EuRBPDB

Description

Ensembl ID: ENSCVAG00000003223 (Gene tree)
Gene ID: 107086623
Gene Symbol: pprc1
Alias: cb478|sb:cb478|wu:fb72d09|wu:fj86g08
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11587 bases
Position: chrKL652657.1:706867-718453
Accession: 107086623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002154	RRM_1	PF00076.22	1.6e-07	1	1
ENSCVAP00000002147	RRM_1	PF00076.22	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012203	-	4285	XM_015377699	ENSCVAP00000002147	1301 (aa)	XP_015233185	-
ENSCVAT00000012194	-	4363	-	ENSCVAP00000002154	1194 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003223	pprc1	66	78.750	ENSACIG00000022532	pprc1	75	50.716	Amphilophus_citrinellus
ENSCVAG00000003223	pprc1	87	73.780	ENSLBEG00000015862	pprc1	99	74.375	Labrus_bergylta
ENSCVAG00000003223	pprc1	81	49.909	ENSMALG00000016857	pprc1	81	49.638	Monopterus_albus
ENSCVAG00000003223	pprc1	100	69.196	ENSPFOG00000014566	pprc1	81	65.831	Poecilia_formosa
ENSCVAG00000003223	pprc1	100	69.149	ENSPLAG00000010056	pprc1	81	65.924	Poecilia_latipinna
ENSCVAG00000003223	pprc1	100	67.906	ENSPMEG00000008399	pprc1	82	65.645	Poecilia_mexicana
ENSCVAG00000003223	pprc1	81	79.268	ENSPREG00000020657	pprc1	73	85.625	Poecilia_reticulata
ENSCVAG00000003223	pprc1	100	49.662	ENSTRUG00000011524	pprc1	81	46.042	Takifugu_rubripes
ENSCVAG00000003223	pprc1	51	71.756	ENSXETG00000001712	pprc1	53	74.312	Xenopus_tropicalis