EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000003253 (Gene tree)
Gene ID: 107104953
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5689 bases
Position: chrKL654473.1:2931-8619
Accession: 107104953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000021304	Ribosom_S12_S23	PF00164.25	4.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012146	-	1168	XM_015405066	ENSCVAP00000021304	143 (aa)	XP_015260552	UPI000742734A

Gene Model

Click here to download ENSCVAG00000003253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000003253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000003253	si:dkey-17e16.10	52	40.244	ENSCVAG00000003656	rps23	61	40.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSG00000128626	MRPS12	80	79.091	Homo_sapiens
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSAPOG00000005047	si:dkey-17e16.10	100	90.909	Acanthochromis_polyacanthus
ENSCVAG00000003253	si:dkey-17e16.10	85	75.000	ENSAMEG00000008722	MRPS12	92	75.000	Ailuropoda_melanoleuca
ENSCVAG00000003253	si:dkey-17e16.10	100	90.210	ENSACIG00000016095	si:dkey-17e16.10	100	90.210	Amphilophus_citrinellus
ENSCVAG00000003253	si:dkey-17e16.10	100	90.210	ENSAOCG00000018530	si:dkey-17e16.10	100	90.210	Amphiprion_ocellaris
ENSCVAG00000003253	si:dkey-17e16.10	100	89.510	ENSAPEG00000019785	si:dkey-17e16.10	100	89.510	Amphiprion_percula
ENSCVAG00000003253	si:dkey-17e16.10	100	90.210	ENSATEG00000018924	si:dkey-17e16.10	100	90.210	Anabas_testudineus
ENSCVAG00000003253	si:dkey-17e16.10	76	74.312	ENSAPLG00000014350	-	73	74.312	Anas_platyrhynchos
ENSCVAG00000003253	si:dkey-17e16.10	77	81.818	ENSAPLG00000011925	-	79	81.818	Anas_platyrhynchos
ENSCVAG00000003253	si:dkey-17e16.10	77	83.636	ENSACAG00000003829	MRPS12	76	83.636	Anolis_carolinensis
ENSCVAG00000003253	si:dkey-17e16.10	78	80.180	ENSANAG00000033654	MRPS12	80	80.180	Aotus_nancymaae
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSACLG00000013979	si:dkey-17e16.10	95	92.308	Astatotilapia_calliptera
ENSCVAG00000003253	si:dkey-17e16.10	100	71.918	ENSAMXG00000025945	si:dkey-17e16.10	100	71.918	Astyanax_mexicanus
ENSCVAG00000003253	si:dkey-17e16.10	81	78.448	ENSBTAG00000001782	MRPS12	83	78.448	Bos_taurus
ENSCVAG00000003253	si:dkey-17e16.10	94	46.377	WBGene00011391	mrps-12	88	46.377	Caenorhabditis_elegans
ENSCVAG00000003253	si:dkey-17e16.10	78	80.180	ENSCJAG00000043176	MRPS12	80	80.180	Callithrix_jacchus
ENSCVAG00000003253	si:dkey-17e16.10	83	79.832	ENSCAFG00000005623	MRPS12	83	79.832	Canis_familiaris
ENSCVAG00000003253	si:dkey-17e16.10	83	79.832	ENSCAFG00020016784	MRPS12	83	79.832	Canis_lupus_dingo
ENSCVAG00000003253	si:dkey-17e16.10	81	78.448	ENSCHIG00000013852	MRPS12	83	78.448	Capra_hircus
ENSCVAG00000003253	si:dkey-17e16.10	78	81.250	ENSTSYG00000009568	MRPS12	81	81.250	Carlito_syrichta
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSCAPG00000009543	MRPS12	83	80.531	Cavia_aperea
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSCPOG00000035217	MRPS12	81	80.531	Cavia_porcellus
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSCCAG00000035388	MRPS12	80	79.091	Cebus_capucinus
