBUG00000023376	utp23	100	85.827	Haplochromis_burtoni
ENSCVAG00000003180	utp23	85	60.550	ENSHGLG00000004025	UTP23	87	60.550	Heterocephalus_glaber_female
ENSCVAG00000003180	utp23	85	58.257	ENSHGLG00000020901	-	81	58.257	Heterocephalus_glaber_female
ENSCVAG00000003180	utp23	81	53.140	ENSHGLG00000008717	-	84	53.140	Heterocephalus_glaber_female
ENSCVAG00000003180	utp23	85	60.550	ENSHGLG00100018875	UTP23	87	60.550	Heterocephalus_glaber_male
ENSCVAG00000003180	utp23	80	52.683	ENSHGLG00100012817	-	95	54.206	Heterocephalus_glaber_male
ENSCVAG00000003180	utp23	96	75.100	ENSHCOG00000007006	utp23	100	77.510	Hippocampus_comes
ENSCVAG00000003180	utp23	99	71.260	ENSIPUG00000014437	utp23	99	71.373	Ictalurus_punctatus
ENSCVAG00000003180	utp23	81	60.287	ENSSTOG00000001411	UTP23	88	60.550	Ictidomys_tridecemlineatus
ENSCVAG00000003180	utp23	88	87.719	ENSKMAG00000002262	utp23	100	84.375	Kryptolebias_marmoratus
ENSCVAG00000003180	utp23	98	80.000	ENSLBEG00000012819	utp23	100	80.000	Labrus_bergylta
ENSCVAG00000003180	utp23	53	30.935	ENSLBEG00000000146	fcf1	68	31.159	Labrus_bergylta
ENSCVAG00000003180	utp23	90	67.672	ENSLACG00000014611	UTP23	87	69.683	Latimeria_chalumnae
ENSCVAG00000003180	utp23	93	69.038	ENSLOCG00000003289	utp23	88	70.089	Lepisosteus_oculatus
ENSCVAG00000003180	utp23	94	56.846	ENSLAFG00000001282	UTP23	87	60.550	Loxodonta_africana
ENSCVAG00000003180	utp23	87	59.375	ENSMFAG00000003374	UTP23	90	59.375	Macaca_fascicularis
ENSCVAG00000003180	utp23	87	59.375	ENSMMUG00000020284	UTP23	90	59.375	Macaca_mulatta
ENSCVAG00000003180	utp23	87	59.375	ENSMNEG00000028668	UTP23	90	59.375	Macaca_nemestrina
ENSCVAG00000003180	utp23	87	59.375	ENSMLEG00000032668	UTP23	84	59.375	Mandrillus_leucophaeus
ENSCVAG00000003180	utp23	98	87.402	ENSMAMG00000003259	utp23	100	87.402	Mastacembelus_armatus
ENSCVAG00000003180	utp23	98	85.433	ENSMZEG00005026398	utp23	100	85.433	Maylandia_zebra
ENSCVAG00000003180	utp23	85	63.761	ENSMGAG00000012472	UTP23	88	61.468	Meleagris_gallopavo
ENSCVAG00000003180	utp23	87	61.607	ENSMICG00000034720	UTP23	90	61.607	Microcebus_murinus
ENSCVAG00000003180	utp23	88	85.526	ENSMMOG00000014498	utp23	100	82.677	Mola_mola
ENSCVAG00000003180	utp23	88	58.222	ENSMODG00000004140	UTP23	88	58.222	Monodelphis_domestica
ENSCVAG00000003180	utp23	96	88.710	ENSMALG00000010867	utp23	98	88.710	Monopterus_albus
ENSCVAG00000003180	utp23	87	57.143	MGP_CAROLIEiJ_G0019781	Utp23	90	57.143	Mus_caroli
ENSCVAG00000003180	utp23	87	58.036	ENSMUSG00000022313	Utp23	90	58.036	Mus_musculus
ENSCVAG00000003180	utp23	87	57.589	MGP_SPRETEiJ_G0020678	Utp23	87	57.589	Mus_spretus
ENSCVAG00000003180	utp23	84	61.574	ENSMPUG00000000987	UTP23	87	61.574	Mustela_putorius_furo
