EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003195 (Gene tree)
Gene ID: 107087194
Gene Symbol: -
Alias: -
Full Name: MKL/myocardin-like protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 57373 bases
Position: chrKL652675.1:979328-1036700
Accession: 107087194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021259	SAP	PF02037.27	3.6e-09	1	1
ENSCVAP00000002130	SAP	PF02037.27	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012245	-	6230	XM_015378620	ENSCVAP00000002130	1103 (aa)	XP_015234106	UPI0007429E62
ENSCVAT00000012261	-	6138	-	ENSCVAP00000021259	1080 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000003195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003195	-	56	39.269	ENSCVAG00000002168	mrtfab	99	34.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003195	-	79	39.206	ENSG00000196588	MRTFA	90	69.697	Homo_sapiens
ENSCVAG00000003195	-	59	39.031	ENSAPOG00000014773	mrtfab	90	34.860	Acanthochromis_polyacanthus
ENSCVAG00000003195	-	53	32.480	ENSAMEG00000002819	MYOCD	56	33.167	Ailuropoda_melanoleuca
ENSCVAG00000003195	-	77	38.345	ENSAMEG00000011151	MRTFA	72	42.969	Ailuropoda_melanoleuca
ENSCVAG00000003195	-	57	38.226	ENSACIG00000021331	mrtfab	73	42.128	Amphilophus_citrinellus
ENSCVAG00000003195	-	52	36.942	ENSACIG00000006315	mrtfba	71	34.458	Amphilophus_citrinellus
ENSCVAG00000003195	-	86	37.631	ENSAOCG00000004754	mrtfab	99	33.307	Amphiprion_ocellaris
ENSCVAG00000003195	-	86	37.313	ENSAPEG00000021018	mrtfab	99	34.078	Amphiprion_percula
ENSCVAG00000003195	-	52	33.937	ENSATEG00000004434	mrtfbb	56	32.137	Anabas_testudineus
ENSCVAG00000003195	-	98	36.828	ENSATEG00000005824	-	95	42.748	Anabas_testudineus
ENSCVAG00000003195	-	59	38.515	ENSATEG00000007179	mrtfab	90	34.177	Anabas_testudineus
ENSCVAG00000003195	-	50	33.391	ENSACAG00000017473	MYOCD	54	33.910	Anolis_carolinensis
ENSCVAG00000003195	-	60	42.063	ENSACAG00000005348	MRTFA	65	42.063	Anolis_carolinensis
ENSCVAG00000003195	-	51	37.755	ENSACAG00000003638	MRTFB	53	36.728	Anolis_carolinensis
ENSCVAG00000003195	-	52	31.980	ENSANAG00000037357	MYOCD	57	32.546	Aotus_nancymaae
ENSCVAG00000003195	-	59	35.894	ENSACLG00000018713	mrtfab	99	32.830	Astatotilapia_calliptera
ENSCVAG00000003195	-	93	49.605	ENSACLG00000012025	-	99	43.725	Astatotilapia_calliptera
ENSCVAG00000003195	-	66	53.279	ENSAMXG00000007612	mrtfab	83	53.279	Astyanax_mexicanus
ENSCVAG00000003195	-	79	39.172	ENSCJAG00000002850	MRTFA	62	41.860	Callithrix_jacchus
ENSCVAG00000003195	-	55	32.394	ENSCAFG00000017863	MYOCD	60	34.032	Canis_familiaris
ENSCVAG00000003195	-	50	30.915	ENSCAFG00020001034	MYOCD	58	32.286	Canis_lupus_dingo