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSCATG00000038438	MRPS12	80	79.279	Cercocebus_atys
ENSCVAG00000003253	si:dkey-17e16.10	78	80.357	ENSCLAG00000013286	MRPS12	81	80.357	Chinchilla_lanigera
ENSCVAG00000003253	si:dkey-17e16.10	77	80.000	ENSCSAG00000003929	MRPS12	79	80.000	Chlorocebus_sabaeus
ENSCVAG00000003253	si:dkey-17e16.10	60	83.721	ENSCHOG00000008451	MRPS12	62	83.721	Choloepus_hoffmanni
ENSCVAG00000003253	si:dkey-17e16.10	82	82.051	ENSCPBG00000018941	MRPS12	88	71.739	Chrysemys_picta_bellii
ENSCVAG00000003253	si:dkey-17e16.10	59	68.235	ENSCING00000014236	-	64	53.659	Ciona_intestinalis
ENSCVAG00000003253	si:dkey-17e16.10	98	43.827	ENSCSAVG00000008777	-	85	43.827	Ciona_savignyi
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSCANG00000003652	MRPS12	80	79.279	Colobus_angolensis_palliatus
ENSCVAG00000003253	si:dkey-17e16.10	82	77.311	ENSCGRG00001018968	Mrps12	86	77.311	Cricetulus_griseus_chok1gshd
ENSCVAG00000003253	si:dkey-17e16.10	82	77.311	ENSCGRG00000007113	Mrps12	86	77.311	Cricetulus_griseus_crigri
ENSCVAG00000003253	si:dkey-17e16.10	100	86.713	ENSCSEG00000001174	si:dkey-17e16.10	100	86.713	Cynoglossus_semilaevis
ENSCVAG00000003253	si:dkey-17e16.10	100	77.622	ENSDARG00000089836	MRPS12	100	77.622	Danio_rerio
ENSCVAG00000003253	si:dkey-17e16.10	79	82.301	ENSDNOG00000003918	MRPS12	81	82.301	Dasypus_novemcinctus
ENSCVAG00000003253	si:dkey-17e16.10	80	78.070	ENSDORG00000001544	Mrps12	82	78.070	Dipodomys_ordii
ENSCVAG00000003253	si:dkey-17e16.10	96	56.429	FBgn0003714	tko	98	56.429	Drosophila_melanogaster
ENSCVAG00000003253	si:dkey-17e16.10	79	82.301	ENSETEG00000017985	MRPS12	81	82.301	Echinops_telfairi
ENSCVAG00000003253	si:dkey-17e16.10	78	84.821	ENSEBUG00000003529	si:dkey-17e16.10	64	84.821	Eptatretus_burgeri
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSEASG00005019736	MRPS12	81	81.416	Equus_asinus_asinus
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSECAG00000013794	MRPS12	81	81.416	Equus_caballus
ENSCVAG00000003253	si:dkey-17e16.10	50	71.831	ENSEEUG00000013868	MRPS12	75	71.831	Erinaceus_europaeus
ENSCVAG00000003253	si:dkey-17e16.10	99	87.324	ENSELUG00000014973	si:dkey-17e16.10	99	87.324	Esox_lucius
ENSCVAG00000003253	si:dkey-17e16.10	79	78.761	ENSFCAG00000014573	MRPS12	81	78.761	Felis_catus
ENSCVAG00000003253	si:dkey-17e16.10	76	77.064	ENSFALG00000015276	MRPS12	95	77.064	Ficedula_albicollis
ENSCVAG00000003253	si:dkey-17e16.10	79	77.876	ENSFDAG00000008482	MRPS12	81	77.876	Fukomys_damarensis
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSFHEG00000004575	si:dkey-17e16.10	100	92.308	Fundulus_heteroclitus
ENSCVAG00000003253	si:dkey-17e16.10	78	97.297	ENSGMOG00000020611	si:dkey-17e16.10	100	97.297	Gadus_morhua
ENSCVAG00000003253	si:dkey-17e16.10	91	72.388	ENSGALG00000038667	MRPS12	98	73.485	Gallus_gallus
ENSCVAG00000003253	si:dkey-17e16.10	99	92.199	ENSGAFG00000007521	si:dkey-17e16.10	99	92.199	Gambusia_affinis
ENSCVAG00000003253	si:dkey-17e16.10	99	77.305	ENSGACG00000003011	si:dkey-17e16.10	100	95.495	Gasterosteus_aculeatus
ENSCVAG00000003253	si:dkey-17e16.10	81	83.621	ENSGAGG00000009748	MRPS12	74	83.621	Gopherus_agassizii