ENSCVAG00000003180	utp23	85	61.009	ENSMLUG00000004345	UTP23	88	61.009	Myotis_lucifugus
ENSCVAG00000003180	utp23	98	85.827	ENSNBRG00000012946	utp23	100	85.827	Neolamprologus_brichardi
ENSCVAG00000003180	utp23	87	58.482	ENSNLEG00000032995	UTP23	83	58.482	Nomascus_leucogenys
ENSCVAG00000003180	utp23	86	58.636	ENSMEUG00000001566	UTP23	94	58.636	Notamacropus_eugenii
ENSCVAG00000003180	utp23	84	60.185	ENSOPRG00000011227	UTP23	86	60.185	Ochotona_princeps
ENSCVAG00000003180	utp23	94	57.676	ENSODEG00000018881	-	91	58.772	Octodon_degus
ENSCVAG00000003180	utp23	77	83.500	ENSONIG00000013525	utp23	99	83.500	Oreochromis_niloticus
ENSCVAG00000003180	utp23	88	47.345	ENSOANG00000004878	UTP23	83	50.000	Ornithorhynchus_anatinus
ENSCVAG00000003180	utp23	83	61.682	ENSOCUG00000007541	UTP23	86	61.682	Oryctolagus_cuniculus
ENSCVAG00000003180	utp23	99	83.594	ENSORLG00000001784	utp23	100	83.594	Oryzias_latipes
ENSCVAG00000003180	utp23	99	83.203	ENSORLG00020009731	utp23	100	83.203	Oryzias_latipes_hni
ENSCVAG00000003180	utp23	99	83.203	ENSORLG00015016970	utp23	100	83.203	Oryzias_latipes_hsok
ENSCVAG00000003180	utp23	98	82.213	ENSOMEG00000008767	utp23	99	83.399	Oryzias_melastigma
ENSCVAG00000003180	utp23	51	53.030	ENSOGAG00000033060	-	87	51.587	Otolemur_garnettii
ENSCVAG00000003180	utp23	88	60.352	ENSOGAG00000017024	UTP23	90	60.352	Otolemur_garnettii
ENSCVAG00000003180	utp23	87	59.821	ENSOARG00000010483	UTP23	90	59.821	Ovis_aries
ENSCVAG00000003180	utp23	87	59.821	ENSPPAG00000028660	UTP23	90	59.821	Pan_paniscus
ENSCVAG00000003180	utp23	87	61.161	ENSPPRG00000024902	UTP23	90	61.161	Panthera_pardus
ENSCVAG00000003180	utp23	87	61.161	ENSPTIG00000019925	UTP23	90	61.161	Panthera_tigris_altaica
ENSCVAG00000003180	utp23	87	59.375	ENSPTRG00000020521	UTP23	83	59.375	Pan_troglodytes
ENSCVAG00000003180	utp23	87	59.375	ENSPANG00000011559	UTP23	90	59.375	Papio_anubis
ENSCVAG00000003180	utp23	92	76.371	ENSPKIG00000018790	utp23	95	78.222	Paramormyrops_kingsleyae
ENSCVAG00000003180	utp23	87	63.677	ENSPSIG00000013132	UTP23	89	61.883	Pelodiscus_sinensis
ENSCVAG00000003180	utp23	88	77.974	ENSPMGG00000019770	utp23	90	77.093	Periophthalmus_magnuspinnatus
ENSCVAG00000003180	utp23	86	57.727	ENSPCIG00000018598	UTP23	85	57.727	Phascolarctos_cinereus
ENSCVAG00000003180	utp23	98	88.189	ENSPFOG00000003590	utp23	100	88.189	Poecilia_formosa
ENSCVAG00000003180	utp23	98	88.583	ENSPLAG00000017925	utp23	100	88.583	Poecilia_latipinna
ENSCVAG00000003180	utp23	98	88.583	ENSPMEG00000006728	utp23	100	88.583	Poecilia_mexicana
ENSCVAG00000003180	utp23	98	87.843	ENSPREG00000002478	utp23	100	87.843	Poecilia_reticulata