ENSCVAG00000003195	-	62	42.969	ENSTSYG00000007397	MRTFA	76	42.636	Carlito_syrichta
ENSCVAG00000003195	-	51	33.564	ENSCAPG00000007773	MYOCD	57	32.650	Cavia_aperea
ENSCVAG00000003195	-	51	34.859	ENSCAPG00000014472	MRTFB	57	32.161	Cavia_aperea
ENSCVAG00000003195	-	51	33.391	ENSCPOG00000002421	MYOCD	57	32.479	Cavia_porcellus
ENSCVAG00000003195	-	79	39.650	ENSCCAG00000027355	MRTFA	70	59.375	Cebus_capucinus
ENSCVAG00000003195	-	79	40.284	ENSCATG00000044298	MRTFA	57	36.260	Cercocebus_atys
ENSCVAG00000003195	-	51	33.907	ENSCLAG00000009669	MYOCD	57	32.594	Chinchilla_lanigera
ENSCVAG00000003195	-	62	42.063	ENSCLAG00000016828	MRTFA	82	42.063	Chinchilla_lanigera
ENSCVAG00000003195	-	77	38.056	ENSCSAG00000005969	MRTFA	58	44.403	Chlorocebus_sabaeus
ENSCVAG00000003195	-	52	30.457	ENSCHOG00000003374	MYOCD	68	31.481	Choloepus_hoffmanni
ENSCVAG00000003195	-	53	37.179	ENSCPBG00000006634	MRTFB	56	36.275	Chrysemys_picta_bellii
ENSCVAG00000003195	-	52	35.403	ENSCPBG00000027766	MYOCD	60	33.725	Chrysemys_picta_bellii
ENSCVAG00000003195	-	79	39.490	ENSCANG00000035624	MRTFA	58	45.918	Colobus_angolensis_palliatus
ENSCVAG00000003195	-	62	41.860	ENSCGRG00001018160	Mkl1	72	44.444	Cricetulus_griseus_chok1gshd
ENSCVAG00000003195	-	62	41.860	ENSCGRG00000016476	Mkl1	72	44.444	Cricetulus_griseus_crigri
ENSCVAG00000003195	-	73	39.597	ENSDARG00000076229	mrtfab	97	33.689	Danio_rerio
ENSCVAG00000003195	-	71	40.299	ENSDARG00000075867	mrtfaa	86	38.705	Danio_rerio
ENSCVAG00000003195	-	65	42.400	ENSEASG00005002011	MRTFA	66	45.992	Equus_asinus_asinus
ENSCVAG00000003195	-	65	42.400	ENSECAG00000013950	MRTFA	69	42.400	Equus_caballus
ENSCVAG00000003195	-	52	38.259	ENSEEUG00000001036	MRTFB	52	36.799	Erinaceus_europaeus
ENSCVAG00000003195	-	69	44.231	ENSELUG00000007233	mrtfaa	76	57.377	Esox_lucius
ENSCVAG00000003195	-	52	34.687	ENSFCAG00000011071	MYOCD	61	34.506	Felis_catus
ENSCVAG00000003195	-	71	40.419	ENSFCAG00000004802	MRTFA	81	36.744	Felis_catus
ENSCVAG00000003195	-	52	31.188	ENSFALG00000011169	MYOCD	57	33.791	Ficedula_albicollis
ENSCVAG00000003195	-	62	42.857	ENSFALG00000012129	MRTFA	90	39.713	Ficedula_albicollis
ENSCVAG00000003195	-	51	33.220	ENSFDAG00000010479	MYOCD	56	32.373	Fukomys_damarensis
ENSCVAG00000003195	-	67	41.406	ENSFDAG00000006435	MRTFA	79	41.085	Fukomys_damarensis
ENSCVAG00000003195	-	100	62.622	ENSFHEG00000005266	-	100	62.533	Fundulus_heteroclitus
ENSCVAG00000003195	-	57	50.000	ENSGMOG00000017784	-	75	58.667	Gadus_morhua
ENSCVAG00000003195	-	62	40.310	ENSGALG00000012024	MRTFA	62	41.860	Gallus_gallus
ENSCVAG00000003195	-	96	49.767	ENSGAFG00000010084	-	100	50.233	Gambusia_affinis