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSGGOG00000002500	MRPS12	80	79.091	Gorilla_gorilla
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSHBUG00000014480	si:dkey-17e16.10	100	92.308	Haplochromis_burtoni
ENSCVAG00000003253	si:dkey-17e16.10	80	75.439	ENSHGLG00000014942	MRPS12	81	75.439	Heterocephalus_glaber_female
ENSCVAG00000003253	si:dkey-17e16.10	80	75.439	ENSHGLG00100017710	MRPS12	81	75.439	Heterocephalus_glaber_male
ENSCVAG00000003253	si:dkey-17e16.10	100	82.639	ENSHCOG00000010444	si:dkey-17e16.10	96	82.639	Hippocampus_comes
ENSCVAG00000003253	si:dkey-17e16.10	100	84.615	ENSIPUG00000024651	MRPS12	100	84.615	Ictalurus_punctatus
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSSTOG00000009006	MRPS12	81	81.416	Ictidomys_tridecemlineatus
ENSCVAG00000003253	si:dkey-17e16.10	79	77.876	ENSJJAG00000017837	Mrps12	81	77.876	Jaculus_jaculus
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSKMAG00000007949	si:dkey-17e16.10	91	90.909	Kryptolebias_marmoratus
ENSCVAG00000003253	si:dkey-17e16.10	96	83.571	ENSLBEG00000001112	si:dkey-17e16.10	100	83.571	Labrus_bergylta
ENSCVAG00000003253	si:dkey-17e16.10	79	87.611	ENSLACG00000018393	MRPS12	71	87.611	Latimeria_chalumnae
ENSCVAG00000003253	si:dkey-17e16.10	100	71.429	ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	Lepisosteus_oculatus
ENSCVAG00000003253	si:dkey-17e16.10	79	76.991	ENSLAFG00000022140	MRPS12	81	76.991	Loxodonta_africana
ENSCVAG00000003253	si:dkey-17e16.10	78	80.180	ENSMFAG00000044563	MRPS12	80	80.180	Macaca_fascicularis
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSMNEG00000040379	MRPS12	80	79.279	Macaca_nemestrina
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSMLEG00000036963	MRPS12	80	79.279	Mandrillus_leucophaeus
ENSCVAG00000003253	si:dkey-17e16.10	100	88.112	ENSMAMG00000017962	si:dkey-17e16.10	100	88.112	Mastacembelus_armatus
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSMZEG00005017336	si:dkey-17e16.10	100	92.308	Maylandia_zebra
ENSCVAG00000003253	si:dkey-17e16.10	78	81.982	ENSMGAG00000005414	MRPS12	78	81.982	Meleagris_gallopavo
ENSCVAG00000003253	si:dkey-17e16.10	57	78.313	ENSMAUG00000019146	Mrps12	81	78.313	Mesocricetus_auratus
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSMICG00000045111	MRPS12	81	80.531	Microcebus_murinus
ENSCVAG00000003253	si:dkey-17e16.10	81	79.661	ENSMOCG00000012666	Mrps12	88	79.661	Microtus_ochrogaster
ENSCVAG00000003253	si:dkey-17e16.10	78	94.643	ENSMMOG00000010803	si:dkey-17e16.10	77	94.643	Mola_mola
ENSCVAG00000003253	si:dkey-17e16.10	96	67.153	ENSMODG00000013431	MRPS12	92	67.153	Monodelphis_domestica
ENSCVAG00000003253	si:dkey-17e16.10	100	90.210	ENSMALG00000004190	si:dkey-17e16.10	100	90.210	Monopterus_albus
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	MGP_CAROLIEiJ_G0029457	Mrps12	99	72.581	Mus_caroli
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSMUSG00000045948	Mrps12	99	72.581	Mus_musculus
ENSCVAG00000003253	si:dkey-17e16.10	79	79.646	MGP_PahariEiJ_G0012691	Mrps12	99	71.774	Mus_pahari
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	MGP_SPRETEiJ_G0030553	Mrps12	99	72.581	Mus_spretus
ENSCVAG00000003253	si:dkey-17e16.10	80	80.870	ENSMPUG00000017750	MRPS12	86	80.870	Mustela_putorius_furo