ENSCVAG00000003180	utp23	87	59.821	ENSPPYG00000018831	UTP23	90	59.821	Pongo_abelii
ENSCVAG00000003180	utp23	81	59.809	ENSPCAG00000009093	UTP23	88	59.729	Procavia_capensis
ENSCVAG00000003180	utp23	87	61.161	ENSPVAG00000002661	UTP23	87	62.385	Pteropus_vampyrus
ENSCVAG00000003180	utp23	98	84.646	ENSPNYG00000017636	utp23	100	84.646	Pundamilia_nyererei
ENSCVAG00000003180	utp23	83	71.362	ENSPNAG00000024538	utp23	93	72.444	Pygocentrus_nattereri
ENSCVAG00000003180	utp23	87	57.589	ENSRNOG00000004387	Utp23	90	57.589	Rattus_norvegicus
ENSCVAG00000003180	utp23	87	59.375	ENSRBIG00000026267	UTP23	90	59.375	Rhinopithecus_bieti
ENSCVAG00000003180	utp23	87	59.375	ENSRROG00000028593	UTP23	90	59.375	Rhinopithecus_roxellana
ENSCVAG00000003180	utp23	86	31.416	YOR004W	-	87	31.416	Saccharomyces_cerevisiae
ENSCVAG00000003180	utp23	81	60.766	ENSSBOG00000018914	UTP23	90	59.821	Saimiri_boliviensis_boliviensis
ENSCVAG00000003180	utp23	62	53.459	ENSSHAG00000015399	UTP23	81	53.459	Sarcophilus_harrisii
ENSCVAG00000003180	utp23	88	75.221	ENSSFOG00015009226	utp23	99	75.221	Scleropages_formosus
ENSCVAG00000003180	utp23	53	30.216	ENSSMAG00000005119	fcf1	69	30.435	Scophthalmus_maximus
ENSCVAG00000003180	utp23	98	81.250	ENSSMAG00000020390	utp23	100	81.250	Scophthalmus_maximus
ENSCVAG00000003180	utp23	93	87.083	ENSSDUG00000020272	utp23	95	88.158	Seriola_dumerili
ENSCVAG00000003180	utp23	92	87.395	ENSSLDG00000000393	utp23	95	87.719	Seriola_lalandi_dorsalis
ENSCVAG00000003180	utp23	85	66.667	ENSSPUG00000011572	UTP23	88	64.840	Sphenodon_punctatus
ENSCVAG00000003180	utp23	95	79.268	ENSSPAG00000013890	utp23	99	79.268	Stegastes_partitus
ENSCVAG00000003180	utp23	87	60.268	ENSSSCG00000030493	UTP23	89	60.268	Sus_scrofa
ENSCVAG00000003180	utp23	81	61.722	ENSTGUG00000012316	-	90	59.031	Taeniopygia_guttata
ENSCVAG00000003180	utp23	81	60.766	ENSTGUG00000015403	-	96	58.150	Taeniopygia_guttata
ENSCVAG00000003180	utp23	92	76.250	ENSTRUG00000023365	utp23	89	76.754	Takifugu_rubripes
ENSCVAG00000003180	utp23	80	60.000	ENSTBEG00000008655	UTP23	87	59.633	Tupaia_belangeri
ENSCVAG00000003180	utp23	87	60.268	ENSTTRG00000015295	UTP23	90	60.268	Tursiops_truncatus
ENSCVAG00000003180	utp23	87	59.821	ENSUMAG00000020439	UTP23	90	59.821	Ursus_maritimus
ENSCVAG00000003180	utp23	87	58.482	ENSVPAG00000009358	UTP23	90	58.482	Vicugna_pacos
ENSCVAG00000003180	utp23	87	61.161	ENSVVUG00000015307	UTP23	90	61.161	Vulpes_vulpes
ENSCVAG00000003180	utp23	81	60.287	ENSXETG00000020781	utp23	87	63.256	Xenopus_tropicalis
ENSCVAG00000003180	utp23	98	87.843	ENSXCOG00000019504	utp23	100	87.843	Xiphophorus_couchianus
ENSCVAG00000003180	utp23	98	87.843	ENSXMAG00000014058	utp23	100	87.843	Xiphophorus_maculatus