ENSCVAG00000003195	-	52	33.788	ENSGAFG00000017947	mrtfbb	50	39.716	Gambusia_affinis
ENSCVAG00000003195	-	58	36.047	ENSGAFG00000008113	mrtfab	85	33.528	Gambusia_affinis
ENSCVAG00000003195	-	87	44.080	ENSGACG00000008394	-	98	43.185	Gasterosteus_aculeatus
ENSCVAG00000003195	-	79	36.542	ENSGACG00000005014	mrtfab	90	38.746	Gasterosteus_aculeatus
ENSCVAG00000003195	-	52	35.017	ENSGAGG00000022912	MYOCD	60	34.401	Gopherus_agassizii
ENSCVAG00000003195	-	69	38.095	ENSGAGG00000009658	MRTFA	65	41.085	Gopherus_agassizii
ENSCVAG00000003195	-	59	35.894	ENSHBUG00000023207	mrtfab	99	33.148	Haplochromis_burtoni
ENSCVAG00000003195	-	93	48.077	ENSHBUG00000013729	-	99	43.735	Haplochromis_burtoni
ENSCVAG00000003195	-	74	36.522	ENSHGLG00000009723	MRTFA	80	42.063	Heterocephalus_glaber_female
ENSCVAG00000003195	-	74	35.745	ENSHGLG00100016746	MRTFA	80	42.063	Heterocephalus_glaber_male
ENSCVAG00000003195	-	69	46.617	ENSHCOG00000009798	mrtfab	73	46.617	Hippocampus_comes
ENSCVAG00000003195	-	64	48.031	ENSIPUG00000000739	mrtfab	96	34.783	Ictalurus_punctatus
ENSCVAG00000003195	-	68	42.636	ENSSTOG00000002947	MRTFA	81	42.636	Ictidomys_tridecemlineatus
ENSCVAG00000003195	-	52	35.914	ENSSTOG00000013006	MRTFB	50	37.727	Ictidomys_tridecemlineatus
ENSCVAG00000003195	-	100	46.114	ENSKMAG00000016870	-	99	45.541	Kryptolebias_marmoratus
ENSCVAG00000003195	-	82	36.036	ENSKMAG00000002014	mrtfab	99	33.041	Kryptolebias_marmoratus
ENSCVAG00000003195	-	58	37.371	ENSLBEG00000002808	mrtfab	99	33.073	Labrus_bergylta
ENSCVAG00000003195	-	51	34.880	ENSLBEG00000023994	mrtfbb	59	32.743	Labrus_bergylta
ENSCVAG00000003195	-	65	35.266	ENSLACG00000005378	MRTFA	63	42.748	Latimeria_chalumnae
ENSCVAG00000003195	-	60	38.399	ENSLAFG00000030989	MRTFA	73	36.079	Loxodonta_africana
ENSCVAG00000003195	-	52	32.935	ENSLAFG00000012269	MYOCD	57	32.203	Loxodonta_africana
ENSCVAG00000003195	-	79	39.179	ENSMFAG00000046410	MRTFA	58	46.259	Macaca_fascicularis
ENSCVAG00000003195	-	79	39.269	ENSMMUG00000020411	MRTFA	56	46.218	Macaca_mulatta
ENSCVAG00000003195	-	79	39.269	ENSMNEG00000031219	MRTFA	58	46.259	Macaca_nemestrina
ENSCVAG00000003195	-	79	39.336	ENSMLEG00000036191	MRTFA	58	46.259	Mandrillus_leucophaeus
ENSCVAG00000003195	-	86	37.106	ENSMAMG00000003242	mrtfab	84	45.714	Mastacembelus_armatus
ENSCVAG00000003195	-	92	40.085	ENSMAMG00000005317	-	99	42.486	Mastacembelus_armatus
ENSCVAG00000003195	-	93	49.605	ENSMZEG00005006274	-	99	43.760	Maylandia_zebra
ENSCVAG00000003195	-	59	35.894	ENSMZEG00005028077	mrtfab	99	32.909	Maylandia_zebra
ENSCVAG00000003195	-	52	32.712	ENSMGAG00000002098	MYOCD	57	32.378	Meleagris_gallopavo