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSMLUG00000006076	MRPS12	81	80.531	Myotis_lucifugus
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSNGAG00000022099	Mrps12	81	81.416	Nannospalax_galili
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSNBRG00000007244	si:dkey-17e16.10	100	92.308	Neolamprologus_brichardi
ENSCVAG00000003253	si:dkey-17e16.10	78	73.874	ENSMEUG00000005688	MRPS12	99	73.874	Notamacropus_eugenii
ENSCVAG00000003253	si:dkey-17e16.10	97	69.718	ENSODEG00000016161	MRPS12	99	69.718	Octodon_degus
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSONIG00000002022	si:dkey-17e16.10	100	91.608	Oreochromis_niloticus
ENSCVAG00000003253	si:dkey-17e16.10	78	80.357	ENSOCUG00000000689	MRPS12	81	80.357	Oryctolagus_cuniculus
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSORLG00000007040	si:dkey-17e16.10	100	90.909	Oryzias_latipes
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSORLG00020011268	MRPS12	100	90.909	Oryzias_latipes_hni
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSORLG00015009378	MRPS12	100	90.909	Oryzias_latipes_hsok
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSOMEG00000001427	si:dkey-17e16.10	100	91.608	Oryzias_melastigma
ENSCVAG00000003253	si:dkey-17e16.10	79	73.451	ENSOGAG00000025634	-	81	73.451	Otolemur_garnettii
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSOGAG00000008295	-	81	81.416	Otolemur_garnettii
ENSCVAG00000003253	si:dkey-17e16.10	81	78.448	ENSOARG00000005927	MRPS12	83	78.448	Ovis_aries
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSPPAG00000041637	MRPS12	80	79.091	Pan_paniscus
ENSCVAG00000003253	si:dkey-17e16.10	79	78.761	ENSPPRG00000011742	MRPS12	81	78.761	Panthera_pardus
ENSCVAG00000003253	si:dkey-17e16.10	62	82.955	ENSPTIG00000008427	MRPS12	99	69.106	Panthera_tigris_altaica
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSPTRG00000010948	MRPS12	80	79.091	Pan_troglodytes
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSPANG00000021673	MRPS12	80	79.279	Papio_anubis
ENSCVAG00000003253	si:dkey-17e16.10	100	79.720	ENSPKIG00000006716	si:dkey-17e16.10	100	79.720	Paramormyrops_kingsleyae
ENSCVAG00000003253	si:dkey-17e16.10	82	83.761	ENSPSIG00000014383	MRPS12	76	83.761	Pelodiscus_sinensis
ENSCVAG00000003253	si:dkey-17e16.10	100	80.556	ENSPMGG00000009631	si:dkey-17e16.10	100	80.556	Periophthalmus_magnuspinnatus
ENSCVAG00000003253	si:dkey-17e16.10	82	78.992	ENSPEMG00000016700	Mrps12	86	78.992	Peromyscus_maniculatus_bairdii
ENSCVAG00000003253	si:dkey-17e16.10	80	74.783	ENSPMAG00000008051	si:dkey-17e16.10	74	74.783	Petromyzon_marinus
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSPCIG00000010531	-	78	79.091	Phascolarctos_cinereus
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSPFOG00000018863	si:dkey-17e16.10	100	91.608	Poecilia_formosa
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSPLAG00000008933	si:dkey-17e16.10	100	91.608	Poecilia_latipinna
ENSCVAG00000003253	si:dkey-17e16.10	100	90.909	ENSPMEG00000005155	si:dkey-17e16.10	95	90.909	Poecilia_mexicana
ENSCVAG00000003253	si:dkey-17e16.10	99	90.071	ENSPREG00000014123	si:dkey-17e16.10	95	90.071	Poecilia_reticulata
ENSCVAG00000003253	si:dkey-17e16.10	77	79.091	ENSPPYG00000009950	MRPS12	80	79.091	Pongo_abelii
ENSCVAG00000003253	si:dkey-17e16.10	79	78.761	ENSPCAG00000010853	MRPS12	82	78.761	Procavia_capensis
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSPCOG00000020370	MRPS12	81	80.531	Propithecus_coquereli
ENSCVAG00000003253	si:dkey-17e16.10	79	76.106	ENSPVAG00000011605	MRPS12	81	76.106	Pteropus_vampyrus
ENSCVAG00000003253	si:dkey-17e16.10	100	92.308	ENSPNYG00000015506	si:dkey-17e16.10	95	92.308	Pundamilia_nyererei
ENSCVAG00000003253	si:dkey-17e16.10	79	89.381	ENSPNAG00000016315	si:dkey-17e16.10	76	89.381	Pygocentrus_nattereri
ENSCVAG00000003253	si:dkey-17e16.10	79	81.416	ENSRNOG00000019949	Mrps12	81	81.416	Rattus_norvegicus
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSRBIG00000029741	MRPS12	80	79.279	Rhinopithecus_bieti
ENSCVAG00000003253	si:dkey-17e16.10	78	79.279	ENSRROG00000030787	MRPS12	80	79.279	Rhinopithecus_roxellana
ENSCVAG00000003253	si:dkey-17e16.10	78	80.180	ENSSBOG00000025707	MRPS12	80	80.180	Saimiri_boliviensis_boliviensis
ENSCVAG00000003253	si:dkey-17e16.10	100	75.524	ENSSFOG00015018102	mrps12	100	75.524	Scleropages_formosus
ENSCVAG00000003253	si:dkey-17e16.10	100	88.811	ENSSMAG00000004249	si:dkey-17e16.10	100	88.811	Scophthalmus_maximus
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSSDUG00000020424	si:dkey-17e16.10	99	91.608	Seriola_dumerili
ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	ENSSLDG00000016320	si:dkey-17e16.10	99	91.608	Seriola_lalandi_dorsalis
ENSCVAG00000003253	si:dkey-17e16.10	81	77.586	ENSSARG00000006985	MRPS12	83	77.586	Sorex_araneus
ENSCVAG00000003253	si:dkey-17e16.10	98	70.000	ENSSPUG00000004675	MRPS12	82	70.000	Sphenodon_punctatus
ENSCVAG00000003253	si:dkey-17e16.10	100	88.811	ENSSPAG00000012951	si:dkey-17e16.10	100	88.811	Stegastes_partitus
ENSCVAG00000003253	si:dkey-17e16.10	81	79.310	ENSSSCG00000031860	MRPS12	91	79.310	Sus_scrofa
ENSCVAG00000003253	si:dkey-17e16.10	77	77.273	ENSTGUG00000016491	MRPS12	100	77.273	Taeniopygia_guttata
ENSCVAG00000003253	si:dkey-17e16.10	93	82.707	ENSTRUG00000017342	si:dkey-17e16.10	94	82.707	Takifugu_rubripes
ENSCVAG00000003253	si:dkey-17e16.10	92	82.482	ENSTNIG00000004898	si:dkey-17e16.10	100	82.482	Tetraodon_nigroviridis
ENSCVAG00000003253	si:dkey-17e16.10	79	80.531	ENSTBEG00000001288	MRPS12	81	80.531	Tupaia_belangeri
ENSCVAG00000003253	si:dkey-17e16.10	81	78.448	ENSTTRG00000011794	MRPS12	83	78.448	Tursiops_truncatus
ENSCVAG00000003253	si:dkey-17e16.10	79	77.876	ENSUAMG00000011626	MRPS12	81	77.876	Ursus_americanus
ENSCVAG00000003253	si:dkey-17e16.10	79	79.646	ENSUMAG00000019235	MRPS12	81	79.646	Ursus_maritimus
ENSCVAG00000003253	si:dkey-17e16.10	83	78.992	ENSVVUG00000006433	MRPS12	58	78.992	Vulpes_vulpes
ENSCVAG00000003253	si:dkey-17e16.10	90	73.684	ENSXETG00000005326	mrps12	89	73.684	Xenopus_tropicalis
ENSCVAG00000003253	si:dkey-17e16.10	99	92.908	ENSXCOG00000020766	si:dkey-17e16.10	95	92.908	Xiphophorus_couchianus
ENSCVAG00000003253	si:dkey-17e16.10	99	92.908	ENSXMAG00000027119	si:dkey-17e16.10	99	92.908	Xiphophorus_maculatus