ENSCVAG00000003195	-	62	41.406	ENSMICG00000005671	MRTFA	73	41.085	Microcebus_murinus
ENSCVAG00000003195	-	55	39.844	ENSMALG00000009693	mrtfab	94	33.028	Monopterus_albus
ENSCVAG00000003195	-	67	38.435	ENSMLUG00000005421	MRTFA	72	42.188	Myotis_lucifugus
ENSCVAG00000003195	-	85	48.271	ENSNBRG00000005688	-	95	55.882	Neolamprologus_brichardi
ENSCVAG00000003195	-	86	35.920	ENSNBRG00000004360	mrtfab	99	33.438	Neolamprologus_brichardi
ENSCVAG00000003195	-	76	39.504	ENSNLEG00000015359	MRTFA	77	43.478	Nomascus_leucogenys
ENSCVAG00000003195	-	77	37.062	ENSMEUG00000001042	MRTFA	60	45.038	Notamacropus_eugenii
ENSCVAG00000003195	-	50	38.399	ENSODEG00000012960	MRTFA	72	36.842	Octodon_degus
ENSCVAG00000003195	-	52	38.655	ENSODEG00000002623	MRTFB	52	38.026	Octodon_degus
ENSCVAG00000003195	-	70	38.511	ENSONIG00000019711	mrtfab	91	40.000	Oreochromis_niloticus
ENSCVAG00000003195	-	79	51.087	ENSONIG00000007040	-	99	41.762	Oreochromis_niloticus
ENSCVAG00000003195	-	100	42.150	ENSORLG00000013273	-	99	40.991	Oryzias_latipes
ENSCVAG00000003195	-	71	41.007	ENSORLG00020007944	mrtfab	94	31.974	Oryzias_latipes_hni
ENSCVAG00000003195	-	100	42.047	ENSORLG00020009919	-	99	41.201	Oryzias_latipes_hni
ENSCVAG00000003195	-	100	41.540	ENSORLG00015020937	-	99	40.948	Oryzias_latipes_hsok
ENSCVAG00000003195	-	100	41.858	ENSOMEG00000022122	-	99	43.430	Oryzias_melastigma
ENSCVAG00000003195	-	79	38.376	ENSPPAG00000020762	MRTFA	82	46.341	Pan_paniscus
ENSCVAG00000003195	-	52	34.401	ENSPPRG00000013106	MYOCD	61	34.673	Panthera_pardus
ENSCVAG00000003195	-	79	39.151	ENSPTRG00000014409	MRTFA	59	46.259	Pan_troglodytes
ENSCVAG00000003195	-	52	32.383	ENSPANG00000023749	MYOCD	57	32.884	Papio_anubis
ENSCVAG00000003195	-	79	39.179	ENSPANG00000024733	MRTFA	58	46.259	Papio_anubis
ENSCVAG00000003195	-	83	41.109	ENSPKIG00000001046	-	90	40.254	Paramormyrops_kingsleyae
ENSCVAG00000003195	-	65	49.587	ENSPKIG00000004053	mrtfab	67	49.587	Paramormyrops_kingsleyae
ENSCVAG00000003195	-	52	38.255	ENSPSIG00000006962	MRTFB	54	37.770	Pelodiscus_sinensis
ENSCVAG00000003195	-	62	47.107	ENSPMGG00000007329	mrtfab	78	47.107	Periophthalmus_magnuspinnatus
ENSCVAG00000003195	-	62	40.458	ENSPCIG00000020323	MRTFA	82	39.735	Phascolarctos_cinereus
ENSCVAG00000003195	-	52	32.554	ENSPCIG00000009361	MYOCD	57	30.579	Phascolarctos_cinereus
ENSCVAG00000003195	-	55	37.366	ENSPFOG00000017227	mrtfab	95	34.868	Poecilia_formosa
ENSCVAG00000003195	-	82	37.213	ENSPLAG00000001889	mrtfab	95	34.491	Poecilia_latipinna
ENSCVAG00000003195	-	76	52.989	ENSPMEG00000005523	-	98	53.224	Poecilia_mexicana
ENSCVAG00000003195	-	57	36.297	ENSPMEG00000003751	mrtfab	99	34.889	Poecilia_mexicana
ENSCVAG00000003195	-	82	37.325	ENSPREG00000021039	mrtfab	99	34.075	Poecilia_reticulata
ENSCVAG00000003195	-	100	54.047	ENSPREG00000020201	-	100	53.839	Poecilia_reticulata
ENSCVAG00000003195	-	56	59.375	ENSPCAG00000004864	MRTFA	72	59.375	Procavia_capensis
ENSCVAG00000003195	-	55	32.901	ENSPCOG00000028319	MYOCD	78	32.805	Propithecus_coquereli
ENSCVAG00000003195	-	71	39.110	ENSPCOG00000018452	MRTFA	73	41.085	Propithecus_coquereli
ENSCVAG00000003195	-	59	37.725	ENSPNYG00000003895	mrtfab	94	36.163	Pundamilia_nyererei
ENSCVAG00000003195	-	93	47.940	ENSPNYG00000019235	-	99	42.694	Pundamilia_nyererei
ENSCVAG00000003195	-	58	36.024	ENSPNAG00000011420	mrtfba	50	44.286	Pygocentrus_nattereri
ENSCVAG00000003195	-	74	52.066	ENSPNAG00000002883	mrtfab	83	52.066	Pygocentrus_nattereri
ENSCVAG00000003195	-	79	39.336	ENSRBIG00000036684	MRTFA	58	45.918	Rhinopithecus_bieti
ENSCVAG00000003195	-	79	39.557	ENSRROG00000042362	MRTFA	89	39.185	Rhinopithecus_roxellana
ENSCVAG00000003195	-	52	31.395	ENSRROG00000030552	MYOCD	58	31.544	Rhinopithecus_roxellana
ENSCVAG00000003195	-	77	39.895	ENSSBOG00000019487	MRTFA	55	37.209	Saimiri_boliviensis_boliviensis
ENSCVAG00000003195	-	71	40.887	ENSSFOG00015004553	mrtfab	68	50.806	Scleropages_formosus
ENSCVAG00000003195	-	76	39.377	ENSSFOG00015011195	mkl1	84	48.438	Scleropages_formosus
ENSCVAG00000003195	-	52	31.570	ENSSMAG00000002501	MYOCD	59	33.735	Scophthalmus_maximus
ENSCVAG00000003195	-	51	32.660	ENSSPUG00000006103	MYOCD	60	32.945	Sphenodon_punctatus
ENSCVAG00000003195	-	70	44.286	ENSSPAG00000005433	mrtfab	84	45.714	Stegastes_partitus
ENSCVAG00000003195	-	94	49.559	ENSSPAG00000012935	-	99	44.612	Stegastes_partitus
ENSCVAG00000003195	-	77	38.540	ENSTNIG00000012948	mrtfab	99	35.160	Tetraodon_nigroviridis
ENSCVAG00000003195	-	50	30.465	ENSUAMG00000008231	MYOCD	59	32.286	Ursus_americanus
ENSCVAG00000003195	-	67	38.786	ENSUAMG00000004438	MRTFA	72	42.188	Ursus_americanus
ENSCVAG00000003195	-	55	32.394	ENSVVUG00000029888	MYOCD	58	33.923	Vulpes_vulpes
ENSCVAG00000003195	-	62	44.800	ENSXETG00000022963	mrtfa	63	44.800	Xenopus_tropicalis
ENSCVAG00000003195	-	72	37.342	ENSXETG00000010993	mrtfb	68	37.143	Xenopus_tropicalis
ENSCVAG00000003195	-	51	35.112	ENSXETG00000011035	myocd	55	33.507	Xenopus_tropicalis
ENSCVAG00000003195	-	75	38.596	ENSXMAG00000009671	mrtfab	97	33.413	Xiphophorus_maculatus
ENSCVAG00000003195	-	52	33.558	ENSXMAG00000000094	mrtfbb	50	40.636	Xiphophorus_maculatus
ENSCVAG00000003195	-	96	53.631	ENSXMAG00000001274	-	100	53.724	Xiphophorus_maculatus